Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-0999
(690 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At4g00370.1 68417.m00051 sugar transporter family protein contai... 52 3e-07
At5g44370.1 68418.m05433 transporter-related similar to vesicula... 43 5e-07
At2g29650.3 68415.m03602 inorganic phosphate transporter, putati... 48 4e-06
At2g29650.2 68415.m03604 inorganic phosphate transporter, putati... 48 4e-06
At2g29650.1 68415.m03603 inorganic phosphate transporter, putati... 48 4e-06
At5g20380.1 68418.m02424 transporter-related low similarity to v... 47 1e-05
At3g46980.2 68416.m05102 transporter-related low similarity to b... 37 0.014
At3g46980.1 68416.m05101 transporter-related low similarity to b... 37 0.014
At2g38060.1 68415.m04672 transporter-related low similarity to v... 36 0.033
At4g07520.1 68417.m01174 hypothetical protein contains Pfam prof... 29 2.9
At1g50270.1 68414.m05636 pentatricopeptide (PPR) repeat-containi... 29 3.8
At1g16260.1 68414.m01947 protein kinase family protein contains ... 27 8.9
>At4g00370.1 68417.m00051 sugar transporter family protein contains
Pfam profile PF00083: major facilitator superfamily
protein
Length = 541
Score = 52.4 bits (120), Expect = 3e-07
Identities = 22/44 (50%), Positives = 29/44 (65%)
Frame = +3
Query: 513 FNWNETTQGLILGGFYFGYAATQVPGGYLAEKYRGKWTLGLGVV 644
+NW+ T GLI F++GY TQ+ GG A+K+ GK LG GVV
Sbjct: 163 YNWSSATVGLIQSSFFWGYLLTQILGGIWADKFGGKVVLGFGVV 206
>At5g44370.1 68418.m05433 transporter-related similar to vesicular
glutamate transporter 2 [Mus musculus] GI:15811369,
Na-dependent inorganic phosphate cotransporter [Homo
sapiens] GI:7328923; contains Pfam profile PF00083:
major facilitator superfamily protein
Length = 432
Score = 43.2 bits (97), Expect(2) = 5e-07
Identities = 19/41 (46%), Positives = 28/41 (68%)
Frame = +3
Query: 522 NETTQGLILGGFYFGYAATQVPGGYLAEKYRGKWTLGLGVV 644
N++++G IL F+ GYA +QVPGG+ A+K G+ L L V
Sbjct: 44 NQSSKGTILSTFFVGYACSQVPGGWAAQKIGGRKVLLLSFV 84
Score = 27.9 bits (59), Expect(2) = 5e-07
Identities = 12/41 (29%), Positives = 21/41 (51%)
Frame = +3
Query: 312 IPQRYILGVMGLMGVCNAYTMRVCLNLAITQMVNKTITNET 434
IPQRY++ + + C Y RV ++A T + N++
Sbjct: 6 IPQRYVIVFLTFLSTCVCYIERVGFSIAYTVAADAAGINQS 46
>At2g29650.3 68415.m03602 inorganic phosphate transporter, putative
similar to brain specific Na+-dependent inorganic
phosphate cotransporter [Rattus norvegicus] GI:507415;
contains Pfam profile PF00083: major facilitator
superfamily protein
Length = 400
Score = 48.4 bits (110), Expect = 4e-06
Identities = 21/46 (45%), Positives = 27/46 (58%)
Frame = +3
Query: 507 AIFNWNETTQGLILGGFYFGYAATQVPGGYLAEKYRGKWTLGLGVV 644
A + WN T GLI F++GY TQ+ GG A+ GK LG GV+
Sbjct: 20 AEYGWNPATVGLIQSSFFWGYLLTQIAGGIWADTVGGKRVLGFGVI 65
>At2g29650.2 68415.m03604 inorganic phosphate transporter, putative
similar to brain specific Na+-dependent inorganic
phosphate cotransporter [Rattus norvegicus] GI:507415;
contains Pfam profile PF00083: major facilitator
superfamily protein
Length = 398
Score = 48.4 bits (110), Expect = 4e-06
Identities = 21/46 (45%), Positives = 27/46 (58%)
Frame = +3
Query: 507 AIFNWNETTQGLILGGFYFGYAATQVPGGYLAEKYRGKWTLGLGVV 644
A + WN T GLI F++GY TQ+ GG A+ GK LG GV+
Sbjct: 132 AEYGWNPATVGLIQSSFFWGYLLTQIAGGIWADTVGGKRVLGFGVI 177
>At2g29650.1 68415.m03603 inorganic phosphate transporter, putative
similar to brain specific Na+-dependent inorganic
phosphate cotransporter [Rattus norvegicus] GI:507415;
contains Pfam profile PF00083: major facilitator
superfamily protein
Length = 512
Score = 48.4 bits (110), Expect = 4e-06
Identities = 21/46 (45%), Positives = 27/46 (58%)
Frame = +3
Query: 507 AIFNWNETTQGLILGGFYFGYAATQVPGGYLAEKYRGKWTLGLGVV 644
A + WN T GLI F++GY TQ+ GG A+ GK LG GV+
Sbjct: 132 AEYGWNPATVGLIQSSFFWGYLLTQIAGGIWADTVGGKRVLGFGVI 177
>At5g20380.1 68418.m02424 transporter-related low similarity to
