Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-0999
(690 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z19153-2|CAA79549.1| 493|Caenorhabditis elegans Hypothetical pr... 58 6e-09
U58737-2|AAM69081.1| 479|Caenorhabditis elegans Hypothetical pr... 58 6e-09
U58737-1|ABC48238.1| 474|Caenorhabditis elegans Hypothetical pr... 58 6e-09
Z83236-1|CAB05777.1| 445|Caenorhabditis elegans Hypothetical pr... 42 3e-04
Z48055-10|CAA88135.1| 573|Caenorhabditis elegans Hypothetical p... 41 0.001
Z36282-3|CAA85289.1| 573|Caenorhabditis elegans Hypothetical pr... 41 0.001
Z48055-1|CAA88134.1| 544|Caenorhabditis elegans Hypothetical pr... 40 0.002
Z22177-5|CAA80150.1| 576|Caenorhabditis elegans Hypothetical pr... 39 0.003
AF095787-1|AAC64972.1| 563|Caenorhabditis elegans EAT-4 protein. 39 0.003
Z47070-1|CAA87340.1| 516|Caenorhabditis elegans Hypothetical pr... 33 0.15
AL023845-4|CAA19541.1| 516|Caenorhabditis elegans Hypothetical ... 32 0.44
U28735-4|AAF99953.1| 488|Caenorhabditis elegans Hypothetical pr... 31 1.0
Z68760-4|CAE17822.1| 160|Caenorhabditis elegans Hypothetical pr... 28 5.5
U56860-5|AAP40524.1| 685|Caenorhabditis elegans Intermediate fi... 28 5.5
U56860-4|AAM69100.1| 1128|Caenorhabditis elegans Intermediate fi... 28 5.5
U56860-3|AAM69101.1| 1248|Caenorhabditis elegans Intermediate fi... 28 5.5
AF077536-11|AAK31413.1| 217|Caenorhabditis elegans Hypothetical... 28 5.5
AF022973-2|AAC25800.2| 527|Caenorhabditis elegans Hypothetical ... 28 5.5
AF022973-1|AAT81194.1| 513|Caenorhabditis elegans Hypothetical ... 28 5.5
Z70307-11|CAA94337.1| 488|Caenorhabditis elegans Hypothetical p... 28 7.2
Z69788-8|CAA93644.3| 483|Caenorhabditis elegans Hypothetical pr... 28 7.2
U97000-10|AAC47997.1| 530|Caenorhabditis elegans Hypothetical p... 27 9.6
>Z19153-2|CAA79549.1| 493|Caenorhabditis elegans Hypothetical
protein C38C10.2 protein.
Length = 493
Score = 58.0 bits (134), Expect = 6e-09
Identities = 30/105 (28%), Positives = 57/105 (54%), Gaps = 1/105 (0%)
Frame = +3
Query: 309 IIPQ-RYILGVMGLMGVCNAYTMRVCLNLAITQMVNKTITNETHAIDPYACSSGDVTGNE 485
++P R+ L ++ G Y MR ++ A+ MVN+ T+ ++ + ++T E
Sbjct: 10 LVPSTRFALSLVMFFGCLVTYMMRTNMSFAVVCMVNENKTDT--GVEKVSRCGKEMTPVE 67
Query: 486 TEIPKPYAIFNWNETTQGLILGGFYFGYAATQVPGGYLAEKYRGK 620
+ F+W++ T G++L F++GY +Q+ GG+LA +Y GK
Sbjct: 68 SN-SSVIGEFDWDKQTTGMVLSSFFYGYIGSQIIGGHLASRYGGK 111
>U58737-2|AAM69081.1| 479|Caenorhabditis elegans Hypothetical
protein ZK54.1a protein.
Length = 479
Score = 58.0 bits (134), Expect = 6e-09
Identities = 33/114 (28%), Positives = 54/114 (47%)
Frame = +3
Query: 318 QRYILGVMGLMGVCNAYTMRVCLNLAITQMVNKTITNETHAIDPYACSSGDVTGNETEIP 497
+R+++ ++ L+G N Y MR L++AI +M + T V G +
Sbjct: 37 RRHVVAILALLGFANIYAMRANLSIAIVEMTSGT--------------ERKVNGTTLHVL 82
Query: 498 KPYAIFNWNETTQGLILGGFYFGYAATQVPGGYLAEKYRGKWTLGLGVVEHSAF 659
+ NW TQG++L F++GY +Q+PGGYLA + K G + F
Sbjct: 83 GDFE--NWTPMTQGVVLSSFFYGYIVSQLPGGYLAYTHGAKTIFFAGTFGTAVF 134
>U58737-1|ABC48238.1| 474|Caenorhabditis elegans Hypothetical
protein ZK54.1b protein.
