Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-1009
(582 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At3g25800.1 68416.m03211 serine/threonine protein phosphatase 2A... 170 5e-43
At1g13320.1 68414.m01546 serine/threonine protein phosphatase 2A... 167 5e-42
At1g25490.1 68414.m03165 serine/threonine protein phosphatase 2A... 167 6e-42
At5g16210.1 68418.m01894 HEAT repeat-containing protein contains... 35 0.034
At1g27910.1 68414.m03420 U-box domain-containing protein contain... 29 2.3
At3g13330.1 68416.m01678 expressed protein 28 4.0
At1g72390.1 68414.m08373 expressed protein 28 4.0
At1g66650.1 68414.m07573 seven in absentia (SINA) protein, putat... 28 5.2
At3g46170.1 68416.m04996 short-chain dehydrogenase/reductase (SD... 27 6.9
At4g28990.1 68417.m04143 RNA-binding protein-related contains we... 27 9.1
At4g10550.1 68417.m01727 subtilase family protein contains simil... 27 9.1
At1g72040.1 68414.m08327 deoxynucleoside kinase family contains ... 27 9.1
At1g64960.1 68414.m07363 expressed protein 27 9.1
>At3g25800.1 68416.m03211 serine/threonine protein phosphatase 2A
(PP2A) 65 KDa regulatory subunit A identical to protein
phosphatase 2A 65 kDa regulatory subunit (pDF1)
GI:683502 from [Arabidopsis thaliana]
Length = 587
Score = 170 bits (414), Expect = 5e-43
Identities = 85/162 (52%), Positives = 114/162 (70%)
Frame = +2
Query: 5 CAVVASLLAPEDMEQHVMPTVRARAGDTSWRVRYMVADKFVELQQAVGPELARTDLAQIF 184
CA + LL P+D QH++P + + D SWRVRYMVA++ EL +AVGPE RT+L +
Sbjct: 226 CAALGKLLEPQDCVQHILPVIVNFSQDKSWRVRYMVANQLYELCEAVGPEPTRTELVPAY 285
Query: 185 QALLKDSEAEVRAAAAGKVKDFCMNLDKAHQEHIIMTMILPQIKDLVCDANQHVKSGLAF 364
LL+D+EAEVR AAAGKV FC L+ I + ILP +K+L D++QHV+S LA
Sbjct: 286 VRLLRDNEAEVRIAAAGKVTKFCRILN----PEIAIQHILPCVKELSSDSSQHVRSALAS 341
Query: 365 VIMGLSPIVGRQNTIEHFLPLFLTQLKDECSEVRLNIISNLE 490
VIMG++P++G+ TIEH LP+FL+ LKDE +VRLNIIS L+
Sbjct: 342 VIMGMAPVLGKDATIEHLLPIFLSLLKDEFPDVRLNIISKLD 383
Score = 54.4 bits (125), Expect = 5e-08
Identities = 35/150 (23%), Positives = 66/150 (44%)
Frame = +2
Query: 41 MEQHVMPTVRARAGDTSWRVRYMVADKFVELQQAVGPELARTDLAQIFQALLKDSEAEVR 220
+ Q ++P + A D WRVR + + L +G L + L+D +R
Sbjct: 394 LSQSLLPAIVELAEDRHWRVRLAIIEYIPLLASQLGVGFFDDKLGALCMQWLQDKVHSIR 453
Query: 221 AAAAGKVKDFCMNLDKAHQEHIIMTMILPQIKDLVCDANQHVKSGLAFVIMGLSPIVGRQ 400
AAA +K L + M I+PQ+ ++V + + + + + L+P++G +
Sbjct: 454 DAAANNLK----RLAEEFGPEWAMQHIVPQVLEMVNNPHYLYRMTILRAVSLLAPVMGSE 509
Query: 401 NTIEHFLPLFLTQLKDECSEVRLNIISNLE 490
T LP+ +T KD ++ N+ L+
Sbjct: 510 ITCSKLLPVVMTASKDRVPNIKFNVAKVLQ 539
Score = 50.8 bits (116), Expect = 6e-07
