Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-1002
         (522 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U50479-1|AAA93478.1|  151|Anopheles gambiae protein ( Anopheles ...    23   6.2  
AY135184-1|AAN17505.1| 1009|Anopheles gambiae laccase 1 protein.       23   6.2  
AY146755-1|AAO12070.1|  320|Anopheles gambiae odorant-binding pr...    23   8.2  
AY146754-1|AAO12069.1|  334|Anopheles gambiae odorant-binding pr...    23   8.2  

>U50479-1|AAA93478.1|  151|Anopheles gambiae protein ( Anopheles
           gambiae putativeribosomal protein S13 mRNA, complete
           cds. ).
          Length = 151

 Score = 23.0 bits (47), Expect = 6.2
 Identities = 8/19 (42%), Positives = 14/19 (73%)
 Frame = -1

Query: 78  NGDRCLRVLKAPRVNPENP 22
           NG++ LR++KA  + P+ P
Sbjct: 67  NGNKVLRIMKAVGLKPDIP 85


>AY135184-1|AAN17505.1| 1009|Anopheles gambiae laccase 1 protein.
          Length = 1009

 Score = 23.0 bits (47), Expect = 6.2
 Identities = 24/78 (30%), Positives = 30/78 (38%)
 Frame = -2

Query: 449  MGERAHSPPYVKWLPEPIDINDVNTPPTLRYKF*GLKYSYNGCPTLLTETHY*FKAEIVR 270
            M E    P  +K  P    I D  T P   Y    +++  N     L   H  F AEI  
Sbjct: 895  MDEEGRLPRRLKRAP----IKDTVTIPDGGYTI--IRFIANNPGYWLFHCHIEFHAEIGM 948

Query: 269  VVVPTRADSQEVLPPVMN 216
             +V    DS E+LP   N
Sbjct: 949  SLVLKVGDSSEMLPAPAN 966


>AY146755-1|AAO12070.1|  320|Anopheles gambiae odorant-binding
           protein AgamOBP32 protein.
          Length = 320

 Score = 22.6 bits (46), Expect = 8.2
 Identities = 9/17 (52%), Positives = 12/17 (70%)
 Frame = +3

Query: 246 VSTGRYYHPDYFCLKSV 296
           V+ G + H DY+ LKSV
Sbjct: 19  VTAGSHCHNDYYQLKSV 35


>AY146754-1|AAO12069.1|  334|Anopheles gambiae odorant-binding
           protein AgamOBP33 protein.
          Length = 334

 Score = 22.6 bits (46), Expect = 8.2
 Identities = 9/17 (52%), Positives = 12/17 (70%)
 Frame = +3

Query: 246 VSTGRYYHPDYFCLKSV 296
           V+ G + H DY+ LKSV
Sbjct: 19  VTAGSHCHNDYYQLKSV 35


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 517,622
Number of Sequences: 2352
Number of extensions: 9609
Number of successful extensions: 10
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 563,979
effective HSP length: 60
effective length of database: 422,859
effective search space used: 47783067
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)