Length = 474
Score = 58.0 bits (134), Expect = 6e-09
Identities = 33/114 (28%), Positives = 54/114 (47%)
Frame = +3
Query: 318 QRYILGVMGLMGVCNAYTMRVCLNLAITQMVNKTITNETHAIDPYACSSGDVTGNETEIP 497
+R+++ ++ L+G N Y MR L++AI +M + T V G +
Sbjct: 32 RRHVVAILALLGFANIYAMRANLSIAIVEMTSGT--------------ERKVNGTTLHVL 77
Query: 498 KPYAIFNWNETTQGLILGGFYFGYAATQVPGGYLAEKYRGKWTLGLGVVEHSAF 659
+ NW TQG++L F++GY +Q+PGGYLA + K G + F
Sbjct: 78 GDFE--NWTPMTQGVVLSSFFYGYIVSQLPGGYLAYTHGAKTIFFAGTFGTAVF 129
>Z83236-1|CAB05777.1| 445|Caenorhabditis elegans Hypothetical
protein K10H10.1 protein.
Length = 445
Score = 42.3 bits (95), Expect = 3e-04
Identities = 17/33 (51%), Positives = 23/33 (69%)
Frame = +3
Query: 513 FNWNETTQGLILGGFYFGYAATQVPGGYLAEKY 611
F WN+T G +L F++GYA TQV G +A+KY
Sbjct: 53 FAWNKTDSGTVLSCFFWGYALTQVFAGRIADKY 85
>Z48055-10|CAA88135.1| 573|Caenorhabditis elegans Hypothetical
protein K10G9.1 protein.
Length = 573
Score = 40.7 bits (91), Expect = 0.001
Identities = 16/44 (36%), Positives = 26/44 (59%)
Frame = +3
Query: 513 FNWNETTQGLILGGFYFGYAATQVPGGYLAEKYRGKWTLGLGVV 644
F W T G++ F++GYAA+Q+P G +A K+ LG++
Sbjct: 91 FFWTGTEVGMMESSFFYGYAASQIPAGVIAAKFAPNKLFMLGIL 134
>Z36282-3|CAA85289.1| 573|Caenorhabditis elegans Hypothetical
protein K10G9.1 protein.
Length = 573
Score = 40.7 bits (91), Expect = 0.001
Identities = 16/44 (36%), Positives = 26/44 (59%)
Frame = +3
Query: 513 FNWNETTQGLILGGFYFGYAATQVPGGYLAEKYRGKWTLGLGVV 644
F W T G++ F++GYAA+Q+P G +A K+ LG++
Sbjct: 91 FFWTGTEVGMMESSFFYGYAASQIPAGVIAAKFAPNKLFMLGIL 134
>Z48055-1|CAA88134.1| 544|Caenorhabditis elegans Hypothetical
protein T07A5.3 protein.
Length = 544
Score = 39.9 bits (89), Expect = 0.002
Identities = 18/55 (32%), Positives = 28/55 (50%)
Frame = +3
Query: 513 FNWNETTQGLILGGFYFGYAATQVPGGYLAEKYRGKWTLGLGVVEHSAFYISDTV 677
F W G++ F++GYAA+Q+P G LA K+ LG++ S I +
Sbjct: 91 FLWTGAEVGMMESSFFYGYAASQIPAGVLAAKFAPNKIFMLGILVASFMNILSAI 145
>Z22177-5|CAA80150.1| 576|Caenorhabditis elegans Hypothetical
protein ZK512.6 protein.
Length = 576
Score = 39.1 bits (87), Expect = 0.003
Identities = 14/43 (32%), Positives = 23/43 (53%)
Frame = +3
Query: 513 FNWNETTQGLILGGFYFGYAATQVPGGYLAEKYRGKWTLGLGV 641
FNW ++ +++GY TQ+P G+LA K+ G G+
Sbjct: 113 FNWTIDELSVMESSYFYGYLVTQIPAGFLAAKFPPNKLFGFGI 155
>AF095787-1|AAC64972.1| 563|Caenorhabditis elegans EAT-4 protein.
