Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-1008
         (688 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q7Q7H1 Cluster: ENSANGP00000021126; n=1; Anopheles gamb...    80   4e-14
UniRef50_Q17KG8 Cluster: Putative uncharacterized protein; n=1; ...    75   2e-12
UniRef50_UPI0000D566E0 Cluster: PREDICTED: hypothetical protein;...    71   3e-11
UniRef50_Q28ZR9 Cluster: GA13869-PA; n=1; Drosophila pseudoobscu...    57   4e-07
UniRef50_Q86QT5 Cluster: Putative uncharacterized protein; n=1; ...    56   8e-07
UniRef50_Q4V664 Cluster: IP05760p; n=1; Drosophila melanogaster|...    55   2e-06
UniRef50_Q86QT4 Cluster: Putative uncharacterized protein; n=1; ...    45   0.002
UniRef50_A1C6P2 Cluster: C6 zinc finger domain protein; n=3; Tri...    33   6.5  
UniRef50_Q3IT88 Cluster: Conserved cobalamin operon protein; n=3...    33   6.5  

>UniRef50_Q7Q7H1 Cluster: ENSANGP00000021126; n=1; Anopheles gambiae
           str. PEST|Rep: ENSANGP00000021126 - Anopheles gambiae
           str. PEST
          Length = 108

 Score = 80.2 bits (189), Expect = 4e-14
 Identities = 35/57 (61%), Positives = 46/57 (80%)
 Frame = -3

Query: 683 WKFDPDVAKKRREQFIELHGDKGERLIERLGLGIDGDSGRRLEDQRKRDEGYLGGIN 513
           + FDP+++KKRRE + ELHG +GE++IERLGLGIDG    RL  QR+RDEG+L G+N
Sbjct: 48  YDFDPEISKKRRELYYELHGYRGEKVIERLGLGIDGKHHERLAFQRQRDEGHLQGLN 104


>UniRef50_Q17KG8 Cluster: Putative uncharacterized protein; n=1;
           Aedes aegypti|Rep: Putative uncharacterized protein -
           Aedes aegypti (Yellowfever mosquito)
          Length = 170

 Score = 74.5 bits (175), Expect = 2e-12
 Identities = 33/55 (60%), Positives = 41/55 (74%)
 Frame = -3

Query: 677 FDPDVAKKRREQFIELHGDKGERLIERLGLGIDGDSGRRLEDQRKRDEGYLGGIN 513
           FDP+V++KRRE + E HG +GE+ IERLGLGIDG    R   QR RDEG+L G+N
Sbjct: 112 FDPEVSQKRRELYYEQHGYRGEKAIERLGLGIDGKHRERAAQQRARDEGHLNGLN 166


>UniRef50_UPI0000D566E0 Cluster: PREDICTED: hypothetical protein;
           n=1; Tribolium castaneum|Rep: PREDICTED: hypothetical
           protein - Tribolium castaneum
          Length = 101

 Score = 70.9 bits (166), Expect = 3e-11
 Identities = 33/56 (58%), Positives = 39/56 (69%)
 Frame = -3

Query: 683 WKFDPDVAKKRREQFIELHGDKGERLIERLGLGIDGDSGRRLEDQRKRDEGYLGGI 516
           W FDPDVA +R  Q+ EL+G  G + IERLGLGIDG    RL  QR RDEG+L G+
Sbjct: 44  WDFDPDVAIRRSRQYQELNGRYGAKAIERLGLGIDGYDRERLAQQRLRDEGHLNGL 99


>UniRef50_Q28ZR9 Cluster: GA13869-PA; n=1; Drosophila
           pseudoobscura|Rep: GA13869-PA - Drosophila pseudoobscura
           (Fruit fly)
          Length = 104

 Score = 57.2 bits (132), Expect = 4e-07
 Identities = 27/55 (49%), Positives = 32/55 (58%)
 Frame = -3