Identities = 36/158 (22%), Positives = 68/158 (43%)
Frame = +2
Query: 14 VASLLAPEDMEQHVMPTVRARAGDTSWRVRYMVADKFVELQQAVGPELARTDLAQIFQAL 193
V S + D+ H + V+ A + R F + P++ +T+L ++ L
Sbjct: 113 VGSQMRESDLVDHFISLVKRLAAGEWFTARVSACGVF-HIAYPSAPDMLKTELRSLYTQL 171
Query: 194 LKDSEAEVRAAAAGKVKDFCMNLDKAHQEHIIMTMILPQIKDLVCDANQHVKSGLAFVIM 373
+D VR AAA + F ++ AH + +M+M +DL D V+
Sbjct: 172 CQDDMPMVRRAAATNLGKFAATVESAHLKTDVMSM----FEDLTQDDQDSVRLLAVEGCA 227
Query: 374 GLSPIVGRQNTIEHFLPLFLTQLKDECSEVRLNIISNL 487
L ++ Q+ ++H LP+ + +D+ VR + + L
Sbjct: 228 ALGKLLEPQDCVQHILPVIVNFSQDKSWRVRYMVANQL 265
>At1g13320.1 68414.m01546 serine/threonine protein phosphatase 2A
(PP2A) 65 kDa regulatory subunit, putative similar to
protein phosphatase 2A 65 kDa regulatory subunit
GI:683502 from [Arabidopsis thaliana]
Length = 587
Score = 167 bits (406), Expect = 5e-42
Identities = 84/162 (51%), Positives = 112/162 (69%)
Frame = +2
Query: 5 CAVVASLLAPEDMEQHVMPTVRARAGDTSWRVRYMVADKFVELQQAVGPELARTDLAQIF 184
CA + LL P+D H++P + + D SWRVRYMVA++ EL +AVGPE RTDL +
Sbjct: 226 CAALGKLLEPQDCVAHILPVIVNFSQDKSWRVRYMVANQLYELCEAVGPEPTRTDLVPAY 285
Query: 185 QALLKDSEAEVRAAAAGKVKDFCMNLDKAHQEHIIMTMILPQIKDLVCDANQHVKSGLAF 364
LL D+EAEVR AAAGKV FC L+ + + ILP +K+L D++QHV+S LA
Sbjct: 286 ARLLCDNEAEVRIAAAGKVTKFCRILN----PELAIQHILPCVKELSSDSSQHVRSALAS 341
Query: 365 VIMGLSPIVGRQNTIEHFLPLFLTQLKDECSEVRLNIISNLE 490
VIMG++P++G+ TIEH LP+FL+ LKDE +VRLNIIS L+
Sbjct: 342 VIMGMAPVLGKDATIEHLLPIFLSLLKDEFPDVRLNIISKLD 383
Score = 53.2 bits (122), Expect = 1e-07
Identities = 33/150 (22%), Positives = 65/150 (43%)
Frame = +2
Query: 41 MEQHVMPTVRARAGDTSWRVRYMVADKFVELQQAVGPELARTDLAQIFQALLKDSEAEVR 220
+ Q ++P + A D WRVR + + L +G L + L+D +R
Sbjct: 394 LSQSLLPAIVELAEDRHWRVRLAIIEYIPLLASQLGVGFFDEKLGALCMQWLQDKVHSIR 453
Query: 221 AAAAGKVKDFCMNLDKAHQEHIIMTMILPQIKDLVCDANQHVKSGLAFVIMGLSPIVGRQ 400
AAA +K L + M I+PQ+ +++ + + + + + L+P++G +
Sbjct: 454 EAAANNLK----RLAEEFGPEWAMQHIVPQVLEMINNPHYLYRMTILRAVSLLAPVMGSE 509
Query: 401 NTIEHFLPLFLTQLKDECSEVRLNIISNLE 490
T LP +T KD ++ N+ ++
Sbjct: 510 ITCSKLLPAVITASKDRVPNIKFNVAKMMQ 539
Score = 50.4 bits (115), Expect = 9e-07
Identities = 36/158 (22%), Positives = 67/158 (42%)
Frame = +2
Query: 14 VASLLAPEDMEQHVMPTVRARAGDTSWRVRYMVADKFVELQQAVGPELARTDLAQIFQAL 193
+ + + D+ +H P + R W + A + P++ +T+L I+ L
Sbjct: 113 IGAQMRESDLVEHFTPLAK-RLSAGEWFTARVSACGIFHIAYPSAPDVLKTELRSIYGQL 171
Query: 194 LKDSEAEVRAAAAGKVKDFCMNLDKAHQEHIIMTMILPQIKDLVCDANQHVKSGLAFVIM 373
+D VR AAA + F ++ AH + IM+M +DL D V+
Sbjct: 172 CQDDMPMVRRAAATNLGKFAATIESAHLKTDIMSM----FEDLTQDDQDSVRLLAVEGCA 227
Query: 374 GLSPIVGRQNTIEHFLPLFLTQLKDECSEVRLNIISNL 487
