Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-1019
         (780 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY273778-1|AAP33487.1|  427|Apis mellifera ultraspiracle protein...    25   1.0  
AF263459-1|AAF73057.1|  427|Apis mellifera ultraspiracle protein...    25   1.0  
AJ547798-1|CAD67999.1|  587|Apis mellifera octopamine receptor p...    23   4.2  
DQ244074-1|ABB36784.1|  517|Apis mellifera cytochrome P450 monoo...    22   5.6  
AB022907-1|BAA86908.1|  615|Apis mellifera glucose oxidase protein.    22   5.6  

>AY273778-1|AAP33487.1|  427|Apis mellifera ultraspiracle protein
           protein.
          Length = 427

 Score = 24.6 bits (51), Expect = 1.0
 Identities = 15/57 (26%), Positives = 27/57 (47%), Gaps = 2/57 (3%)
 Frame = +2

Query: 497 DQRKC**NEKYRARCTYCRDWRSVQEG--RACRKDDSRNLGRFYDSGAEDISSSGSD 661
           +++ C  +++ R RC YCR  + +  G  R   +++ +       S  E  SS  SD
Sbjct: 148 EEKSCIIDKRQRNRCQYCRYQKCLAMGMKREAVQEERQRTKERDQSEVESTSSLHSD 204


>AF263459-1|AAF73057.1|  427|Apis mellifera ultraspiracle protein
           protein.
          Length = 427

 Score = 24.6 bits (51), Expect = 1.0
 Identities = 15/57 (26%), Positives = 27/57 (47%), Gaps = 2/57 (3%)
 Frame = +2

Query: 497 DQRKC**NEKYRARCTYCRDWRSVQEG--RACRKDDSRNLGRFYDSGAEDISSSGSD 661
           +++ C  +++ R RC YCR  + +  G  R   +++ +       S  E  SS  SD
Sbjct: 148 EEKSCIIDKRQRNRCQYCRYQKCLAMGMKREAVQEERQRTKERDQSEVESTSSLHSD 204


>AJ547798-1|CAD67999.1|  587|Apis mellifera octopamine receptor
           protein.
          Length = 587

 Score = 22.6 bits (46), Expect = 4.2
 Identities = 10/31 (32%), Positives = 14/31 (45%)
 Frame = -3

Query: 445 AALEFTGRL*VWKNWLANTSWSSSLASCDPW 353
           A L F+    V+K W+    W S   + D W
Sbjct: 117 AVLPFSATWEVFKVWIFGDLWCSIWLAVDVW 147


>DQ244074-1|ABB36784.1|  517|Apis mellifera cytochrome P450
           monooxygenase protein.
          Length = 517

 Score = 22.2 bits (45), Expect = 5.6
 Identities = 7/8 (87%), Positives = 8/8 (100%)
 Frame = +3

Query: 210 PLWKLIPT 233
           PLWKL+PT
Sbjct: 258 PLWKLLPT 265


>AB022907-1|BAA86908.1|  615|Apis mellifera glucose oxidase protein.
          Length = 615

 Score = 22.2 bits (45), Expect = 5.6
 Identities = 7/21 (33%), Positives = 13/21 (61%)
 Frame = -3

Query: 238 TKVGISFHKGANRLNGERFSH 176
           ++VG  +H+    +N ERF +
Sbjct: 199 SRVGTKYHRSGGLMNVERFPY 219


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 171,908
Number of Sequences: 438
Number of extensions: 3260
Number of successful extensions: 7
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 24518154
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)