Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-1016
(706 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At1g09210.1 68414.m01028 calreticulin 2 (CRT2) identical to SP|Q... 235 2e-62
At1g56340.1 68414.m06476 calreticulin 1 (CRT1) identical to calr... 231 3e-61
At1g08450.1 68414.m00934 calreticulin 3 (CRT3) identical to simi... 213 7e-56
At1g08450.2 68414.m00935 calreticulin 3 (CRT3) identical to simi... 109 2e-24
At5g61790.1 68418.m07754 calnexin 1 (CNX1) identical to calnexin... 99 1e-21
At5g07340.1 68418.m00838 calnexin, putative identical to calnexi... 93 1e-19
At5g56820.1 68418.m07090 F-box family protein contains F-box dom... 33 0.14
At3g31540.1 68416.m04025 hypothetical protein 31 0.74
At1g74170.1 68414.m08590 leucine-rich repeat family protein cont... 31 0.74
At1g74190.1 68414.m08592 leucine-rich repeat family protein cont... 30 1.3
At2g15695.1 68415.m01797 expressed protein contains Pfam PF05705... 30 1.7
At1g60890.1 68414.m06855 phosphatidylinositol-4-phosphate 5-kina... 29 3.0
At3g56640.1 68416.m06298 exocyst complex subunit Sec15-like fami... 29 4.0
At3g02885.1 68416.m00283 gibberellin-regulated protein 5 (GASA5)... 29 4.0
At4g01050.1 68417.m00142 hydroxyproline-rich glycoprotein family... 27 9.2
At2g37070.1 68415.m04549 expressed protein 27 9.2
At2g28340.1 68415.m03444 zinc finger (GATA type) family protein ... 27 9.2
>At1g09210.1 68414.m01028 calreticulin 2 (CRT2) identical to
SP|Q38858 Calreticulin 2 precursor {Arabidopsis
thaliana}
Length = 424
Score = 235 bits (576), Expect = 2e-62
Identities = 109/193 (56%), Positives = 139/193 (72%), Gaps = 2/193 (1%)
Frame = +1
Query: 94 VFFEEKFPDDSWESNWVYSEHPGKE--FGKFKLTAGKFFSDPEDDKGLKTSEDARFYALS 267
V FEE+F DD WE+ WV SE + G++K TAG + D +DKG++TSED RFYA+S
Sbjct: 24 VIFEERF-DDGWENRWVKSEWKKDDNTAGEWKHTAGNWSGDA-NDKGIQTSEDYRFYAIS 81
Query: 268 RKFKPFSNEGKPLVVQFTVKHEQDIDCGGGYLKVFDCKLEQKDMHGETPYEIMFGPDICG 447
+F FSN+ K LV QF+VKHEQ +DCGGGY+K+ ++QK G+TPY IMFGPDICG
Sbjct: 82 AEFPEFSNKDKTLVFQFSVKHEQKLDCGGGYMKLLSGDVDQKKFGGDTPYSIMFGPDICG 141
Query: 448 PGTKKVHVIFSYKGKNHLIKKDIRCKDDVYTHLYTLIVKPDNTYEVLIDNEKVESGDLEA 627
TKKVH I +Y NHLIKKD+ C+ D TH+YT I++PD TY +LIDN + ++G L +
Sbjct: 142 YSTKKVHAILTYNEANHLIKKDVPCETDQLTHVYTFILRPDATYSILIDNVEKQTGSLYS 201
Query: 628 DWDFLSPKKIKDP 666
DWD L PKKIKDP
Sbjct: 202 DWDLLPPKKIKDP 214
Score = 30.3 bits (65), Expect = 1.3
