Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-0997
(451 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC12D12.04c |pck2|sts6, pkc1|protein kinase C |Schizosaccharom... 76 2e-15
SPCC24B10.07 |gad8||serine/threonine protein kinase Gad8 |Schizo... 62 5e-11
SPAC1B9.02c |sck1||serine/threonine protein kinase Sck1|Schizosa... 56 2e-09
SPAC17G8.14c |pck1|SPAC22H10.01c|protein kinase C |Schizosacchar... 56 3e-09
SPCC4G3.08 |psk1||serine/threonine protein kinase Psk1|Schizosac... 55 4e-09
SPAC22E12.14c |sck2||serine/threonine protein kinase Sck2|Schizo... 54 1e-08
SPAC821.12 |orb6||serine/threonine protein kinase Orb6|Schizosac... 52 5e-08
SPCC417.06c |ppk35|mug27|serine/threonine protein kinase Ppk35|S... 44 1e-05
SPAPB18E9.02c |ppk18||serine/threonine protein kinase Ppk18 |Sch... 43 2e-05
SPCC1450.11c |cek1||serine/threonine protein kinase Cek1|Schizos... 40 1e-04
SPBC725.06c |ppk31|mug25|serine/threonine protein kinase Ppk31 |... 38 5e-04
SPAC4G8.05 |ppk14||serine/threonine protein kinase Ppk14 |Schizo... 35 0.007
SPBC106.10 |pka1|tpk, git6|cAMP-dependent protein kinase catalyt... 33 0.027
SPBC1861.09 |ppk22||serine/threonine protein kinase Ppk22 |Schiz... 33 0.027
SPBP16F5.03c |||phosphatidylinositol kinase |Schizosaccharomyces... 29 0.44
SPAC25G10.03 |zip1||transcription factor Zip1|Schizosaccharomyce... 27 1.8
SPAC6G9.14 |||RNA-binding protein|Schizosaccharomyces pombe|chr ... 27 1.8
SPBC19G7.01c |msh2|swi8, mut3, SPBC24C6.12c|MutS protein homolog... 26 2.3
SPCC23B6.04c |||sec14 cytosolic factor family|Schizosaccharomyce... 26 3.1
SPAC3H5.09c |||conserved fungal protein|Schizosaccharomyces pomb... 25 4.1
SPBC1347.05c |||DNAJ domain protein Scj1|Schizosaccharomyces pom... 25 4.1
SPAC2F3.02 |||ER protein translocation subcomplex subunit|Schizo... 25 4.1
SPBC947.01 |||AAA family ATPase, unknown biological role|Schizos... 25 4.1
SPAC343.09 |ubx3|mug39|UBX domain protein Ubx3|Schizosaccharomyc... 25 4.1
SPBC26H8.10 |dis3|rrp44|3'-5' exoribonuclease subunit Dis3 |Schi... 25 7.1
SPCC24B10.15 |||PINc domain|Schizosaccharomyces pombe|chr 3|||Ma... 24 9.4
SPAC1486.05 |nup189||nucleoporin Nup189|Schizosaccharomyces pomb... 24 9.4
SPBC21D10.06c |map4||cell agglutination protein Map4|Schizosacch... 24 9.4
SPAC637.11 |suv3||ATP-dependent RNA helicase Suv3|Schizosaccharo... 24 9.4
SPBC16E9.02c |||CUE domain protein Cue5 |Schizosaccharomyces pom... 24 9.4
