Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-0999
         (690 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

09_06_0242 - 21806370-21806483,21806574-21806660,21806865-218069...    54   1e-07
09_06_0351 + 22466160-22466217,22466514-22467052,22467186-224672...    50   2e-06
01_01_1227 + 9912646-9913056,9913306-9913413,9913517-9913672,991...    50   2e-06
11_01_0557 + 4394754-4396040                                           43   5e-05
01_06_1363 - 36681605-36681789,36681875-36681908,36682017-366821...    36   0.030
05_05_0059 + 22011168-22011662,22012668-22012894,22013029-220133...    36   0.040
09_04_0529 + 18356964-18358307,18359829-18359944,18360036-183601...    28   6.1  

>09_06_0242 -
           21806370-21806483,21806574-21806660,21806865-21806917,
           21806999-21807140,21807406-21807501,21808617-21808785,
           21808859-21808939,21809032-21809106,21810322-21810387,
           21811013-21811158,21811898-21812344
          Length = 491

 Score = 54.0 bits (124), Expect = 1e-07
 Identities = 25/66 (37%), Positives = 40/66 (60%)
 Frame = +3

Query: 456 CSSGDVTGNETEIPKPYAIFNWNETTQGLILGGFYFGYAATQVPGGYLAEKYRGKWTLGL 635
           C+   V  +   IP  +  + WN +T GL+   F++GYA +Q+PGG+LA+ + G+  L +
Sbjct: 145 CNMDKVNLSVAIIPMSHQ-YGWNSSTAGLVQSSFFWGYALSQLPGGWLAKLFGGRRVLEI 203

Query: 636 GVVEHS 653
           GVV  S
Sbjct: 204 GVVAWS 209


>09_06_0351 +
           22466160-22466217,22466514-22467052,22467186-22467293,
           22467391-22467546,22467916-22468131,22468639-22468776,
           22468880-22468981,22469089-22469146,22469346-22469408,
           22469543-22469640
          Length = 511

 Score = 49.6 bits (113), Expect = 2e-06
 Identities = 21/44 (47%), Positives = 28/44 (63%)
 Frame = +3

Query: 513 FNWNETTQGLILGGFYFGYAATQVPGGYLAEKYRGKWTLGLGVV 644
           F W+  T GLI   F++GY  TQ+ GG  A+++ GK  LG GVV
Sbjct: 213 FGWSPATVGLIQSSFFWGYLLTQILGGIWADRFGGKVVLGFGVV 256


>01_01_1227 +
           9912646-9913056,9913306-9913413,9913517-9913672,
           9914110-9914325,9914436-9914645,9914722-9914859,
           9915076-9915177,9915508-9915603
          Length = 478

 Score = 49.6 bits (113), Expect = 2e-06
 Identities = 22/46 (47%), Positives = 27/46 (58%)
 Frame = +3

Query: 507 AIFNWNETTQGLILGGFYFGYAATQVPGGYLAEKYRGKWTLGLGVV 644
           A F WN  T GLI   F++GY  TQ+ GG  A+   GK  LG GV+
Sbjct: 149 AEFGWNPQTVGLIQSSFFWGYLLTQIAGGIWADTVGGKTVLGFGVI 194


>11_01_0557 + 4394754-4396040
          Length = 428

 Score = 43.2 bits (97), Expect(2) = 5e-05
 Identities = 17/41 (41%), Positives = 27/41 (65%)
 Frame = +3

Query: 522 NETTQGLILGGFYFGYAATQVPGGYLAEKYRGKWTLGLGVV 644
           N+  +G+IL  FY+GY  +Q+PGG+ A++  G+  L L  V
Sbjct: 41  NQANKGMILSMFYYGYVLSQIPGGWAAQRLGGRLVLLLSFV 81



 Score = 21.4 bits (43), Expect(2) = 5e-05
 Identities = 11/41 (26%), Positives = 20/41 (48%)
 Frame = +3

Query: 315 PQRYILGVMGLMGVCNAYTMRVCLNLAITQMVNKTITNETH 437
           P+RY + ++  M     Y  RV  ++A T   +   TN+ +
Sbjct: 4   PKRYAIVLLTFMCTNVCYIERVGFSIAYTVAADAVGTNQAN 44


>01_06_1363 -
           36681605-36681789,36681875-36681908,36682017-36682154,
           36682578-36682724,36682821-36682865,36683043-36683331,
           36683443-36683669,36684109-36684528
          Length = 494

 Score = 35.9 bits (79), Expect = 0.030
 Identities = 17/62 (27%), Positives = 30/62 (48%)
 Frame = +3

Query: 456 CSSGDVTGNETEIPKPYAIFNWNETTQGLILGGFYFGYAATQVPGGYLAEKYRGKWTLGL 635
           C++  V  +   +P   A + W  +  G++   F +GY  + + GG L + Y GK  +  
Sbjct: 111 CNADRVVMSVAIVPLSQA-YGWTPSFAGVVQSSFLWGYLVSPIIGGALVDYYGGKRVMAY 169

Query: 636 GV 641
           GV
Sbjct: 170 GV 171


>05_05_0059 +
           22011168-22011662,22012668-22012894,22013029-22013377,
           22013464-22013508,22013589-22013735,22013851-22013988,
           22014126-22014159,22014258-22014430
          Length = 535

 Score = 35.5 bits (78), Expect = 0.040
 Identities = 14/41 (34%), Positives = 25/41 (60%), Gaps = 1/41 (2%)
 Frame = +3

Query: 501 PYAI-FNWNETTQGLILGGFYFGYAATQVPGGYLAEKYRGK 620
           P+A  + W+ +  G++   F +GY  + + GG LA++Y GK
Sbjct: 149 PFAAQYGWSSSFLGIVQSSFLWGYVFSSMVGGALADRYGGK 189


>09_04_0529 +
           18356964-18358307,18359829-18359944,18360036-18360133,
           18360234-18360418
          Length = 580

 Score = 28.3 bits (60), Expect = 6.1
 Identities = 22/77 (28%), Positives = 34/77 (44%), Gaps = 8/77 (10%)
 Frame = +3

Query: 282 LTKRLRSCCIIPQR--YILGVMGLMGVC------NAYTMRVCLNLAITQMVNKTITNETH 437
           L+ R   CC+IP+   Y+ G  GL          N + + V    A  +++ +T T    
Sbjct: 276 LSSRDVDCCLIPEEDFYLRGAGGLFDFLYRRIKDNGHAVVVVAEGAGQRLIPRTTTTSAS 335

Query: 438 AIDPYACSSGDVTGNET 488
                AC+  D +GNET
Sbjct: 336 G----ACAGADESGNET 348


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,643,720
Number of Sequences: 37544
Number of extensions: 437652
Number of successful extensions: 1026
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 991
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1026
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1756684372
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)