Identities = 10/17 (58%), Positives = 14/17 (82%)
Frame = +2
Query: 650 RKSRTPEAKKPEDWDDK 700
+K + P AKKPEDWD++
Sbjct: 209 KKIKDPSAKKPEDWDEQ 225
>At1g56340.1 68414.m06476 calreticulin 1 (CRT1) identical to
calreticulin (crt1) GI:2052379 [Arabidopsis thaliana]
Length = 425
Score = 231 bits (566), Expect = 3e-61
Identities = 105/197 (53%), Positives = 140/197 (71%), Gaps = 2/197 (1%)
Frame = +1
Query: 82 INCDVFFEEKFPDDSWESNWVYSEHPGKE--FGKFKLTAGKFFSDPEDDKGLKTSEDARF 255
++ +V FEEKF +D WE WV S+ + G++K TAG + D +DKG++TSED RF
Sbjct: 20 VSAEVIFEEKF-EDGWEKRWVKSDWKKDDNTAGEWKHTAGNWSGDA-NDKGIQTSEDYRF 77
Query: 256 YALSRKFKPFSNEGKPLVVQFTVKHEQDIDCGGGYLKVFDCKLEQKDMHGETPYEIMFGP 435
YA+S +F FSN+ K LV QF+VKHEQ +DCGGGY+K+ ++Q G+TPY IMFGP
Sbjct: 78 YAISAEFPEFSNKDKTLVFQFSVKHEQKLDCGGGYMKLLSDDVDQTKFGGDTPYSIMFGP 137
Query: 436 DICGPGTKKVHVIFSYKGKNHLIKKDIRCKDDVYTHLYTLIVKPDNTYEVLIDNEKVESG 615
DICG TKKVH I +Y G NHLIKK++ C+ D TH+YT +++PD TY +LIDN + ++G
Sbjct: 138 DICGYSTKKVHAILTYNGTNHLIKKEVPCETDQLTHVYTFVLRPDATYSILIDNVEKQTG 197
Query: 616 DLEADWDFLSPKKIKDP 666
L +DWD L KKIKDP
Sbjct: 198 SLYSDWDLLPAKKIKDP 214
Score = 33.5 bits (73), Expect = 0.14
Identities = 12/17 (70%), Positives = 14/17 (82%)
Frame = +2
Query: 650 RKSRTPEAKKPEDWDDK 700
+K + P AKKPEDWDDK
Sbjct: 209 KKIKDPSAKKPEDWDDK 225
Score = 27.5 bits (58), Expect = 9.2
Identities = 9/11 (81%), Positives = 11/11 (100%)
Frame = +2
Query: 668 EAKKPEDWDDK 700
+AKKPEDWDD+
Sbjct: 250 DAKKPEDWDDE 260
>At1g08450.1 68414.m00934 calreticulin 3 (CRT3) identical to similar
to SP|O04153 Calreticulin 3 precursor {Arabidopsis
thaliana}
Length = 424
Score = 213 bits (521), Expect = 7e-56
Identities = 98/192 (51%), Positives = 134/192 (69%), Gaps = 2/192 (1%)
Frame = +1
Query: 91 DVFFEEKFPDDSWESNWVYSEHPGKE--FGKFKLTAGKFFSDPEDDKGLKTSEDARFYAL 264
++F EE F + W+S WV S+ E G FK TAGK+ DP D+KG++T DA+ YA+
Sbjct: 29 EIFLEEHF-EGGWKSRWVLSDWKRNEGKAGTFKHTAGKWPGDP-DNKGIQTYNDAKHYAI 86
Query: 265 SRKFKPFSNEGKPLVVQFTVKHEQDIDCGGGYLKVFDCKLEQKDMHGETPYEIMFGPDIC 444
S K FSN+ + LVVQ++VK EQDI+CGG Y+K+ + QK G+TPY +MFGPDIC
Sbjct: 87 SAKIPEFSNKNRTLVVQYSVKIEQDIECGGAYIKLLSGYVNQKQFGGDTPYSLMFGPDIC 146
Query: 445 GPGTKKVHVIFSYKGKNHLIKKDIRCKDDVYTHLYTLIVKPDNTYEVLIDNEKVESGDLE 624
G TKK+HVI SY+G+N+ IKKD++C+ D H YT I++PD +Y VL+DN++ E G +
Sbjct: 147 GTQTKKLHVIVSYQGQNYPIKKDLQCETDKLNHFYTFILRPDASYSVLVDNKEREFGSMY 206
