Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-1002
         (522 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF217994-1|AAG17236.1|  353|Homo sapiens unknown protein.              33   0.80 
BC047051-1|AAH47051.1|  498|Homo sapiens KIFC3 protein protein.        29   9.9  
BC034234-1|AAH34234.1|  687|Homo sapiens KIFC3 protein protein.        29   9.9  
BC008014-1|AAH08014.1|  553|Homo sapiens Similar to kinesin fami...    29   9.9  
BC001211-1|AAH01211.2|  833|Homo sapiens kinesin family member C...    29   9.9  
AL122010-1|CAI23556.1|  979|Homo sapiens discs, large (Drosophil...    29   9.9  
AF004426-1|AAC24153.1|  687|Homo sapiens microtubule-based motor...    29   9.9  
AB209290-1|BAD92527.1|  870|Homo sapiens Kinesin-like protein KI...    29   9.9  

>AF217994-1|AAG17236.1|  353|Homo sapiens unknown protein.
          Length = 353

 Score = 32.7 bits (71), Expect = 0.80
 Identities = 13/15 (86%), Positives = 14/15 (93%)
 Frame = +3

Query: 462 KKKKKNSRGGPVPNS 506
           KKKKKNSRGGPVP +
Sbjct: 46  KKKKKNSRGGPVPGN 60


>BC047051-1|AAH47051.1|  498|Homo sapiens KIFC3 protein protein.
          Length = 498

 Score = 29.1 bits (62), Expect = 9.9
 Identities = 17/46 (36%), Positives = 24/46 (52%)
 Frame = -2

Query: 368 TLRYKF*GLKYSYNGCPTLLTETHY*FKAEIVRVVVPTRADSQEVL 231
           TL   + GLK    G P LL E     KAEI + +    +++QE+L
Sbjct: 238 TLTNDYNGLKRQVRGFPLLLQEALRSVKAEIGQAIEEVNSNNQELL 283


>BC034234-1|AAH34234.1|  687|Homo sapiens KIFC3 protein protein.
          Length = 687

 Score = 29.1 bits (62), Expect = 9.9
 Identities = 17/46 (36%), Positives = 24/46 (52%)
 Frame = -2

Query: 368 TLRYKF*GLKYSYNGCPTLLTETHY*FKAEIVRVVVPTRADSQEVL 231
           TL   + GLK    G P LL E     KAEI + +    +++QE+L
Sbjct: 238 TLTNDYNGLKRQVRGFPLLLQEALRSVKAEIGQAIEEVNSNNQELL 283


>BC008014-1|AAH08014.1|  553|Homo sapiens Similar to kinesin family
           member C3 protein.
          Length = 553

 Score = 29.1 bits (62), Expect = 9.9
 Identities = 17/46 (36%), Positives = 24/46 (52%)
 Frame = -2

Query: 368 TLRYKF*GLKYSYNGCPTLLTETHY*FKAEIVRVVVPTRADSQEVL 231
           TL   + GLK    G P LL E     KAEI + +    +++QE+L
Sbjct: 97  TLTNDYNGLKRQVRGFPLLLQEALRSVKAEIGQAIEEVNSNNQELL 142


>BC001211-1|AAH01211.2|  833|Homo sapiens kinesin family member C3
           protein.
          Length = 833

 Score = 29.1 bits (62), Expect = 9.9
 Identities = 17/46 (36%), Positives = 24/46 (52%)
 Frame = -2

Query: 368 TLRYKF*GLKYSYNGCPTLLTETHY*FKAEIVRVVVPTRADSQEVL 231
           TL   + GLK    G P LL E     KAEI + +    +++QE+L
Sbjct: 377 TLTNDYNGLKRQVRGFPLLLQEALRSVKAEIGQAIEEVNSNNQELL 422


>AL122010-1|CAI23556.1|  979|Homo sapiens discs, large (Drosophila)
           homolog-associated protein 3 protein.
          Length = 979

 Score = 29.1 bits (62), Expect = 9.9
 Identities = 16/48 (33%), Positives = 23/48 (47%)
 Frame = -1

Query: 285 GRNSQGGSTYPC*LTRGPTTSNEH*P*QEQLFAESTTGSQSRSGKKLG 142
           GR   GG +YP   + GP TS+ H         +S  G +S+S  + G
Sbjct: 202 GRGGSGGDSYPGPGSGGPHTSHHHHHHHHHHHHQSRHGKRSKSKDRKG 249


>AF004426-1|AAC24153.1|  687|Homo sapiens microtubule-based motor
           protein.
          Length = 687

 Score = 29.1 bits (62), Expect = 9.9
 Identities = 17/46 (36%), Positives = 24/46 (52%)
 Frame = -2

Query: 368 TLRYKF*GLKYSYNGCPTLLTETHY*FKAEIVRVVVPTRADSQEVL 231
           TL   + GLK    G P LL E     KAEI + +    +++QE+L
Sbjct: 238 TLTNDYNGLKRQVRGFPLLLQEALRSVKAEIGQAIEEVNSNNQELL 283


>AB209290-1|BAD92527.1|  870|Homo sapiens Kinesin-like protein KIFC3
           variant protein.
          Length = 870

 Score = 29.1 bits (62), Expect = 9.9
 Identities = 17/46 (36%), Positives = 24/46 (52%)
 Frame = -2

Query: 368 TLRYKF*GLKYSYNGCPTLLTETHY*FKAEIVRVVVPTRADSQEVL 231
           TL   + GLK    G P LL E     KAEI + +    +++QE+L
Sbjct: 421 TLTNDYNGLKRQVRGFPLLLQEALRSVKAEIGQAIEEVNSNNQELL 466


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 74,320,760
Number of Sequences: 237096
Number of extensions: 1507290
Number of successful extensions: 2640
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 2591
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2640
length of database: 76,859,062
effective HSP length: 85
effective length of database: 56,705,902
effective search space used: 4990119376
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)