Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-1012
         (801 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_UPI0000E82361 Cluster: PREDICTED: similar to trans-sial...    38   0.39 
UniRef50_Q57VZ8 Cluster: Putative uncharacterized protein; n=1; ...    34   3.6  
UniRef50_A3A6W5 Cluster: Putative uncharacterized protein; n=1; ...    33   6.3  
UniRef50_Q10NF9 Cluster: Retrotransposon protein, putative, uncl...    33   8.4  
UniRef50_Q75DN4 Cluster: ABL017Cp; n=1; Eremothecium gossypii|Re...    33   8.4  
UniRef50_A2QL48 Cluster: Contig An05c0060, complete genome; n=1;...    33   8.4  

>UniRef50_UPI0000E82361 Cluster: PREDICTED: similar to
           trans-sialidase, putative, partial; n=1; Gallus
           gallus|Rep: PREDICTED: similar to trans-sialidase,
           putative, partial - Gallus gallus
          Length = 213

 Score = 37.5 bits (83), Expect = 0.39
 Identities = 27/47 (57%), Positives = 27/47 (57%), Gaps = 6/47 (12%)
 Frame = +1

Query: 100 NRAER-RAL-----PSVAERSRAWPSVPERGRARPSAAERCSHYTSG 222
           NRAER RAL     PS AE SRA P   E  RA PS AE CS   SG
Sbjct: 63  NRAERSRALLSRTEPSRAEPSRAEPCSAEPSRAEPSRAEPCSAEPSG 109



 Score = 34.3 bits (75), Expect = 3.6
 Identities = 21/46 (45%), Positives = 24/46 (52%)
 Frame = +1

Query: 85  KSLSTNRAERRALPSVAERSRAWPSVPERGRARPSAAERCSHYTSG 222
           ++L +     RA PS AE SRA  S  E  RA PS  E CS   SG
Sbjct: 124 RALQSRTEPSRAGPSRAELSRALLSRTEPSRAEPSRGEPCSAEPSG 169



 Score = 33.1 bits (72), Expect = 8.4
 Identities = 21/37 (56%), Positives = 23/37 (62%), Gaps = 1/37 (2%)
 Frame = +1

Query: 100 NRAERR-ALPSVAERSRAWPSVPERGRARPSAAERCS 207
           +RAE   A P+ AERSRA  S  E  RA PS AE CS
Sbjct: 53  SRAEPSPAQPNRAERSRALLSRTEPSRAEPSRAEPCS 89


>UniRef50_Q57VZ8 Cluster: Putative uncharacterized protein; n=1;
           Trypanosoma brucei|Rep: Putative uncharacterized protein
           - Trypanosoma brucei
          Length = 910

 Score = 34.3 bits (75), Expect = 3.6
 Identities = 17/39 (43%), Positives = 21/39 (53%)
 Frame = +3

Query: 153 AERSRAWPSAAERGRALFSLHKWITRAMYCQIYFETLKL 269
           AER R   +    GR+LF L +WI  A Y Q  +E L L
Sbjct: 211 AERFRKNINTIRHGRSLFKLGRWIVNAFYLQEVYERLAL 249


>UniRef50_A3A6W5 Cluster: Putative uncharacterized protein; n=1;
           Oryza sativa (japonica cultivar-group)|Rep: Putative
           uncharacterized protein - Oryza sativa subsp. japonica
           (Rice)
          Length = 450

 Score = 33.5 bits (73), Expect = 6.3
 Identities = 18/43 (41%), Positives = 25/43 (58%)
 Frame = +3

Query: 63  QKYLSRYKKLEHKSRRAPSAPERGRAFPSVAERSRAWPSAAER 191
           +++  R+ KL ++ RRAP    RG A P     SR WPS+A R
Sbjct: 184 RRWRRRHAKLGNQVRRAPG---RGGAAPRRRAASRGWPSSASR 223