Query: 625 ADWDFLSPKKIK 660
DWD L P+KIK
Sbjct: 207 TDWDILPPRKIK 218
Score = 30.7 bits (66), Expect = 0.98
Identities = 11/17 (64%), Positives = 13/17 (76%)
Frame = +2
Query: 650 RKSRTPEAKKPEDWDDK 700
RK + AKKPEDWDD+
Sbjct: 215 RKIKVKNAKKPEDWDDR 231
>At1g08450.2 68414.m00935 calreticulin 3 (CRT3) identical to similar
to SP|O04153 Calreticulin 3 precursor {Arabidopsis
thaliana}
Length = 370
Score = 109 bits (262), Expect = 2e-24
Identities = 53/114 (46%), Positives = 75/114 (65%), Gaps = 2/114 (1%)
Frame = +1
Query: 91 DVFFEEKFPDDSWESNWVYSEHPGKE--FGKFKLTAGKFFSDPEDDKGLKTSEDARFYAL 264
++F EE F + W+S WV S+ E G FK TAGK+ DP D+KG++T DA+ YA+
Sbjct: 29 EIFLEEHF-EGGWKSRWVLSDWKRNEGKAGTFKHTAGKWPGDP-DNKGIQTYNDAKHYAI 86
Query: 265 SRKFKPFSNEGKPLVVQFTVKHEQDIDCGGGYLKVFDCKLEQKDMHGETPYEIM 426
S K FSN+ + LVVQ++VK EQDI+CGG Y+K+ + QK G+TPY ++
Sbjct: 87 SAKIPEFSNKNRTLVVQYSVKIEQDIECGGAYIKLLSGYVNQKQFGGDTPYSVL 140
Score = 41.1 bits (92), Expect = 7e-04
Identities = 16/31 (51%), Positives = 21/31 (67%)
Frame = +1
Query: 568 DNTYEVLIDNEKVESGDLEADWDFLSPKKIK 660
D Y VL+DN++ E G + DWD L P+KIK
Sbjct: 134 DTPYSVLVDNKEREFGSMYTDWDILPPRKIK 164
Score = 30.7 bits (66), Expect = 0.98
Identities = 11/17 (64%), Positives = 13/17 (76%)
Frame = +2
Query: 650 RKSRTPEAKKPEDWDDK 700
RK + AKKPEDWDD+
Sbjct: 161 RKIKVKNAKKPEDWDDR 177
>At5g61790.1 68418.m07754 calnexin 1 (CNX1) identical to calnexin
homolog 1, Arabidopsis thaliana, EMBL:AT08315
[SP|P29402]
Length = 530
Score = 99 bits (238), Expect = 1e-21
Identities = 64/197 (32%), Positives = 102/197 (51%), Gaps = 14/197 (7%)
Frame = +1
Query: 118 DDSWESNWVYSEHPGKEFGKFKLTAGKFFSDPEDDKGLKTSEDARFYALSRKF-KPFSNE 294
D+ ++ W+ S++ E G +K S+ +D GL SE AR Y + ++ +P + +
Sbjct: 36 DEPFDGRWIVSKNSDYE-GVWKHAK----SEGHEDYGLLVSEKARKYGIVKELDEPLNLK 90
Query: 295 GKPLVVQFTVKHEQDIDCGGGYLKVF---DCKLEQKDMHGETPYEIMFGPDICGPGTKKV 465
+V+Q+ V+ ++ ++CGG YLK + + E+PY IMFGPD CG GT KV
Sbjct: 91 EGTVVLQYEVRFQEGLECGGAYLKYLRPQEAGWTPQGFDSESPYSIMFGPDKCG-GTNKV 149
Query: 466 HVIFSYKGKN------HLIKKDIRCKDDVYTHLYTLIVKPDNTYEVLIDNEKVESGDLEA 627
H I +K H +K D +H+YT I+KPDN +L+D E+ + +L +
Sbjct: 150 HFILKHKNPKSGEYVEHHLKFPPSVPYDKLSHVYTAILKPDNEVRILVDGEEKKKANLLS 209
Query: 628 DWDF----LSPKKIKDP 666
DF + K I DP
Sbjct: 210 GEDFEPALIPAKTIPDP 226
Score = 29.1 bits (62), Expect = 3.0
Identities = 10/12 (83%), Positives = 11/12 (91%)
