Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-1008
         (688 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT022442-1|AAY54858.1|  119|Drosophila melanogaster IP05760p pro...    55   1e-07
BT022425-1|AAY54841.1|  119|Drosophila melanogaster IP05660p pro...    55   1e-07
AE013599-3090|AAF46644.2|  119|Drosophila melanogaster CG15649-P...    55   1e-07
AY089362-1|AAL90100.1|  470|Drosophila melanogaster AT18578p pro...    29   4.5  
AE013599-3117|AAM68191.1|  470|Drosophila melanogaster CG30293-P...    29   4.5  

>BT022442-1|AAY54858.1|  119|Drosophila melanogaster IP05760p
           protein.
          Length = 119

 Score = 54.8 bits (126), Expect = 1e-07
 Identities = 24/55 (43%), Positives = 33/55 (60%)
 Frame = -3

Query: 683 WKFDPDVAKKRREQFIELHGDKGERLIERLGLGIDGDSGRRLEDQRKRDEGYLGG 519
           W FDP+ AK+ R  + E +G +  + IERLG+G+DG    R  +Q  RD G L G
Sbjct: 54  WDFDPEAAKRARSLYYEKNGFRSSKFIERLGVGLDGRHEERRAEQGHRDVGRLNG 108


>BT022425-1|AAY54841.1|  119|Drosophila melanogaster IP05660p
           protein.
          Length = 119

 Score = 54.8 bits (126), Expect = 1e-07
 Identities = 24/55 (43%), Positives = 33/55 (60%)
 Frame = -3

Query: 683 WKFDPDVAKKRREQFIELHGDKGERLIERLGLGIDGDSGRRLEDQRKRDEGYLGG 519
           W FDP+ AK+ R  + E +G +  + IERLG+G+DG    R  +Q  RD G L G
Sbjct: 54  WDFDPEAAKRARSLYYEKNGFRSSKFIERLGVGLDGRHEERRAEQGHRDVGRLNG 108


>AE013599-3090|AAF46644.2|  119|Drosophila melanogaster CG15649-PA
           protein.
          Length = 119

 Score = 54.8 bits (126), Expect = 1e-07
 Identities = 24/55 (43%), Positives = 33/55 (60%)
 Frame = -3

Query: 683 WKFDPDVAKKRREQFIELHGDKGERLIERLGLGIDGDSGRRLEDQRKRDEGYLGG 519
           W FDP+ AK+ R  + E +G +  + IERLG+G+DG    R  +Q  RD G L G
Sbjct: 54  WDFDPEAAKRARSLYYEKNGFRSSKFIERLGVGLDGRHEERRAEQGHRDVGRLNG 108


>AY089362-1|AAL90100.1|  470|Drosophila melanogaster AT18578p
           protein.
          Length = 470

 Score = 29.5 bits (63), Expect = 4.5
 Identities = 17/39 (43%), Positives = 22/39 (56%), Gaps = 3/39 (7%)
 Frame = -3

Query: 656 KRREQFIELHGDKG--ERLIERLGLGIDGDSGR-RLEDQ 549
           K R QF E H D      L+   G+G+DGDSG  R+ D+
Sbjct: 37  KGRSQFFEWHLDSRLCTHLVLGSGIGVDGDSGELRITDK 75


>AE013599-3117|AAM68191.1|  470|Drosophila melanogaster CG30293-PA
           protein.
          Length = 470

 Score = 29.5 bits (63), Expect = 4.5
 Identities = 17/39 (43%), Positives = 22/39 (56%), Gaps = 3/39 (7%)
 Frame = -3

Query: 656 KRREQFIELHGDKG--ERLIERLGLGIDGDSGR-RLEDQ 549
           K R QF E H D      L+   G+G+DGDSG  R+ D+
Sbjct: 37  KGRSQFFEWHLDSRLCTHLVLGSGIGVDGDSGELRITDK 75


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 26,890,694
Number of Sequences: 53049
Number of extensions: 500651
Number of successful extensions: 1101
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1062
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1101
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 3013199100
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)