>SPBC12D12.04c |pck2|sts6, pkc1|protein kinase C |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 1016
Score = 76.2 bits (179), Expect = 2e-15
Identities = 33/84 (39%), Positives = 49/84 (58%), Gaps = 2/84 (2%)
Frame = +2
Query: 2 KDPRRRLGGGEGDAEELKRHSFFQNLNWDAVARREVPAPFVPQLSHAADTCNFADEFTRM 181
+DP++RLG G DAE++ H FF N+NWD + + P++P L+ DT F +EFTR
Sbjct: 920 RDPKKRLGSGPNDAEDVMTHPFFSNINWDDIYHKRTQPPYIPSLNSPTDTKYFDEEFTRE 979
Query: 182 PPTDSPAQA--PKHSDKLFMGYSY 247
P +P + K + F G+SY
Sbjct: 980 LPVLTPVNSILTKEMQQHFEGFSY 1003
>SPCC24B10.07 |gad8||serine/threonine protein kinase Gad8
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 569
Score = 61.7 bits (143), Expect = 5e-11
Identities = 32/96 (33%), Positives = 51/96 (53%), Gaps = 3/96 (3%)
Frame = +2
Query: 8 PRRRLGGGEGDAEELKRHSFFQNLNWDAVARREVPAPFVPQLSHAADTCNFADEFTRMPP 187
P +RLG G A+E+K H FF +++W + +++ PF P + A DT NF EFT P
Sbjct: 467 PEKRLGSG--GAQEIKNHPFFDDIDWKKLCAKKIQPPFKPSVESAIDTSNFDSEFTSEIP 524
Query: 188 TDSPAQAPKHSDKL---FMGYSYVAPSILVSENIIS 286
DS S+ + F +SY P+ + + + I+
Sbjct: 525 MDSVVADSHLSETVQQRFANWSYQRPTTIDTSDDIN 560
>SPAC1B9.02c |sck1||serine/threonine protein kinase
Sck1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 696
Score = 56.4 bits (130), Expect = 2e-09
Identities = 24/58 (41%), Positives = 35/58 (60%)
Frame = +2
Query: 2 KDPRRRLGGGEGDAEELKRHSFFQNLNWDAVARREVPAPFVPQLSHAADTCNFADEFT 175
++P RLG D ELK H FF ++NWD +++++V PF P + + D NF EFT
Sbjct: 542 RNPNHRLGA-VADTTELKEHPFFADINWDLLSKKKVQPPFKPNVQNDLDVSNFDKEFT 598
>SPAC17G8.14c |pck1|SPAC22H10.01c|protein kinase C
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 988
Score = 56.0 bits (129), Expect = 3e-09
Identities = 28/86 (32%), Positives = 43/86 (50%), Gaps = 2/86 (2%)
Frame = +2
Query: 2 KDPRRRLGGGEGDAEELKRHSFFQNLNWDAVARREVPAPFVPQLSHAADTCNFADEFTRM 181
+DP +RLG G DA E+ H FF ++ WD + + + P ++ D NF +EFT
Sbjct: 901 RDPNQRLGSGPKDANEVMAHPFFASIVWDDLYNKLYEPSYKPLINDPRDLNNFDEEFTSA 960
Query: 182 PPTDSPAQA--PKHSDKLFMGYSYVA 253
PT +P + + F G+S A
Sbjct: 961 CPTLTPVNTVLTRQQQECFRGFSSFA 986
>SPCC4G3.08 |psk1||serine/threonine protein kinase
Psk1|Schizosaccharomyces pombe|chr 3|||Manual
Length = 436
Score = 55.2 bits (127), Expect = 4e-09
Identities = 30/108 (27%), Positives = 61/108 (56%), Gaps = 10/108 (9%)
Frame = +2
Query: 2 KDPRRRLG--GGEGDAEELKRHSFFQNLNWDAVARREVPAPFVPQLSHAADTCNFADEFT 175
K+P++RLG G E + +K+H ++ ++W+ + +R +P P VP +++ NF+ EFT
Sbjct: 326 KNPKQRLGADGPEKGYDAIKKHRIYRRIDWNKLEKRMLPPPIVPCITNPEAAENFSVEFT 385