Frame = +2
Query: 665 PEAKKPEDWDDK 700
PEA KPEDWDD+
Sbjct: 281 PEATKPEDWDDE 292
Score = 27.9 bits (59), Expect = 6.9
Identities = 9/12 (75%), Positives = 11/12 (91%)
Frame = +2
Query: 665 PEAKKPEDWDDK 700
PE KKPEDWD++
Sbjct: 226 PEDKKPEDWDER 237
>At5g07340.1 68418.m00838 calnexin, putative identical to calnexin
homolog 2 from Arabidopsis thaliana [SP|Q38798], strong
similarity to calnexin homolog 1, Arabidopsis thaliana,
EMBL:AT08315 [SP|P29402]; contains Pfam profile PF00262
calreticulin family
Length = 532
Score = 93.5 bits (222), Expect = 1e-19
Identities = 65/200 (32%), Positives = 102/200 (51%), Gaps = 17/200 (8%)
Frame = +1
Query: 118 DDSWESNWVYSEHPGKEFGKFKLTAGKFFSDPEDDKGLKTSEDARFYALSRKF---KPFS 288
D+ ++ WV SE + G +K S+ DD GL SE A+ Y + ++ +P +
Sbjct: 36 DEPFDGRWVVSEKAEYQ-GVWKHEK----SEGHDDYGLLVSEKAKKYGIVKELDVDEPLN 90
Query: 289 -NEGKPLVVQFTVKHEQDIDCGGGYLKVF---DCKLEQKDMHGETPYEIMFGPDICGPGT 456
NEG +V+Q+ + ++ ++CGG YLK + + ++PY IMFGPD CG T
Sbjct: 91 LNEGT-VVLQYEARFQEGLECGGAYLKYLRPQEAGWVPQGFDNDSPYSIMFGPDKCG-AT 148
Query: 457 KKVHVIFSYKGKN------HLIKKDIRCKDDVYTHLYTLIVKPDNTYEVLIDNEKVESGD 618
KVH I +K H +K D+ +H+YT ++K DN +L+D E+ + G+
Sbjct: 149 NKVHFILKHKNPKSGEFVEHHLKFPPSVPFDMLSHVYTAVLKSDNEVRILVDGEEKKKGN 208
Query: 619 LEADWDFLSP----KKIKDP 666
L + DF P K I DP
Sbjct: 209 LLSAEDFEPPLIPSKTIPDP 228
Score = 29.5 bits (63), Expect = 2.3
Identities = 10/12 (83%), Positives = 11/12 (91%)
Frame = +2
Query: 665 PEAKKPEDWDDK 700
PEA KPEDWDD+
Sbjct: 283 PEASKPEDWDDE 294
Score = 27.9 bits (59), Expect = 6.9
Identities = 9/12 (75%), Positives = 11/12 (91%)
Frame = +2
Query: 665 PEAKKPEDWDDK 700
PE KKPEDWD++
Sbjct: 228 PEDKKPEDWDER 239
>At5g56820.1 68418.m07090 F-box family protein contains F-box domain
Pfam:PF00646
Length = 435
Score = 33.5 bits (73), Expect = 0.14
Identities = 28/101 (27%), Positives = 52/101 (51%), Gaps = 6/101 (5%)
Frame = -3
Query: 287 LNG---LNLRERA*NLASSEVF-KPLSSSGSLKNFPAVNLNFPNSFPGC-SLYTQLLSHE 123
LNG L+L + + NL + ++ KPL S +K+ P +++ PNS P C + + + L +
Sbjct: 305 LNGDRILSLLKHSPNLQTLKLNEKPLRS---IKDQPNISVRKPNSVPECLTFHLETLEWQ 361
Query: 122 S-SGNFSSKNTSQFIEDNASKLTTTSTTAFIFDSQYHFFNK 3
+G K + +I NA +L T + + + S++ K
Sbjct: 362 GYAGRPEDKEIAVYILGNALRLNTATISRYFSSSRFRHHQK 402
>At3g31540.1 68416.m04025 hypothetical protein
Length = 699
Score = 31.1 bits (67), Expect = 0.74
Identities = 17/53 (32%), Positives = 23/53 (43%)