L ++ Q+ + H LP+ + +D+ VR + + L
Sbjct: 228 ALGKLLEPQDCVAHILPVIVNFSQDKSWRVRYMVANQL 265
Score = 31.9 bits (69), Expect = 0.32
Identities = 30/159 (18%), Positives = 57/159 (35%)
Frame = +2
Query: 17 ASLLAPEDMEQHVMPTVRARAGDTSWRVRYMVADKFVELQQAVGPELARTDLAQIFQALL 196
A+ + ++ +M D VR + + L + + P+ + +
Sbjct: 191 AATIESAHLKTDIMSMFEDLTQDDQDSVRLLAVEGCAALGKLLEPQDCVAHILPVIVNFS 250
Query: 197 KDSEAEVRAAAAGKVKDFCMNLDKAHQEHIIMTMILPQIKDLVCDANQHVKSGLAFVIMG 376
+D VR A ++ + C +A T ++P L+CD V+ A +
Sbjct: 251 QDKSWRVRYMVANQLYELC----EAVGPEPTRTDLVPAYARLLCDNEAEVRIAAAGKVTK 306
Query: 377 LSPIVGRQNTIEHFLPLFLTQLKDECSEVRLNIISNLEG 493
I+ + I+H LP D VR + S + G
Sbjct: 307 FCRILNPELAIQHILPCVKELSSDSSQHVRSALASVIMG 345
>At1g25490.1 68414.m03165 serine/threonine protein phosphatase 2A
(PP2A) regulatory subunit A (RCN1) identical to
phosphoprotein phosphatase 2A, regulatory subunit A
GI:1262171 from [Arabidopsis thaliana]
Length = 588
Score = 167 bits (405), Expect = 6e-42
Identities = 83/162 (51%), Positives = 113/162 (69%)
Frame = +2
Query: 5 CAVVASLLAPEDMEQHVMPTVRARAGDTSWRVRYMVADKFVELQQAVGPELARTDLAQIF 184
CA + LL P+D ++P + + D SWRVRYMVA++ EL +AVGP+ RTDL +
Sbjct: 226 CAALGKLLEPQDCVARILPVIVNFSQDKSWRVRYMVANQLYELCEAVGPDCTRTDLVPAY 285
Query: 185 QALLKDSEAEVRAAAAGKVKDFCMNLDKAHQEHIIMTMILPQIKDLVCDANQHVKSGLAF 364
LL+D+EAEVR AAAGKV FC L+ + + ILP +K+L D++QHV+S LA
Sbjct: 286 VRLLRDNEAEVRIAAAGKVTKFCRLLN----PELAIQHILPCVKELSSDSSQHVRSALAS 341
Query: 365 VIMGLSPIVGRQNTIEHFLPLFLTQLKDECSEVRLNIISNLE 490
VIMG++PI+G+ +TIEH LP+FL+ LKDE +VRLNIIS L+
Sbjct: 342 VIMGMAPILGKDSTIEHLLPIFLSLLKDEFPDVRLNIISKLD 383
Score = 52.4 bits (120), Expect = 2e-07
Identities = 35/150 (23%), Positives = 66/150 (44%)
Frame = +2
Query: 41 MEQHVMPTVRARAGDTSWRVRYMVADKFVELQQAVGPELARTDLAQIFQALLKDSEAEVR 220
+ Q ++P + A D WRVR + + L +G L + L+D +R
Sbjct: 394 LSQSLLPAIVELAEDRHWRVRLAIIEYVPLLASQLGIGFFDDKLGALCMQWLQDKVYSIR 453
Query: 221 AAAAGKVKDFCMNLDKAHQEHIIMTMILPQIKDLVCDANQHVKSGLAFVIMGLSPIVGRQ 400
AAA +K L + M ++PQ+ D+V + + + + I ++P++G +
Sbjct: 454 EAAANNLK----RLAEEFGPEWAMQHLVPQVLDMVNNPHYLHRMMVLRAISLMAPVMGSE 509
Query: 401 NTIEHFLPLFLTQLKDECSEVRLNIISNLE 490
T FLP+ + KD ++ N+ L+
Sbjct: 510 ITCSKFLPVVVEASKDRVPNIKFNVAKLLQ 539
Score = 40.3 bits (90), Expect = 0.001
Identities = 36/158 (22%), Positives = 62/158 (39%)
Frame = +2
Query: 14 VASLLAPEDMEQHVMPTVRARAGDTSWRVRYMVADKFVELQQAVGPELARTDLAQIFQAL 193
+ S + D+ + +P V+ AG + R F Q ++ +T+L + L
Sbjct: 113 IGSQMKENDLVESFVPLVKRLAGGEWFAARVSACGIFHVAYQGC-TDVLKTELRATYSQL 171
Query: 194 LKDSEAEVRAAAAGKVKDFCMNLDKAHQEHIIMTMILPQIKDLVCDANQHVKSGLAFVIM 373
KD VR AAA + F ++ IMTM DL D V+