Query: 176 RMPPTDSPAQAPKHSD-------KLFMGYSYVA-PSILVSENIISDQI 295
++P + +P + + F G++YVA P+ L E + ++ +
Sbjct: 386 KLPLSTTPILHEEFGNLTIGSHSSAFQGFTYVASPNFLNCEFLSNNAV 433
>SPAC22E12.14c |sck2||serine/threonine protein kinase
Sck2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 646
Score = 53.6 bits (123), Expect = 1e-08
Identities = 23/58 (39%), Positives = 34/58 (58%)
Frame = +2
Query: 2 KDPRRRLGGGEGDAEELKRHSFFQNLNWDAVARREVPAPFVPQLSHAADTCNFADEFT 175
++P+ RLG GD EE+ +H FF ++W +A +E+ PF P + D NF EFT
Sbjct: 506 RNPKHRLGA-HGDVEEVMKHPFFDGIDWKKLAAKEISPPFKPIVEGEIDVSNFDVEFT 562
>SPAC821.12 |orb6||serine/threonine protein kinase
Orb6|Schizosaccharomyces pombe|chr 1|||Manual
Length = 469
Score = 51.6 bits (118), Expect = 5e-08
Identities = 33/89 (37%), Positives = 46/89 (51%), Gaps = 8/89 (8%)
Frame = +2
Query: 5 DPRRRLGGGEGDAEELKRHSFFQNLNWDAVARREVPAPFVPQLSHAADTCNF-ADEFTRM 181
D RLG G A E+ +H FF ++WD + RE APF+P L DT F DE ++
Sbjct: 373 DSEHRLG--RGGAIEIMQHPFFTGIDWDHI--RETAAPFIPNLKSITDTHYFPVDELEQV 428
Query: 182 PP---TDSPA----QAPKHSDKLFMGYSY 247
P T PA Q + ++ F+GY+Y
Sbjct: 429 PEQPVTQQPASVDPQTLEQTNLAFLGYTY 457
Score = 24.2 bits (50), Expect = 9.4
Identities = 11/34 (32%), Positives = 14/34 (41%)
Frame = +2
Query: 245 YVAPSILVSENIISDQIWMQATGQKTEKLKGWTP 346
Y+AP I + + D W E L GW P
Sbjct: 298 YIAPEIFLQQGYGQDCDWWSLGAIMFECLIGWPP 331
>SPCC417.06c |ppk35|mug27|serine/threonine protein kinase
Ppk35|Schizosaccharomyces pombe|chr 3|||Manual
Length = 624
Score = 44.0 bits (99), Expect = 1e-05
Identities = 18/40 (45%), Positives = 28/40 (70%)
Frame = +2
Query: 47 ELKRHSFFQNLNWDAVARREVPAPFVPQLSHAADTCNFAD 166
E+++H FF+ L+W+ + +R VP PFVP+L + DT F D
Sbjct: 458 EIQKHPFFKRLHWNGLRKRAVP-PFVPRLENQLDTSYFDD 496
>SPAPB18E9.02c |ppk18||serine/threonine protein kinase Ppk18
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1316
Score = 43.2 bits (97), Expect = 2e-05
Identities = 22/52 (42%), Positives = 27/52 (51%)
Frame = +2
Query: 5 DPRRRLGGGEGDAEELKRHSFFQNLNWDAVARREVPAPFVPQLSHAADTCNF 160
+P RRLG D E+K H FF +NWD + E APF+P DT F
Sbjct: 913 NPERRLGFS--DINEIKEHPFFNGINWDDIFSHE--APFIPAPETPLDTAYF 960
>SPCC1450.11c |cek1||serine/threonine protein kinase
Cek1|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1338
Score = 40.3 bits (90), Expect = 1e-04
Identities = 21/52 (40%), Positives = 28/52 (53%)
Frame = +2
Query: 5 DPRRRLGGGEGDAEELKRHSFFQNLNWDAVARREVPAPFVPQLSHAADTCNF 160
+P RLG EE+K H FF+++NWD + E PFVP+ DT F