Query: 683 WKFDPDVAKKRREQFIELHGDKGERLIERLGLGIDGDSGRRLEDQRKRDEGYLGG 519
           W FDPD AKK R  + E +G +  + IERLG G+DG    R   Q  RD G LGG
Sbjct: 40  WNFDPDAAKKARSLYYEKNGYRSSKFIERLGAGVDGLHEERRLQQAIRDMGRLGG 94


>UniRef50_Q86QT5 Cluster: Putative uncharacterized protein; n=1;
           Bombyx mori|Rep: Putative uncharacterized protein -
           Bombyx mori (Silk moth)
          Length = 77

 Score = 56.0 bits (129), Expect = 8e-07
 Identities = 28/42 (66%), Positives = 30/42 (71%)
 Frame = -1

Query: 430 LADPADFVVPQSINKIPKVLYKINLKQKKESVHRGTHQRENK 305
           LADPADFVVPQSINK PK LYKINLKQ K     G   +E +
Sbjct: 22  LADPADFVVPQSINKRPKHLYKINLKQTKGIRQTGDTSKEKQ 63


>UniRef50_Q4V664 Cluster: IP05760p; n=1; Drosophila
           melanogaster|Rep: IP05760p - Drosophila melanogaster
           (Fruit fly)
          Length = 119

 Score = 54.8 bits (126), Expect = 2e-06
 Identities = 24/55 (43%), Positives = 33/55 (60%)
 Frame = -3

Query: 683 WKFDPDVAKKRREQFIELHGDKGERLIERLGLGIDGDSGRRLEDQRKRDEGYLGG 519
           W FDP+ AK+ R  + E +G +  + IERLG+G+DG    R  +Q  RD G L G
Sbjct: 54  WDFDPEAAKRARSLYYEKNGFRSSKFIERLGVGLDGRHEERRAEQGHRDVGRLNG 108


>UniRef50_Q86QT4 Cluster: Putative uncharacterized protein; n=1;
           Bombyx mori|Rep: Putative uncharacterized protein -
           Bombyx mori (Silk moth)
          Length = 47

 Score = 45.2 bits (102), Expect = 0.002
 Identities = 22/27 (81%), Positives = 24/27 (88%)
 Frame = +2

Query: 176 LKLENGWTDLANFGLELFVKVEFEGLK 256
           LKLENGWTDLANFGLEL V+V+  GLK
Sbjct: 20  LKLENGWTDLANFGLELPVEVQ-RGLK 45


>UniRef50_A1C6P2 Cluster: C6 zinc finger domain protein; n=3;
           Trichocomaceae|Rep: C6 zinc finger domain protein -
           Aspergillus clavatus
          Length = 524

 Score = 33.1 bits (72), Expect = 6.5
 Identities = 15/39 (38%), Positives = 21/39 (53%)
 Frame = -2

Query: 351 KKRNPSIEGHIKGKTKFNFEHFHIHLTYLILPFKPSNST 235
           K R  +  GH +G+  FNF + H H  +L+L  KP   T
Sbjct: 229 KLRGVNQFGHAQGRDLFNFAYAHTHTEFLVLGDKPRFKT 267


>UniRef50_Q3IT88 Cluster: Conserved cobalamin operon protein; n=3;
           Halobacteriaceae|Rep: Conserved cobalamin operon protein
           - Natronomonas pharaonis (strain DSM 2160 / ATCC 35678)
          Length = 222

 Score = 33.1 bits (72), Expect = 6.5
 Identities = 17/54 (31%), Positives = 25/54 (46%), Gaps = 1/54 (1%)
 Frame = -3

Query: 674 DPDVAKKRREQFIELHGDKGERLIERLGLGIDGD-SGRRLEDQRKRDEGYLGGI 516
           D  + +      ++LHG  G+R    LGL  +GD  G RL+     D   L G+
Sbjct: 70  DTSITRNEDRYTVQLHGPVGDRAAAALGLPFEGDPGGYRLDTLTTHDRQLLRGL 123


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 616,639,871
Number of Sequences: 1657284
Number of extensions: 11445618
Number of successful extensions: 28078
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 27268
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 28072
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 53719013270
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)