Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-1002
         (522 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE013599-2202|AAF58053.1| 1173|Drosophila melanogaster CG8434-PA...    30   1.7  
AY051414-1|AAK92838.1|  821|Drosophila melanogaster GH09326p pro...    29   3.8  
AE014297-2099|AAF55244.2| 1417|Drosophila melanogaster CG31183-P...    29   3.8  

>AE013599-2202|AAF58053.1| 1173|Drosophila melanogaster CG8434-PA
           protein.
          Length = 1173

 Score = 30.3 bits (65), Expect = 1.7
 Identities = 20/56 (35%), Positives = 26/56 (46%)
 Frame = -1

Query: 315 PSNRNALLI*GRNSQGGSTYPC*LTRGPTTSNEH*P*QEQLFAESTTGSQSRSGKK 148
           PS+ N   + G  S GGS     L  G  + N+  P Q+QLFA  T      SG +
Sbjct: 70  PSSSNGNGVGGSGSTGGSPLSALLKSGGASYNQQLP-QQQLFAMLTRNGGGSSGPR 124


>AY051414-1|AAK92838.1|  821|Drosophila melanogaster GH09326p
           protein.
          Length = 821

 Score = 29.1 bits (62), Expect = 3.8
 Identities = 10/24 (41%), Positives = 16/24 (66%)
 Frame = -2

Query: 233 LPPVMNTSPNKSNSSQNLPPDRNH 162
           +P ++  SP +S S QN+P D +H
Sbjct: 768 IPQMVAASPQRSGSGQNIPADSSH 791


>AE014297-2099|AAF55244.2| 1417|Drosophila melanogaster CG31183-PA
            protein.
          Length = 1417

 Score = 29.1 bits (62), Expect = 3.8
 Identities = 10/24 (41%), Positives = 16/24 (66%)
 Frame = -2

Query: 233  LPPVMNTSPNKSNSSQNLPPDRNH 162
            +P ++  SP +S S QN+P D +H
Sbjct: 1364 IPQMVAASPQRSGSGQNIPADSSH 1387


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,963,935
Number of Sequences: 53049
Number of extensions: 458754
Number of successful extensions: 1104
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 1049
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1103
length of database: 24,988,368
effective HSP length: 80
effective length of database: 20,744,448
effective search space used: 1929233664
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)