>UniRef50_Q10NF9 Cluster: Retrotransposon protein, putative,
           unclassified, expressed; n=6; root|Rep: Retrotransposon
           protein, putative, unclassified, expressed - Oryza
           sativa subsp. japonica (Rice)
          Length = 840

 Score = 33.1 bits (72), Expect = 8.4
 Identities = 17/36 (47%), Positives = 20/36 (55%)
 Frame = -3

Query: 211 SENNARPRSAALGHARERSATLGNARPRSGALGARR 104
           S    RPRS + G  R RS + G  RPRS + G RR
Sbjct: 338 SPGRRRPRSPSPGRRRPRSPSPGRRRPRSPSPGRRR 373



 Score = 33.1 bits (72), Expect = 8.4
 Identities = 17/36 (47%), Positives = 20/36 (55%)
 Frame = -3

Query: 211 SENNARPRSAALGHARERSATLGNARPRSGALGARR 104
           S    RPRS + G  R RS + G  RPRS + G RR
Sbjct: 348 SPGRRRPRSPSPGRRRPRSPSPGRRRPRSPSPGRRR 383



 Score = 33.1 bits (72), Expect = 8.4
 Identities = 17/36 (47%), Positives = 20/36 (55%)
 Frame = -3

Query: 211 SENNARPRSAALGHARERSATLGNARPRSGALGARR 104
           S    RPRS + G  R RS + G  RPRS + G RR
Sbjct: 358 SPGRRRPRSPSPGRRRPRSPSPGRRRPRSPSPGRRR 393



 Score = 33.1 bits (72), Expect = 8.4
 Identities = 17/36 (47%), Positives = 20/36 (55%)
 Frame = -3

Query: 211 SENNARPRSAALGHARERSATLGNARPRSGALGARR 104
           S    RPRS + G  R RS + G  RPRS + G RR
Sbjct: 368 SPGRRRPRSPSPGRRRPRSPSPGRRRPRSRSPGRRR 403


>UniRef50_Q75DN4 Cluster: ABL017Cp; n=1; Eremothecium gossypii|Rep:
           ABL017Cp - Ashbya gossypii (Yeast) (Eremothecium
           gossypii)
          Length = 327

 Score = 33.1 bits (72), Expect = 8.4
 Identities = 20/57 (35%), Positives = 29/57 (50%)
 Frame = +2

Query: 44  YKHKNESKIFVTV*KA*AQIAPSAERSRAWPSVPERGRAFPSVAERGRARPSVVLTT 214
           ++  ++++ FV   K  A  AP+A  + A P+ P  GRAF  V     A PS V  T
Sbjct: 43  FRTLHDAEQFVRSGKRAAPAAPAAPAAPAAPAAPAAGRAFYGVHSSNPAVPSAVFDT 99


>UniRef50_A2QL48 Cluster: Contig An05c0060, complete genome; n=1;
           Aspergillus niger|Rep: Contig An05c0060, complete genome
           - Aspergillus niger
          Length = 719

 Score = 33.1 bits (72), Expect = 8.4
 Identities = 21/62 (33%), Positives = 30/62 (48%), Gaps = 1/62 (1%)
 Frame = +1

Query: 10  LFH*KFRY-NTYLQT*KRIKNICHGIKSLSTNRAERRALPSVAERSRAWPSVPERGRARP 186
           L + KFR   T   T    KN  HG ++      E + LP+ A++   W S P+ G +RP
Sbjct: 205 LMNGKFRQAGTICYTADEFKNTEHGKQNAHAGLYELQHLPNKAQKPVWWNSTPQTGVSRP 264

Query: 187 SA 192
            A
Sbjct: 265 LA 266


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 765,927,261
Number of Sequences: 1657284
Number of extensions: 15194924
Number of successful extensions: 43545
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 39490
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 43085
length of database: 575,637,011
effective HSP length: 99
effective length of database: 411,565,895
effective search space used: 68731504465
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)