vesicular glutamate transporter 3 [Rattus norvegicus]
GI:21685382
Length = 517
Score = 47.2 bits (107), Expect = 1e-05
Identities = 21/62 (33%), Positives = 37/62 (59%)
Frame = +3
Query: 456 CSSGDVTGNETEIPKPYAIFNWNETTQGLILGGFYFGYAATQVPGGYLAEKYRGKWTLGL 635
C+ V + IP + F W+ + GL+ F++GYA +Q+PGG+L++ + G+ L +
Sbjct: 112 CNMDKVNLSIAIIPMSHQ-FGWSSSVAGLVQSSFFWGYALSQLPGGWLSKIFGGRKVLEI 170
Query: 636 GV 641
GV
Sbjct: 171 GV 172
>At3g46980.2 68416.m05102 transporter-related low similarity to
brain specific Na+-dependent inorganic phosphate
cotransporter from [Rattus norvegicus] GI:507415, [Homo
sapiens] GI:7328925, vesicular glutamate transporter 3
from [Rattus norvegicus] GI:21685382; contains Pfam
profile PF00083: major facilitator superfamily protein
Length = 469
Score = 36.7 bits (81), Expect = 0.014
Identities = 13/41 (31%), Positives = 24/41 (58%)
Frame = +3
Query: 519 WNETTQGLILGGFYFGYAATQVPGGYLAEKYRGKWTLGLGV 641
W+++ G++ F +GY + + GG L ++Y GK + GV
Sbjct: 145 WSKSFSGIVQSSFLWGYLISPIAGGTLVDRYGGKVVMAWGV 185
>At3g46980.1 68416.m05101 transporter-related low similarity to
brain specific Na+-dependent inorganic phosphate
cotransporter from [Rattus norvegicus] GI:507415, [Homo
sapiens] GI:7328925, vesicular glutamate transporter 3
from [Rattus norvegicus] GI:21685382; contains Pfam
profile PF00083: major facilitator superfamily protein
Length = 533
Score = 36.7 bits (81), Expect = 0.014
Identities = 13/41 (31%), Positives = 24/41 (58%)
Frame = +3
Query: 519 WNETTQGLILGGFYFGYAATQVPGGYLAEKYRGKWTLGLGV 641
W+++ G++ F +GY + + GG L ++Y GK + GV
Sbjct: 145 WSKSFSGIVQSSFLWGYLISPIAGGTLVDRYGGKVVMAWGV 185
>At2g38060.1 68415.m04672 transporter-related low similarity to
vesicular glutamate transporter 3 [Homo sapiens]
GI:21213895, brain specific Na+-dependent inorganic
phosphate cotransporter [Rattus norvegicus] GI:507415;
contains Pfam profile PF00083: major facilitator
superfamily protein
Length = 512
Score = 35.5 bits (78), Expect = 0.033
Identities = 15/41 (36%), Positives = 23/41 (56%)
Frame = +3
Query: 519 WNETTQGLILGGFYFGYAATQVPGGYLAEKYRGKWTLGLGV 641
W+ + G++ F +GY + V GG L ++Y GK L GV
Sbjct: 132 WSSSFLGVVQSSFLWGYIFSSVIGGALVDRYGGKRVLAWGV 172
>At4g07520.1 68417.m01174 hypothetical protein contains Pfam profile
PF03384: Drosophila protein of unknown function, DUF287
Length = 734
Score = 29.1 bits (62), Expect = 2.9
Identities = 17/45 (37%), Positives = 23/45 (51%), Gaps = 2/45 (4%)
Frame = +3
Query: 426 NETHAIDPYACSSGDV--TGNETEIPKPYAIFNWNETTQGLILGG 554
NETH ++P A + DV NET +P A+ T G+ GG
Sbjct: 561 NETHDVEPEANETHDVEPEANETHDVEPEAVETDGVETDGVETGG 605
>At1g50270.1 68414.m05636 pentatricopeptide (PPR) repeat-containing
protein contains INTERPRO:IPR002885 PPR repeats
Length = 596
Score = 28.7 bits (61), Expect = 3.8
Identities = 13/28 (46%), Positives = 17/28 (60%)
Frame = +3
Query: 225 QAHKLLGQKNVAATRKDNFLTKRLRSCC 308
Q H LL + TR+D FL++ LR CC
Sbjct: 19 QIHCLLLTSPIFYTRRDLFLSRLLRRCC 46
>At1g16260.1 68414.m01947 protein kinase family protein contains
Pfam domain, PF00069: Protein kinase domain
Length = 720
Score = 27.5 bits (58), Expect = 8.9
Identities = 11/33 (33%), Positives = 18/33 (54%)
Frame = -3
Query: 550 PKIKPCVVSFQLNMAYGFGISVSFPVTSPLEHA 452
P+I+ V SF L + + F + SPL+H+
Sbjct: 75 PRIRRAVTSFNLGDPFSISVYNKFYIQSPLKHS 107
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,742,069
Number of Sequences: 28952
Number of extensions: 354615
Number of successful extensions: 871
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 837
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 870
length of database: 12,070,560
effective HSP length: 79
effective length of database: 9,783,352
effective search space used: 1467502800
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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