Sbjct: 939 NPANRLGAN--GVEEIKAHPFFKSVNWDTIL--EEDPPFVPKPFSPEDTVYF 986
>SPBC725.06c |ppk31|mug25|serine/threonine protein kinase Ppk31
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1032
Score = 38.3 bits (85), Expect = 5e-04
Identities = 19/52 (36%), Positives = 27/52 (51%)
Frame = +2
Query: 5 DPRRRLGGGEGDAEELKRHSFFQNLNWDAVARREVPAPFVPQLSHAADTCNF 160
D +RLG +E+K+H FF+ + WD + P PFVPQ + D F
Sbjct: 858 DCNKRLGSN--GYQEIKKHPFFRTIKWDNL--NSGPGPFVPQTENVEDLTYF 905
>SPAC4G8.05 |ppk14||serine/threonine protein kinase Ppk14
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 566
Score = 34.7 bits (76), Expect = 0.007
Identities = 19/45 (42%), Positives = 27/45 (60%)
Frame = +2
Query: 2 KDPRRRLGGGEGDAEELKRHSFFQNLNWDAVARREVPAPFVPQLS 136
KD RLG G A ++K H FF+N+ W A+ R P P +P+L+
Sbjct: 464 KDENDRLGSQAG-AADVKLHPFFKNVQW-ALLRHTEP-PIIPKLA 505
>SPBC106.10 |pka1|tpk, git6|cAMP-dependent protein kinase catalytic
subunit Pka1 |Schizosaccharomyces pombe|chr 2|||Manual
Length = 512
Score = 32.7 bits (71), Expect = 0.027
Identities = 11/44 (25%), Positives = 26/44 (59%)
Frame = +2
Query: 2 KDPRRRLGGGEGDAEELKRHSFFQNLNWDAVARREVPAPFVPQL 133
+D R G + + ++ H +F++++WD + R++ P+VP +
Sbjct: 434 RDITCRYGNLKDGSMDIIMHPWFRDISWDKILTRKIEVPYVPPI 477
>SPBC1861.09 |ppk22||serine/threonine protein kinase Ppk22
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 526
Score = 32.7 bits (71), Expect = 0.027
Identities = 15/55 (27%), Positives = 29/55 (52%)
Frame = +2
Query: 2 KDPRRRLGGGEGDAEELKRHSFFQNLNWDAVARREVPAPFVPQLSHAADTCNFAD 166
KD +R G G A ++K+H FF+++ W + R + P +P++ + +D
Sbjct: 424 KDESKRCGSVAG-ASDIKQHPFFRHIQWALL--RSMKPPIIPKIEDGMEAVEPSD 475
>SPBP16F5.03c |||phosphatidylinositol kinase |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 3699
Score = 28.7 bits (61), Expect = 0.44
Identities = 15/32 (46%), Positives = 22/32 (68%)
Frame = -1
Query: 160 EVARVSRVRQLGHERRWYLTSRHSIPIQILEK 65
E+ RV R+ LG +RRW+L S+ +Q+LEK
Sbjct: 2233 EIIRV-RMASLGDQRRWFL----SVVVQLLEK 2259
>SPAC25G10.03 |zip1||transcription factor Zip1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 330
Score = 26.6 bits (56), Expect = 1.8
Identities = 14/48 (29%), Positives = 24/48 (50%)
Frame = -3
Query: 185 EASA*THPRSCTCQPRATIGARTALVPHVSPQHPNSNSGKRSASSVLR 42
+ +A T+P S P + +L + Q PN+NS + A+S +R
Sbjct: 216 DQNAFTNPLSTFASPDLASVSSPSLSSYKGAQSPNANSKRTKATSAIR 263
>SPAC6G9.14 |||RNA-binding protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 681
Score = 26.6 bits (56), Expect = 1.8