Frame = +1
Query: 490 KNHLIKKDIRCKDDVYTHLYTLIVKPDNTYEVLIDNEKVESGDLEADWDFLSP 648
KN I + CKDD YT + + D E L+ + G L+ FL P
Sbjct: 252 KNMKIIEGFPCKDDAYTDYFFFVALEDAVLEDLVGKVLTKWGILDRPIRFLEP 304
>At1g74170.1 68414.m08590 leucine-rich repeat family protein
contains leucine rich-repeat (LRR) domains Pfam:PF00560,
INTERPRO:IPR001611; similar to Cf-2.2 [Lycopersicon
pimpinellifolium] gi|1184077|gb|AAC15780
Length = 1068
Score = 31.1 bits (67), Expect = 0.74
Identities = 12/38 (31%), Positives = 19/38 (50%)
Frame = +1
Query: 310 VQFTVKHEQDIDCGGGYLKVFDCKLEQKDMHGETPYEI 423
++F KH D GG +F L + ++ GE P E+
Sbjct: 830 IEFATKHRYDAYMGGNLKLLFGMDLSENELSGEIPVEL 867
>At1g74190.1 68414.m08592 leucine-rich repeat family protein
contains leucine rich-repeat (LRR) domains Pfam:PF00560,
INTERPRO:IPR001611; contains similarity to Cf-2.1
[Lycopersicon pimpinellifolium] gi|1184075|gb|AAC15779
Length = 965
Score = 30.3 bits (65), Expect = 1.3
Identities = 12/37 (32%), Positives = 18/37 (48%)
Frame = +1
Query: 310 VQFTVKHEQDIDCGGGYLKVFDCKLEQKDMHGETPYE 420
++F KH D GG +F L + ++ GE P E
Sbjct: 762 IEFATKHRYDAYMGGNLKLLFGMDLSENELSGEIPVE 798
>At2g15695.1 68415.m01797 expressed protein contains Pfam PF05705:
Eukaryotic protein of unknown function (DUF829)
Length = 420
Score = 29.9 bits (64), Expect = 1.7
Identities = 16/43 (37%), Positives = 22/43 (51%)
Frame = -3
Query: 398 MSFCSSLQSKTLRYPPPQSMSCSCLTVNWTTKGLPSLLNGLNL 270
+ F S L K +P + MS V+W KG+ S L+GL L
Sbjct: 147 LDFTSDLNVKFALHPTIRRMSGPSRLVSWVAKGISSGLDGLYL 189
>At1g60890.1 68414.m06855 phosphatidylinositol-4-phosphate 5-kinase
family protein similar to
phosphatidylinositol-4-phosphate 5-kinase AtPIP5K1
[Arabidopsis thaliana] GI:3702691; contains Pfam
profiles PF01504: Phosphatidylinositol-4-phosphate
5-Kinase, PF02493: MORN repeat
Length = 769
Score = 29.1 bits (62), Expect = 3.0
Identities = 14/30 (46%), Positives = 19/30 (63%)
Frame = -3
Query: 137 LLSHESSGNFSSKNTSQFIEDNASKLTTTS 48
LLSH S+ N TS+ + + S+LTTTS
Sbjct: 218 LLSHNSTINIDDLRTSKAVSRSLSELTTTS 247
>At3g56640.1 68416.m06298 exocyst complex subunit Sec15-like family
protein contains Pfam profile PF04091: Exocyst complex
subunit Sec15-like
Length = 789
Score = 28.7 bits (61), Expect = 4.0
Identities = 18/47 (38%), Positives = 25/47 (53%)
Frame = +1
Query: 490 KNHLIKKDIRCKDDVYTHLYTLIVKPDNTYEVLIDNEKVESGDLEAD 630