Sbjct: 172 CKDDMPMVRRAAASNLGKFATTVESTFLIAEIMTM----FDDLTKDDQDSVRLLAVEGCA 227
Query: 374 GLSPIVGRQNTIEHFLPLFLTQLKDECSEVRLNIISNL 487
L ++ Q+ + LP+ + +D+ VR + + L
Sbjct: 228 ALGKLLEPQDCVARILPVIVNFSQDKSWRVRYMVANQL 265
>At5g16210.1 68418.m01894 HEAT repeat-containing protein contains
Pfam profile PF02985: HEAT repeat
Length = 1180
Score = 35.1 bits (77), Expect = 0.034
Identities = 23/77 (29%), Positives = 36/77 (46%)
Frame = +2
Query: 2 ACAVVASLLAPEDMEQHVMPTVRARAGDTSWRVRYMVADKFVELQQAVGPELARTDLAQI 181
AC ++ + E ++P + T R +VA EL + V PE+ + + I
Sbjct: 516 ACVSLSRNVGEMRTETELLPQCWEQINHTYEERRLLVAQSCGELAEYVRPEIRDSLILSI 575
Query: 182 FQALLKDSEAEVRAAAA 232
Q L++DS VR AAA
Sbjct: 576 VQQLIEDSATVVREAAA 592
>At1g27910.1 68414.m03420 U-box domain-containing protein contains
Pfam profile PF04564: U-box domain
Length = 768
Score = 29.1 bits (62), Expect = 2.3
Identities = 21/116 (18%), Positives = 55/116 (47%), Gaps = 6/116 (5%)
Frame = +2
Query: 170 LAQIFQALLKDSEAEVRAAAAGKVKDFCMNLDKAHQEHIIMTMILPQIKDLVCDANQHVK 349
L Q + L ++ A + A + + ++ ++ ++E ++ + I+P +++++C N H
Sbjct: 469 LLQFLGSALNENNASAQKVGAMALFNLAVDNNR-NKELMLASGIIPLLEEMLC--NPHSH 525
Query: 350 SGLAFVIMGLS------PIVGRQNTIEHFLPLFLTQLKDECSEVRLNIISNLEGGP 499
+ + + LS P++G + + L T+ + +C L+ + +L P
Sbjct: 526 GSVTAIYLNLSCLEEAKPVIGSSLAVPFMVNLLWTETEVQCKVDALHSLFHLSTYP 581
>At3g13330.1 68416.m01678 expressed protein
Length = 1711
Score = 28.3 bits (60), Expect = 4.0
Identities = 21/70 (30%), Positives = 31/70 (44%), Gaps = 3/70 (4%)
Frame = +2
Query: 32 PEDMEQHVMPTVRARAGDTSWRVRYMVADKFVELQQAVGPELARTDLAQIF---QALLKD 202
PE Q V+ + + A D++WR+R L D +I+ + LL D
Sbjct: 1511 PESHLQKVIGVILSSADDSNWRIRSSTLTYLRTFMYRHTFILTHEDKQKIWKTVEKLLVD 1570
Query: 203 SEAEVRAAAA 232
S+ EVR AA
Sbjct: 1571 SQVEVREHAA 1580
>At1g72390.1 68414.m08373 expressed protein
Length = 1088
Score = 28.3 bits (60), Expect = 4.0
Identities = 11/29 (37%), Positives = 17/29 (58%)
Frame = -3
Query: 151 WTNSLLQLYELISDHVPHPPRSISGTSPH 65
W N+LLQ +++ + +P SI SPH
Sbjct: 174 WKNTLLQHQDMLGRSIQYPNTSIQRFSPH 202
>At1g66650.1 68414.m07573 seven in absentia (SINA) protein, putative
similar to SIAH2 protein [Brassica napus var. napus]
GI:7657878; contains Pfam profile PF03145: Seven in
absentia protein family
Length = 329
Score = 27.9 bits (59), Expect = 5.2
Identities = 17/50 (34%), Positives = 20/50 (40%)
Frame = +2
Query: 347 KSGLAFVIMGLSPIVGRQNTIEHFLPLFLTQLKDECSEVRLNIISNLEGG 496
K G FV+ G G T+ H P+ K CS RL S L G
Sbjct: 232 KQGNLFVVQGFIGSHGVYATVSHIAPMVPEVRKFSCSLARLRPYSTLRLG 281
>At3g46170.1 68416.m04996 short-chain dehydrogenase/reductase (SDR)
family protein contains similarity to