Identities = 15/43 (34%), Positives = 21/43 (48%), Gaps = 3/43 (6%)
Frame = -3
Query: 152 TCQPRATIGARTALVPHVSPQHP---NSNSGKRSASSVLRRHP 33
T A++ R LV + P P N+ G+R S + RRHP
Sbjct: 618 TALDNASVKQRAELVERIKPLIPSIKNTPCGRRILSKLERRHP 660
>SPBC19G7.01c |msh2|swi8, mut3, SPBC24C6.12c|MutS protein homolog
2|Schizosaccharomyces pombe|chr 2|||Manual
Length = 982
Score = 26.2 bits (55), Expect = 2.3
Identities = 19/65 (29%), Positives = 30/65 (46%), Gaps = 2/65 (3%)
Frame = +2
Query: 182 PPTDSPAQAPKHSDKL--FMGYSYVAPSILVSENIISDQIWMQATGQKTEKLKGWTPKDS 355
PP ++ Q H D + F S VA V NI+ I + GQ + L + +D+
Sbjct: 607 PPLEAIGQVIAHLDVILSFAHASTVAVIPYVRPNIVDSSIAQEKHGQSSNILDIVSLEDT 666
Query: 356 PFFQK 370
P F++
Sbjct: 667 PNFEE 671
>SPCC23B6.04c |||sec14 cytosolic factor family|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 1008
Score = 25.8 bits (54), Expect = 3.1
Identities = 15/54 (27%), Positives = 25/54 (46%)
Frame = +2
Query: 98 RREVPAPFVPQLSHAADTCNFADEFTRMPPTDSPAQAPKHSDKLFMGYSYVAPS 259
R+ +P P+++ + + +D P P+ PK + KL G S APS
Sbjct: 422 RKPLPTTTSPKVNPEPHSESISDTRPSTPRKVPPSTVPKMNPKLQGGNSVTAPS 475
>SPAC3H5.09c |||conserved fungal protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 2685
Score = 25.4 bits (53), Expect = 4.1
Identities = 11/21 (52%), Positives = 13/21 (61%), Gaps = 3/21 (14%)
Frame = +2
Query: 146 DTCNFADEFTR---MPPTDSP 199
DTC F DEFT MP ++P
Sbjct: 1720 DTCRFGDEFTHRCLMPSRENP 1740
>SPBC1347.05c |||DNAJ domain protein Scj1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 381
Score = 25.4 bits (53), Expect = 4.1
Identities = 9/24 (37%), Positives = 15/24 (62%)
Frame = +2
Query: 335 GWTPKDSPFFQKYAVDLSVPLLGD 406
GWT KD+ ++K + + LLG+
Sbjct: 271 GWTRKDNDLYRKETISVREALLGN 294
>SPAC2F3.02 |||ER protein translocation subcomplex
subunit|Schizosaccharomyces pombe|chr 1|||Manual
Length = 192
Score = 25.4 bits (53), Expect = 4.1
Identities = 9/15 (60%), Positives = 10/15 (66%)
Frame = -3
Query: 221 RCVWEPGLANRWEAS 177
RC WEP + R EAS
Sbjct: 95 RCTWEPSILTREEAS 109
>SPBC947.01 |||AAA family ATPase, unknown biological
role|Schizosaccharomyces pombe|chr 2|||Manual
Length = 660
Score = 25.4 bits (53), Expect = 4.1
Identities = 23/82 (28%), Positives = 37/82 (45%)
Frame = +2
Query: 101 REVPAPFVPQLSHAADTCNFADEFTRMPPTDSPAQAPKHSDKLFMGYSYVAPSILVSENI 280
R+ P+P+ P L+ + DT + + SPA +P P+ S+ I
Sbjct: 291 RKHPSPYKPYLNSSHDTLGSSTRPSSADTAGSPATSP--------------PATADSKTI 336
Query: 281 ISDQIWMQATGQKTEKLKGWTP 346
+S I +T Q+TE L+ TP
