Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-1011
         (707 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosin...    26   0.35 
AM292376-1|CAL23188.2|  402|Tribolium castaneum gustatory recept...    21   7.4  
AM292332-1|CAL23144.2|  344|Tribolium castaneum gustatory recept...    21   7.4  
AF322227-1|AAK01654.1|  782|Tribolium castaneum cell surface pro...    21   9.8  

>AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosine
           kinase Torso-likeprotein protein.
          Length = 803

 Score = 25.8 bits (54), Expect = 0.35
 Identities = 16/54 (29%), Positives = 29/54 (53%), Gaps = 1/54 (1%)
 Frame = +2

Query: 263 WLLVNNVS-KRGSTYSLLHFVF*YLKWSVVFLNG*TLEHCNYSETLELISQGGR 421
           W+ + +++ +R +TYS + + F  L W +V L G      + SE L+ +  G R
Sbjct: 660 WMALESLTHQRYTTYSDV-WSFGVLLWEIVTLGGTPYVGVHSSELLDFLKSGNR 712


>AM292376-1|CAL23188.2|  402|Tribolium castaneum gustatory receptor
           candidate 55 protein.
          Length = 402

 Score = 21.4 bits (43), Expect = 7.4
 Identities = 7/15 (46%), Positives = 12/15 (80%)
 Frame = +3

Query: 219 IPQVTDNVDLKCGLY 263
           IPQ++DN+ + C L+
Sbjct: 223 IPQISDNLYILCRLH 237


>AM292332-1|CAL23144.2|  344|Tribolium castaneum gustatory receptor
           candidate 11 protein.
          Length = 344

 Score = 21.4 bits (43), Expect = 7.4
 Identities = 7/15 (46%), Positives = 12/15 (80%)
 Frame = +3

Query: 219 IPQVTDNVDLKCGLY 263
           IPQ++DN+ + C L+
Sbjct: 223 IPQISDNLYILCRLH 237


>AF322227-1|AAK01654.1|  782|Tribolium castaneum cell surface
           protein chaoptin protein.
          Length = 782

 Score = 21.0 bits (42), Expect = 9.8
 Identities = 9/19 (47%), Positives = 13/19 (68%)
 Frame = +2

Query: 260 LWLLVNNVSKRGSTYSLLH 316
           L L +N +S +G  Y+LLH
Sbjct: 431 LTLEINGLSFQGLEYTLLH 449


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 173,288
Number of Sequences: 336
Number of extensions: 3906
Number of successful extensions: 5
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18738900
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)