3-oxoacyl-[acyl-carrier protein] reductase SP:P51831
from [Bacillus subtilis]
Length = 288
Score = 27.5 bits (58), Expect = 6.9
Identities = 14/55 (25%), Positives = 28/55 (50%)
Frame = +2
Query: 194 LKDSEAEVRAAAAGKVKDFCMNLDKAHQEHIIMTMILPQIKDLVCDANQHVKSGL 358
LKD V A++G ++ C++L KA + I + + ++ L + N +G+
Sbjct: 26 LKDKVVLVTGASSGIGREICLDLGKAGCKIIAVARRVDRLNSLCSEINSSSSTGI 80
>At4g28990.1 68417.m04143 RNA-binding protein-related contains weak
similarity to Swiss-Prot:Q01844 RNA-binding protein EWS
(EWS oncogene)(Ewing sarcoma breakpoint region 1
protein) [Homo sapiens]
Length = 347
Score = 27.1 bits (57), Expect = 9.1
Identities = 11/22 (50%), Positives = 14/22 (63%)
Frame = -2
Query: 506 GYRAPPRGWKLC*VGLRNIHPS 441
GYR+PPRGW R+ HP+
Sbjct: 210 GYRSPPRGWPRDYPPPRHDHPT 231
>At4g10550.1 68417.m01727 subtilase family protein contains
similarity to subtilisin-like protease AIR3 GI:4218991
from [Arabidopsis thaliana]
Length = 778
Score = 27.1 bits (57), Expect = 9.1
Identities = 12/27 (44%), Positives = 16/27 (59%)
Frame = +3
Query: 69 GLVPEILRGGCGTWSLISS*SCNKLLV 149
G VP +GGC T +S +CNK L+
Sbjct: 163 GPVPSHWKGGCETGENFNSSNCNKKLI 189
>At1g72040.1 68414.m08327 deoxynucleoside kinase family contains
Pfam profile: PF01712 deoxynucleoside kinase
Length = 580
Score = 27.1 bits (57), Expect = 9.1
Identities = 20/58 (34%), Positives = 25/58 (43%), Gaps = 4/58 (6%)
Frame = -1
Query: 177 CARSVRASSGPTACCSS--TNLSATMYRTLHEVSPARAR--TVGITCCSISSGASREA 16
C S A TA SS SA + RT+H+ +PA R T G C S + A
Sbjct: 51 CFFSTSAMPTTTASVSSGGVGFSAYLQRTVHKPAPASVRFSTAGYRTCRCSIDGTNRA 108
>At1g64960.1 68414.m07363 expressed protein
Length = 1168
Score = 27.1 bits (57), Expect = 9.1
Identities = 23/102 (22%), Positives = 46/102 (45%)
Frame = +2
Query: 170 LAQIFQALLKDSEAEVRAAAAGKVKDFCMNLDKAHQEHIIMTMILPQIKDLVCDANQHVK 349
L +IF + +S +EVR + + N Q H I+ +ILP++ L+ D+ V+
Sbjct: 434 LTKIFDDMSHESCSEVRLSTVNGITYLLAN----PQSHGILKVILPRLGHLMLDSVTSVR 489
Query: 350 SGLAFVIMGLSPIVGRQNTIEHFLPLFLTQLKDECSEVRLNI 475
+ +++ + + Q L + L+ L + + V I
Sbjct: 490 VAMVDLLLLIRDVRAFQFNTVVSLDVLLSVLASDQTHVAKGI 531
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,722,583
Number of Sequences: 28952
Number of extensions: 290052
Number of successful extensions: 848
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 811
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 840
length of database: 12,070,560
effective HSP length: 77
effective length of database: 9,841,256
effective search space used: 1141585696
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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