Length = 563
Score = 39.1 bits (87), Expect = 0.003
Identities = 14/43 (32%), Positives = 23/43 (53%)
Frame = +3
Query: 513 FNWNETTQGLILGGFYFGYAATQVPGGYLAEKYRGKWTLGLGV 641
FNW ++ +++GY TQ+P G+LA K+ G G+
Sbjct: 100 FNWTIDELSVMESSYFYGYLVTQIPAGFLAAKFPPNKLFGFGI 142
>Z47070-1|CAA87340.1| 516|Caenorhabditis elegans Hypothetical
protein T09B9.2 protein.
Length = 516
Score = 33.5 bits (73), Expect = 0.15
Identities = 16/39 (41%), Positives = 22/39 (56%)
Frame = +3
Query: 513 FNWNETTQGLILGGFYFGYAATQVPGGYLAEKYRGKWTL 629
F W+ QGLI G FG + V G+ A++ GKWT+
Sbjct: 77 FAWSSIQQGLIYSGQNFG-SLFMVITGWQADRLNGKWTI 114
>AL023845-4|CAA19541.1| 516|Caenorhabditis elegans Hypothetical
protein Y51B9A.6 protein.
Length = 516
Score = 31.9 bits (69), Expect = 0.44
Identities = 23/102 (22%), Positives = 40/102 (39%)
Frame = +3
Query: 306 CIIPQRYILGVMGLMGVCNAYTMRVCLNLAITQMVNKTITNETHAIDPYACSSGDVTGNE 485
C RYI+ V+GL + + +C N MVN + S ++ N+
Sbjct: 26 CRGANRYIILVIGLFFLSFLLSSIICYNACYVSMVNPQSSPYWEDFVNSNKSLDEINWND 85
Query: 486 TEIPKPYAIFNWNETTQGLILGGFYFGYAATQVPGGYLAEKY 611
++P F ++ T + L + G A VP L ++
Sbjct: 86 PDLPLSQRRFAFDTTQKSLGFAAGFLGAIAAVVPMSRLTARF 127
>U28735-4|AAF99953.1| 488|Caenorhabditis elegans Hypothetical
protein F48E3.2 protein.
Length = 488
Score = 30.7 bits (66), Expect = 1.0
Identities = 27/84 (32%), Positives = 39/84 (46%), Gaps = 1/84 (1%)
Frame = +3
Query: 390 LAITQMVNKTITNETHAIDPYACSSGDVTGNETEIPKPYAIFNWN-ETTQGLILGGFYFG 566
LAIT + TN A A S + NE+ +PY + N E +L ++ G
Sbjct: 15 LAITAIFQMGYTN---AYPNTAIGSFRIFLNESA-NEPYTLSNSEFEWAWSAMLAIYFIG 70
Query: 567 YAATQVPGGYLAEKYRGKWTLGLG 638
+AA V +A++ KWTL LG
Sbjct: 71 FAAGSVISAGVADRIGRKWTLFLG 94
>Z68760-4|CAE17822.1| 160|Caenorhabditis elegans Hypothetical
protein F36H1.9 protein.
Length = 160
Score = 28.3 bits (60), Expect = 5.5
Identities = 14/38 (36%), Positives = 19/38 (50%)
Frame = +1
Query: 187 WFD*LWKTKSPKYKLTSCLDRRMLQQQEKIIFSQSVYD 300
WF LW T KY + L R Q++I+ S+ V D
Sbjct: 122 WFTGLWATAITKYTWQNALLARNYSNQKRILKSEIVED 159
>U56860-5|AAP40524.1| 685|Caenorhabditis elegans Intermediate
filament, c protein2, isoform c protein.
Length = 685
Score = 28.3 bits (60), Expect = 5.5
Identities = 14/41 (34%), Positives = 23/41 (56%)
Frame = +3
Query: 201 MENEESQVQAHKLLGQKNVAATRKDNFLTKRLRSCCIIPQR 323
+EN++++V HK L + T ++ TKRLR P+R
Sbjct: 565 IENDQNEVHLHKFLDRDYRIKTYEEYSTTKRLRDRSQPPER 605
>U56860-4|AAM69100.1| 1128|Caenorhabditis elegans Intermediate
filament, c protein2, isoform a protein.
Length = 1128
Score = 28.3 bits (60), Expect = 5.5
Identities = 14/41 (34%), Positives = 23/41 (56%)
Frame = +3
Query: 201 MENEESQVQAHKLLGQKNVAATRKDNFLTKRLRSCCIIPQR 323
+EN++++V HK L + T ++ TKRLR P+R
Sbjct: 565 IENDQNEVHLHKFLDRDYRIKTYEEYSTTKRLRDRSQPPER 605
>U56860-3|AAM69101.1| 1248|Caenorhabditis elegans Intermediate
filament, c protein2, isoform b protein.
