Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-1018
         (721 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC029884-1|AAH29884.1|  200|Homo sapiens membrane-spanning 4-dom...    30   7.3  
AF237907-1|AAK37416.1|  200|Homo sapiens MS4A5 protein protein.        30   7.3  
AB013103-1|BAB18739.1|  200|Homo sapiens MS4A5 protein.                30   7.3  

>BC029884-1|AAH29884.1|  200|Homo sapiens membrane-spanning
           4-domains, subfamily A, member 5 protein.
          Length = 200

 Score = 30.3 bits (65), Expect = 7.3
 Identities = 16/29 (55%), Positives = 19/29 (65%)
 Frame = -3

Query: 146 VLVIFLGDLVTLFCFSNVT*FISLLLKIL 60
           V V+FLG L+TL  FS +  FISL   IL
Sbjct: 159 VTVLFLGILITLMTFSIIELFISLPFSIL 187


>AF237907-1|AAK37416.1|  200|Homo sapiens MS4A5 protein protein.
          Length = 200

 Score = 30.3 bits (65), Expect = 7.3
 Identities = 16/29 (55%), Positives = 19/29 (65%)
 Frame = -3

Query: 146 VLVIFLGDLVTLFCFSNVT*FISLLLKIL 60
           V V+FLG L+TL  FS +  FISL   IL
Sbjct: 159 VTVLFLGILITLMTFSIIELFISLPFSIL 187


>AB013103-1|BAB18739.1|  200|Homo sapiens MS4A5 protein.
          Length = 200

 Score = 30.3 bits (65), Expect = 7.3
 Identities = 16/29 (55%), Positives = 19/29 (65%)
 Frame = -3

Query: 146 VLVIFLGDLVTLFCFSNVT*FISLLLKIL 60
           V V+FLG L+TL  FS +  FISL   IL
Sbjct: 159 VTVLFLGILITLMTFSIIELFISLPFSIL 187


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 86,453,231
Number of Sequences: 237096
Number of extensions: 1592380
Number of successful extensions: 2341
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 2289
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2341
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8455186714
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)