Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-1018
         (721 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF633444-1|ABR32189.1|  721|Tribolium castaneum heat shock prote...    24   1.4  
AM292334-1|CAL23146.2|  390|Tribolium castaneum gustatory recept...    23   3.3  
AM292333-1|CAL23145.2|  316|Tribolium castaneum gustatory recept...    23   3.3  

>EF633444-1|ABR32189.1|  721|Tribolium castaneum heat shock protein
           90 protein.
          Length = 721

 Score = 23.8 bits (49), Expect = 1.4
 Identities = 10/34 (29%), Positives = 21/34 (61%)
 Frame = -3

Query: 635 DTKTSQMQIVLVKEILLQVHTYYNAKILFLQPII 534
           D +T   Q  + + + L ++T+Y+ K +FL+ +I
Sbjct: 9   DVETFAFQAEIAQLMSLIINTFYSNKEIFLRELI 42


>AM292334-1|CAL23146.2|  390|Tribolium castaneum gustatory receptor
           candidate 13 protein.
          Length = 390

 Score = 22.6 bits (46), Expect = 3.3
 Identities = 8/15 (53%), Positives = 14/15 (93%)
 Frame = -1

Query: 478 LKRMKFILQMLQLIG 434
           LK++KF+L++ QL+G
Sbjct: 78  LKKLKFLLKLGQLLG 92


>AM292333-1|CAL23145.2|  316|Tribolium castaneum gustatory receptor
           candidate 12 protein.
          Length = 316

 Score = 22.6 bits (46), Expect = 3.3
 Identities = 8/15 (53%), Positives = 14/15 (93%)
 Frame = -1

Query: 478 LKRMKFILQMLQLIG 434
           LK++KF+L++ QL+G
Sbjct: 4   LKKLKFLLKLGQLLG 18


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 149,539
Number of Sequences: 336
Number of extensions: 3044
Number of successful extensions: 3
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 19155320
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)