Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-1000
         (570 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U24676-1|AAC46963.1|  148|Drosophila melanogaster twinstar protein.   114   7e-26
U24490-1|AAC46962.1|  148|Drosophila melanogaster twinstar protein.   114   7e-26
U08217-1|AAA19856.1|  148|Drosophila melanogaster protein ( Dros...   114   7e-26
AE013599-3787|AAF47146.1|  148|Drosophila melanogaster CG4254-PA...   114   7e-26
AE014298-2759|AAF48877.1|  148|Drosophila melanogaster CG6873-PA...    70   3e-12

>U24676-1|AAC46963.1|  148|Drosophila melanogaster twinstar protein.
          Length = 148

 Score =  114 bits (275), Expect = 7e-26
 Identities = 51/57 (89%), Positives = 55/57 (96%)
 Frame = +2

Query: 398 MASGVTVSDACKTTYEEIKKDKKHRYVVFYIRDEKQIDVETVGERNAEYEQFLEDLQ 568
           MASGVTVSD CKTTYEEIKKDKKHRYV+FYIRDEKQIDVETV +RNAEY+QFLED+Q
Sbjct: 1   MASGVTVSDVCKTTYEEIKKDKKHRYVIFYIRDEKQIDVETVADRNAEYDQFLEDIQ 57


>U24490-1|AAC46962.1|  148|Drosophila melanogaster twinstar protein.
          Length = 148

 Score =  114 bits (275), Expect = 7e-26
 Identities = 51/57 (89%), Positives = 55/57 (96%)
 Frame = +2

Query: 398 MASGVTVSDACKTTYEEIKKDKKHRYVVFYIRDEKQIDVETVGERNAEYEQFLEDLQ 568
           MASGVTVSD CKTTYEEIKKDKKHRYV+FYIRDEKQIDVETV +RNAEY+QFLED+Q
Sbjct: 1   MASGVTVSDVCKTTYEEIKKDKKHRYVIFYIRDEKQIDVETVADRNAEYDQFLEDIQ 57


>U08217-1|AAA19856.1|  148|Drosophila melanogaster protein (
           Drosophila melanogastercofilin/actin depolymerizing
           factor homolog mRNA, completecds. ).
          Length = 148

 Score =  114 bits (275), Expect = 7e-26
 Identities = 51/57 (89%), Positives = 55/57 (96%)
 Frame = +2

Query: 398 MASGVTVSDACKTTYEEIKKDKKHRYVVFYIRDEKQIDVETVGERNAEYEQFLEDLQ 568
           MASGVTVSD CKTTYEEIKKDKKHRYV+FYIRDEKQIDVETV +RNAEY+QFLED+Q
Sbjct: 1   MASGVTVSDVCKTTYEEIKKDKKHRYVIFYIRDEKQIDVETVADRNAEYDQFLEDIQ 57


>AE013599-3787|AAF47146.1|  148|Drosophila melanogaster CG4254-PA
           protein.
          Length = 148

 Score =  114 bits (275), Expect = 7e-26
 Identities = 51/57 (89%), Positives = 55/57 (96%)
 Frame = +2

Query: 398 MASGVTVSDACKTTYEEIKKDKKHRYVVFYIRDEKQIDVETVGERNAEYEQFLEDLQ 568
           MASGVTVSD CKTTYEEIKKDKKHRYV+FYIRDEKQIDVETV +RNAEY+QFLED+Q
Sbjct: 1   MASGVTVSDVCKTTYEEIKKDKKHRYVIFYIRDEKQIDVETVADRNAEYDQFLEDIQ 57


>AE014298-2759|AAF48877.1|  148|Drosophila melanogaster CG6873-PA
           protein.
          Length = 148

 Score = 69.7 bits (163), Expect = 3e-12
 Identities = 30/57 (52%), Positives = 42/57 (73%)
 Frame = +2

Query: 398 MASGVTVSDACKTTYEEIKKDKKHRYVVFYIRDEKQIDVETVGERNAEYEQFLEDLQ 568
           MASG+ +S  C+  +E+I+K K+HRY VF I+DE++I VE +G R A Y+ FL DLQ
Sbjct: 1   MASGINLSRECQHVFEQIRKLKQHRYAVFVIQDEREIKVEVLGVREANYDDFLADLQ 57


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,285,607
Number of Sequences: 53049
Number of extensions: 364096
Number of successful extensions: 989
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 974
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 989
length of database: 24,988,368
effective HSP length: 81
effective length of database: 20,691,399
effective search space used: 2234671092
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)