Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-1006
         (502 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

M93690-2|AAA29363.1| 1212|Anopheles gambiae unknown protein.           24   3.3  
EF426186-1|ABO26429.1|  133|Anopheles gambiae unknown protein.         23   4.4  
AJ439353-10|CAD27932.1| 3325|Anopheles gambiae F25C8.3 protein p...    23   7.7  

>M93690-2|AAA29363.1| 1212|Anopheles gambiae unknown protein.
          Length = 1212

 Score = 23.8 bits (49), Expect = 3.3
 Identities = 11/26 (42%), Positives = 14/26 (53%)
 Frame = -2

Query: 480 GYRAPPRDISSKVSSIVTTAAPPFEP 403
           G RAPP    +++ SIVT   P   P
Sbjct: 430 GGRAPPETERARLESIVTELFPQHPP 455


>EF426186-1|ABO26429.1|  133|Anopheles gambiae unknown protein.
          Length = 133

 Score = 23.4 bits (48), Expect = 4.4
 Identities = 11/26 (42%), Positives = 15/26 (57%)
 Frame = +2

Query: 404 GSKGGAAVVTILETLELISRGGARYP 481
           G +GG ++ T L  L    + GARYP
Sbjct: 35  GIEGGHSIGTSLGVLRTFYQLGARYP 60


>AJ439353-10|CAD27932.1| 3325|Anopheles gambiae F25C8.3 protein
            protein.
          Length = 3325

 Score = 22.6 bits (46), Expect = 7.7
 Identities = 12/38 (31%), Positives = 18/38 (47%)
 Frame = +2

Query: 368  PAYFCREAVIRFGSKGGAAVVTILETLELISRGGARYP 481
            PA+FC   V     +  + + +I   LE I  G A +P
Sbjct: 2711 PAFFCSNVVRLVALQVVSPIDSISHGLEQICGGSADFP 2748


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 508,851
Number of Sequences: 2352
Number of extensions: 9876
Number of successful extensions: 23
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 23
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 23
length of database: 563,979
effective HSP length: 60
effective length of database: 422,859
effective search space used: 44823054
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)