Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-1024
         (644 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

M29490-1|AAA27725.1|  109|Apis mellifera protein ( Bee homeobox-...    26   0.36 
M29489-1|AAA27724.1|  109|Apis mellifera protein ( Bee homeobox-...    25   0.63 
M29494-1|AAA27729.1|   74|Apis mellifera protein ( Bee homeobox-...    25   0.83 
DQ869051-1|ABJ09598.1|  581|Apis mellifera pyrokinin-like recept...    25   0.83 
M29493-1|AAA27728.1|   74|Apis mellifera protein ( Bee homeobox-...    23   2.5  
AJ276511-1|CAC06383.1|  352|Apis mellifera Antennapedia protein ...    23   3.3  
AB167961-1|BAD51404.1|  554|Apis mellifera E74 protein.                22   4.4  
M29488-1|AAA27723.1|   86|Apis mellifera protein ( Bee homeobox-...    22   5.8  
DQ342041-1|ABC69933.1|  828|Apis mellifera STIP protein.               22   5.8  
AB022908-1|BAA86909.1|  493|Apis mellifera amylase protein.            21   7.7  

>M29490-1|AAA27725.1|  109|Apis mellifera protein ( Bee
           homeobox-containing gene,partial cds, clone E30. ).
          Length = 109

 Score = 25.8 bits (54), Expect = 0.36
 Identities = 14/48 (29%), Positives = 24/48 (50%)
 Frame = +2

Query: 482 SVKILKRWLYDHRYNAYPSDAEKIALSQEANLSVLQVCNWFINARRRI 625
           S + L R   +   N Y ++  +  LS++  L+  Q+  WF N R +I
Sbjct: 28  SAEQLARLKREFAENRYLTERRRQQLSRDLGLTEAQIKIWFQNKRAKI 75


>M29489-1|AAA27724.1|  109|Apis mellifera protein ( Bee
           homeobox-containing gene,partial cds, clone E60. ).
          Length = 109

 Score = 25.0 bits (52), Expect = 0.63
 Identities = 11/34 (32%), Positives = 19/34 (55%)
 Frame = +2

Query: 524 NAYPSDAEKIALSQEANLSVLQVCNWFINARRRI 625
           N Y ++  +  LS++  L+  Q+  WF N R +I
Sbjct: 42  NRYLTERRRQQLSRDLGLNEAQIKIWFQNKRAKI 75


>M29494-1|AAA27729.1|   74|Apis mellifera protein ( Bee
           homeobox-containing gene,partial cds, clone H15. ).
          Length = 74

 Score = 24.6 bits (51), Expect = 0.83
 Identities = 11/42 (26%), Positives = 21/42 (50%)
 Frame = +2

Query: 512 DHRYNAYPSDAEKIALSQEANLSVLQVCNWFINARRRILPEM 637
           +  YN Y +   +I ++    L+  Q+  WF N R ++  E+
Sbjct: 26  EFHYNHYLTRRRRIEIAHALCLTERQIKIWFQNRRMKLKKEL 67


>DQ869051-1|ABJ09598.1|  581|Apis mellifera pyrokinin-like receptor
           2 protein.
          Length = 581

 Score = 24.6 bits (51), Expect = 0.83
 Identities = 10/34 (29%), Positives = 16/34 (47%)
 Frame = +3

Query: 87  YVLKKSNSCGQWSRTKTKCLHGLSDQLCYLPRPV 188
           + L   N CG+WS  K++    +   L   PR +
Sbjct: 359 FKLMLPNCCGKWSSQKSEPRRSIYSSLLRYPRSI 392


>M29493-1|AAA27728.1|   74|Apis mellifera protein ( Bee
           homeobox-containing gene,partial cds, clone H90. ).
          Length = 74

 Score = 23.0 bits (47), Expect = 2.5
 Identities = 12/44 (27%), Positives = 20/44 (45%)
 Frame = +2

Query: 512 DHRYNAYPSDAEKIALSQEANLSVLQVCNWFINARRRILPEMIR 643
           +  YN Y +   +I ++    L+  Q+  WF N R +   E  R
Sbjct: 26  EFHYNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKENAR 69


>AJ276511-1|CAC06383.1|  352|Apis mellifera Antennapedia protein
           protein.
          Length = 352

 Score = 22.6 bits (46), Expect = 3.3
 Identities = 10/37 (27%), Positives = 18/37 (48%)
 Frame = +2

Query: 512 DHRYNAYPSDAEKIALSQEANLSVLQVCNWFINARRR 622
           +  YN Y +   +I ++    L+  Q+  WF N R +
Sbjct: 288 EFHYNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMK 324


>AB167961-1|BAD51404.1|  554|Apis mellifera E74 protein.
          Length = 554

 Score = 22.2 bits (45), Expect = 4.4
 Identities = 9/26 (34%), Positives = 12/26 (46%)
 Frame = +2

Query: 356 ESGTDGEADRSRRQTILHGVSGMQPQ 433
           E G+ G    S    +LHG+    PQ
Sbjct: 175 EPGSTGTTTTSTGTRLLHGILSQHPQ 200


>M29488-1|AAA27723.1|   86|Apis mellifera protein ( Bee
           homeobox-containing gene,partial cds, clone H55. ).
          Length = 86

 Score = 21.8 bits (44), Expect = 5.8
 Identities = 11/58 (18%), Positives = 29/58 (50%)
 Frame = +2

Query: 449 IRKRRGNLAKHSVKILKRWLYDHRYNAYPSDAEKIALSQEANLSVLQVCNWFINARRR 622
           ++++R +  ++    L++   +  +N Y +   +I ++    L+  Q+  WF N R +
Sbjct: 8   VKRQRTSYTRYQTLELEK---EFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMK 62


>DQ342041-1|ABC69933.1|  828|Apis mellifera STIP protein.
          Length = 828

 Score = 21.8 bits (44), Expect = 5.8
 Identities = 10/17 (58%), Positives = 12/17 (70%)
 Frame = -2

Query: 433 LGLHAGDSVEDGLPARP 383
           LG+ A DS E+ L ARP
Sbjct: 36  LGIWADDSDEEELSARP 52


>AB022908-1|BAA86909.1|  493|Apis mellifera amylase protein.
          Length = 493

 Score = 21.4 bits (43), Expect = 7.7
 Identities = 9/21 (42%), Positives = 11/21 (52%)
 Frame = -3

Query: 174 GNIVDHSIHANTLFWFWTTDH 112
           GNI+  SIH N     W  +H
Sbjct: 362 GNILSPSIHDNICSNGWICEH 382


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 185,677
Number of Sequences: 438
Number of extensions: 3885
Number of successful extensions: 14
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 19438227
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)