KN KK+ +D TH IV D VL+D E+++S DL +D
Sbjct: 53 KNVARKKEAEIEDLCKTHYEEFIVAVDELRGVLVDAEELKS-DLASD 98
>At3g02885.1 68416.m00283 gibberellin-regulated protein 5 (GASA5) /
gibberellin-responsive protein 5 identical to GASA5
[Arabidopsis thaliana] GI:1289320
Length = 97
Score = 28.7 bits (61), Expect = 4.0
Identities = 15/37 (40%), Positives = 16/37 (43%), Gaps = 3/37 (8%)
Frame = -3
Query: 404 PCMSFCSSLQSKTLRYPP---PQSMSCSCLTVNWTTK 303
PCM FC K L PP +C C NW TK
Sbjct: 55 PCMFFCLKCCKKCLCVPPGTFGNKQTCPCYN-NWKTK 90
>At4g01050.1 68417.m00142 hydroxyproline-rich glycoprotein family
protein
Length = 466
Score = 27.5 bits (58), Expect = 9.2
Identities = 16/55 (29%), Positives = 27/55 (49%), Gaps = 1/55 (1%)
Frame = +1
Query: 394 DMHGETPYEIMFGPDICGPGTKKVHVIFSYKGKNHLIKK-DIRCKDDVYTHLYTL 555
D+ + + P+I G G K V +++ + K +KK ++ KD T LY L
Sbjct: 152 DIRATADFRQVGSPNIKGLGKKAVSTVYNGEDKPGFLKKLSLKFKDPENTTLYIL 206
>At2g37070.1 68415.m04549 expressed protein
Length = 420
Score = 27.5 bits (58), Expect = 9.2
Identities = 33/120 (27%), Positives = 57/120 (47%), Gaps = 5/120 (4%)
Frame = -3
Query: 407 SPCMSFCSSLQSKTLRYPPPQSMSCS----CLTVNWTTKGLPSLLNGLNLRERA*NLAS- 243
+P + F S+L+S S SCS CL+V+ T PS+ + ++++ +AS
Sbjct: 164 TPVVPFKSALRSSVASKNELTS-SCSSIESCLSVSSTASNKPSIHSVKQKKDQSLRIASH 222
Query: 242 SEVFKPLSSSGSLKNFPAVNLNFPNSFPGCSLYTQLLSHESSGNFSSKNTSQFIEDNASK 63
S +P SS+GS +N L P G + + SS ++SS++ F + +K
Sbjct: 223 SLANRPKSSAGS-RNID--QLKVPPVSAGRTYKFNVSRLSSSVDWSSESPRAFTPNKMAK 279
>At2g28340.1 68415.m03444 zinc finger (GATA type) family protein
and genefinder
Length = 315
Score = 27.5 bits (58), Expect = 9.2
Identities = 15/40 (37%), Positives = 20/40 (50%), Gaps = 6/40 (15%)
Frame = +1
Query: 565 PDNTYEVLIDN------EKVESGDLEADWDFLSPKKIKDP 666
PDN + L+D E +E+GD E DWD K + P
Sbjct: 16 PDNFLDNLVDPTNDVSVEDIETGDDEGDWDAKFQKLVPPP 55
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,494,445
Number of Sequences: 28952
Number of extensions: 375397
Number of successful extensions: 1051
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 999
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1040
length of database: 12,070,560
effective HSP length: 79
effective length of database: 9,783,352
effective search space used: 1516419560
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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