Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-1022
         (648 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY118705-1|AAM50565.1|  853|Drosophila melanogaster AT21921p pro...    29   7.2  
AE014296-1100|AAF50673.2|  853|Drosophila melanogaster CG8219-PA...    29   7.2  
AY119173-1|AAM51033.1|  329|Drosophila melanogaster RH49985p pro...    28   9.5  
AE014297-679|AAF54172.2|  329|Drosophila melanogaster CG2781-PA ...    28   9.5  

>AY118705-1|AAM50565.1|  853|Drosophila melanogaster AT21921p
           protein.
          Length = 853

 Score = 28.7 bits (61), Expect = 7.2
 Identities = 17/38 (44%), Positives = 23/38 (60%)
 Frame = +1

Query: 4   LPVLKISLKDGVQTVLKVEDTENKALKESPTSEKLKEN 117
           LP+LK S   G  T L V++TEN+A + S +   LK N
Sbjct: 14  LPILKDSQSPGKATQLAVQETENEATR-SMSGLILKNN 50


>AE014296-1100|AAF50673.2|  853|Drosophila melanogaster CG8219-PA
           protein.
          Length = 853

 Score = 28.7 bits (61), Expect = 7.2
 Identities = 17/38 (44%), Positives = 23/38 (60%)
 Frame = +1

Query: 4   LPVLKISLKDGVQTVLKVEDTENKALKESPTSEKLKEN 117
           LP+LK S   G  T L V++TEN+A + S +   LK N
Sbjct: 14  LPILKDSQSPGKATQLAVQETENEATR-SMSGLILKNN 50


>AY119173-1|AAM51033.1|  329|Drosophila melanogaster RH49985p
           protein.
          Length = 329

 Score = 28.3 bits (60), Expect = 9.5
 Identities = 12/35 (34%), Positives = 18/35 (51%)
 Frame = -3

Query: 217 HSKNVLYSNVSNYLISCDYFWFSHSIYLYLYFWSF 113
           HS  + + N  NY I   YF  +H++  Y  F +F
Sbjct: 219 HSFQLFFKNDCNYPIGFAYFIGAHAVMFYFLFSNF 253


>AE014297-679|AAF54172.2|  329|Drosophila melanogaster CG2781-PA
           protein.
          Length = 329

 Score = 28.3 bits (60), Expect = 9.5
 Identities = 12/35 (34%), Positives = 18/35 (51%)
 Frame = -3

Query: 217 HSKNVLYSNVSNYLISCDYFWFSHSIYLYLYFWSF 113
           HS  + + N  NY I   YF  +H++  Y  F +F
Sbjct: 219 HSFQLFFKNDCNYPIGFAYFIGAHAVMFYFLFSNF 253


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.314    0.132    0.360 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,188,184
Number of Sequences: 53049
Number of extensions: 193544
Number of successful extensions: 568
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 479
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 548
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2744900550
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.9 bits)