Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-1022
         (648 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    27   0.18 
AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosin...    24   0.94 
AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    23   1.6  
AM292349-1|CAL23161.1|  248|Tribolium castaneum gustatory recept...    21   6.6  
AJ969955-1|CAI94742.1|  160|Tribolium castaneum torso-like prote...    21   8.7  

>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 26.6 bits (56), Expect = 0.18
 Identities = 13/38 (34%), Positives = 18/38 (47%)
 Frame = -3

Query: 526 FLASILKVSYVHYFHPIFLLCLYLFSYQVSHLSLFSLF 413
           F    L  +Y  Y+  I LLC+Y F Y     ++  LF
Sbjct: 92  FTVHFLLCTYYFYYAFIILLCVYYFYYAFIIFTVHLLF 129



 Score = 26.2 bits (55), Expect = 0.23
 Identities = 11/48 (22%), Positives = 24/48 (50%)
 Frame = -3

Query: 184 NYLISCDYFWFSHSIYLYLYFWSFLSTFHWLGILSKLCFQYLQLSTLF 41
           ++L+   YF+++  I L +Y++ +      + +L  LC  Y  +   F
Sbjct: 95  HFLLCTYYFYYAFIILLCVYYFYYAFIIFTVHLLFLLCIYYFVVPLFF 142



 Score = 24.2 bits (50), Expect = 0.94
 Identities = 18/49 (36%), Positives = 21/49 (42%), Gaps = 4/49 (8%)
 Frame = -3

Query: 514 ILKVSYVHYFHPIFLLCLYLFSYQ----VSHLSLFSLFQNF*CYDHLLF 380
           I  +  + Y   I LLC+Y F Y       HL L      F  Y HLLF
Sbjct: 221 IFTIHLLFYCVLIILLCIYYFYYAFILFTVHLLLLVCIYYF-YYMHLLF 268



 Score = 22.2 bits (45), Expect = 3.8
 Identities = 13/37 (35%), Positives = 20/37 (54%), Gaps = 2/37 (5%)
 Frame = -3

Query: 484 HPIFLLCLYLFSYQVSH-LSLFSLFQNF*CYD-HLLF 380
           H +FLLC+Y F   +   L ++  +  F  +  HLLF
Sbjct: 126 HLLFLLCIYYFVVPLFFLLCIYYFYCAFIIFTVHLLF 162



 Score = 21.8 bits (44), Expect = 5.0
 Identities = 7/11 (63%), Positives = 9/11 (81%)
 Frame = -3

Query: 484 HPIFLLCLYLF 452
           H +FLLC+Y F
Sbjct: 278 HLLFLLCIYYF 288



 Score = 21.0 bits (42), Expect = 8.7
 Identities = 7/11 (63%), Positives = 9/11 (81%)
 Frame = -3

Query: 484 HPIFLLCLYLF 452
           H +FLLC+Y F
Sbjct: 159 HLLFLLCIYHF 169


>AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosine
           kinase Torso-likeprotein protein.
          Length = 803

 Score = 24.2 bits (50), Expect = 0.94
 Identities = 9/14 (64%), Positives = 13/14 (92%)
 Frame = +1

Query: 73  KALKESPTSEKLKE 114
           K LKESPTSE++++
Sbjct: 483 KMLKESPTSEEIRQ 496


>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
           candidate 46 protein.
          Length = 1451

 Score = 23.4 bits (48), Expect = 1.6
 Identities = 10/31 (32%), Positives = 19/31 (61%)
 Frame = -3

Query: 505 VSYVHYFHPIFLLCLYLFSYQVSHLSLFSLF 413
           VS++     IF++C+ + S Q++ L L  +F
Sbjct: 606 VSFLLITQTIFIICVIVQSEQIAWLHLLYIF 636


>AM292349-1|CAL23161.1|  248|Tribolium castaneum gustatory receptor
           candidate 28 protein.
          Length = 248

 Score = 21.4 bits (43), Expect = 6.6
 Identities = 4/18 (22%), Positives = 13/18 (72%)
 Frame = -3

Query: 499 YVHYFHPIFLLCLYLFSY 446
           +VH+++P+  +  Y+ ++
Sbjct: 109 FVHFYYPVATMSFYVLNF 126


>AJ969955-1|CAI94742.1|  160|Tribolium castaneum torso-like protein
           protein.
          Length = 160

 Score = 21.0 bits (42), Expect = 8.7
 Identities = 9/20 (45%), Positives = 11/20 (55%)
 Frame = +2

Query: 449 RKKIKTQKKNRMKVMNIRHL 508
           R+ I  Q K R+K   I HL
Sbjct: 111 RRSIYLQIKERLKTQGISHL 130


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.314    0.132    0.360 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 80,203
Number of Sequences: 336
Number of extensions: 1301
Number of successful extensions: 10
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 16656800
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.9 bits)