Length = 1248
Score = 28.3 bits (60), Expect = 5.5
Identities = 14/41 (34%), Positives = 23/41 (56%)
Frame = +3
Query: 201 MENEESQVQAHKLLGQKNVAATRKDNFLTKRLRSCCIIPQR 323
+EN++++V HK L + T ++ TKRLR P+R
Sbjct: 565 IENDQNEVHLHKFLDRDYRIKTYEEYSTTKRLRDRSQPPER 605
>AF077536-11|AAK31413.1| 217|Caenorhabditis elegans Hypothetical
protein C16A11.8 protein.
Length = 217
Score = 28.3 bits (60), Expect = 5.5
Identities = 17/50 (34%), Positives = 26/50 (52%)
Frame = -2
Query: 578 CRRISKVKST*N*ALRCFVPIKYGVRFWNLSFISSNVATGACVWIDGMRL 429
C R V ST C+ K+ VR + F +N+ GA +W+DG+R+
Sbjct: 83 CNREGSVLST----FACYDEQKHIVRHASKYFRRNNITQGA-IWLDGVRI 127
>AF022973-2|AAC25800.2| 527|Caenorhabditis elegans Hypothetical
protein F25G6.7a protein.
Length = 527
Score = 28.3 bits (60), Expect = 5.5
Identities = 15/54 (27%), Positives = 24/54 (44%)
Frame = +3
Query: 480 NETEIPKPYAIFNWNETTQGLILGGFYFGYAATQVPGGYLAEKYRGKWTLGLGV 641
NET + +W+ QG I F G GG +A+K+ K+ + + V
Sbjct: 90 NETYPENAAPLLDWSSDEQGYIFSAFNAGLLVMLFTGG-MADKFNAKYMILVSV 142
>AF022973-1|AAT81194.1| 513|Caenorhabditis elegans Hypothetical
protein F25G6.7b protein.
Length = 513
Score = 28.3 bits (60), Expect = 5.5
Identities = 15/54 (27%), Positives = 24/54 (44%)
Frame = +3
Query: 480 NETEIPKPYAIFNWNETTQGLILGGFYFGYAATQVPGGYLAEKYRGKWTLGLGV 641
NET + +W+ QG I F G GG +A+K+ K+ + + V
Sbjct: 76 NETYPENAAPLLDWSSDEQGYIFSAFNAGLLVMLFTGG-MADKFNAKYMILVSV 128
>Z70307-11|CAA94337.1| 488|Caenorhabditis elegans Hypothetical
protein C39E9.10 protein.
Length = 488
Score = 27.9 bits (59), Expect = 7.2
Identities = 12/43 (27%), Positives = 22/43 (51%)
Frame = +3
Query: 513 FNWNETTQGLILGGFYFGYAATQVPGGYLAEKYRGKWTLGLGV 641
+N +++ GLI F + GYL +++ KW + +GV
Sbjct: 39 YNISDSLGGLIQTVFLISFMVFSPVCGYLGDRFNRKWIMIIGV 81
>Z69788-8|CAA93644.3| 483|Caenorhabditis elegans Hypothetical
protein F09A5.1 protein.
Length = 483
Score = 27.9 bits (59), Expect = 7.2
Identities = 12/51 (23%), Positives = 26/51 (50%)
Frame = +3
Query: 492 IPKPYAIFNWNETTQGLILGGFYFGYAATQVPGGYLAEKYRGKWTLGLGVV 644
+P + +N N++ G+I F + GYL +++ K+ + +G+V
Sbjct: 32 LPDVQSYYNINDSMGGMIQTVFLISFMIGSPICGYLGDRFNRKYVMLVGIV 82
>U97000-10|AAC47997.1| 530|Caenorhabditis elegans Hypothetical
protein F21F8.11 protein.
Length = 530
Score = 27.5 bits (58), Expect = 9.6
Identities = 13/55 (23%), Positives = 26/55 (47%), Gaps = 1/55 (1%)
Frame = +3
Query: 483 ETEIPKPYA-IFNWNETTQGLILGGFYFGYAATQVPGGYLAEKYRGKWTLGLGVV 644
E ++ K Y F W+ + QG I+ + G P G L +++ + L + ++
Sbjct: 104 EGKVIKDYGGTFIWSVSWQGYIVSAAFLGGFIFSYPAGVLVDRFSARHILSVAIL 158
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,852,288
Number of Sequences: 27780
Number of extensions: 390301
Number of successful extensions: 949
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 901
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 949
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1581836700
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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