Sbjct: 337 VSKTI-SASTTQQTEPLQQTTP 357
>SPAC343.09 |ubx3|mug39|UBX domain protein Ubx3|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 410
Score = 25.4 bits (53), Expect = 4.1
Identities = 11/27 (40%), Positives = 16/27 (59%)
Frame = -2
Query: 411 EPSPSRGTLKSTAYFWKNGESLGVHPL 331
E P + L+ T YFW+NG S+ P+
Sbjct: 205 ESQPEK-PLRRTLYFWRNGFSVDDGPI 230
>SPBC26H8.10 |dis3|rrp44|3'-5' exoribonuclease subunit Dis3
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 970
Score = 24.6 bits (51), Expect = 7.1
Identities = 9/21 (42%), Positives = 14/21 (66%)
Frame = +3
Query: 90 LWRDVRYQRRSCPNCRTRLTR 152
L D+ Q R+CP CR++L +
Sbjct: 39 LRNDIPCQSRACPLCRSKLPK 59
>SPCC24B10.15 |||PINc domain|Schizosaccharomyces pombe|chr
3|||Manual
Length = 462
Score = 24.2 bits (50), Expect = 9.4
Identities = 11/32 (34%), Positives = 19/32 (59%)
Frame = +2
Query: 14 RRLGGGEGDAEELKRHSFFQNLNWDAVARREV 109
R +G G + EEL+ + F + W ++RRE+
Sbjct: 401 RGIGIGPKNQEELQTYVTFWSNIWTLLSRREI 432
>SPAC1486.05 |nup189||nucleoporin Nup189|Schizosaccharomyces pombe|chr
1|||Manual
Length = 1778
Score = 24.2 bits (50), Expect = 9.4
Identities = 11/38 (28%), Positives = 18/38 (47%)
Frame = +2
Query: 131 LSHAADTCNFADEFTRMPPTDSPAQAPKHSDKLFMGYS 244
LS A C+F+D + + HSD+L + Y+
Sbjct: 1523 LSKARSLCDFSDRVVDINMAEDLKPISVHSDQLTLAYA 1560
>SPBC21D10.06c |map4||cell agglutination protein
Map4|Schizosaccharomyces pombe|chr 2|||Manual
Length = 948
Score = 24.2 bits (50), Expect = 9.4
Identities = 17/61 (27%), Positives = 33/61 (54%)
Frame = -2
Query: 267 TNILGATYEYPMNSLSLCLGAWAGESVGGIRVNSSAKLHVSAACDNWGTNGAGTSRLATA 88
T I+ ++++Y +SLS + +S NSSA H+S++ + G++ A +S +
Sbjct: 538 TTIVSSSFQY--SSLSSNVTTTNAQSSSLSSSNSSALTHISSSIVSSGSSSALSSSTIVS 595
Query: 87 S 85
S
Sbjct: 596 S 596
>SPAC637.11 |suv3||ATP-dependent RNA helicase
Suv3|Schizosaccharomyces pombe|chr 1|||Manual
Length = 647
Score = 24.2 bits (50), Expect = 9.4
Identities = 8/21 (38%), Positives = 15/21 (71%)
Frame = -1
Query: 118 RRWYLTSRHSIPIQILEKGVP 56
+R + S+P++ILE+G+P
Sbjct: 572 KRLQIYDLKSVPLEILERGIP 592
>SPBC16E9.02c |||CUE domain protein Cue5 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 569
Score = 24.2 bits (50), Expect = 9.4
Identities = 9/29 (31%), Positives = 17/29 (58%)
Frame = +3
Query: 291 RYGCRRPDRKPRSSKDGRPRIPRSSKSTP 377
RY RP+R+ +++ D R P++ + P
Sbjct: 102 RYNSHRPERRRKTNNDRRNYPPQNRTAKP 130
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,053,912
Number of Sequences: 5004
Number of extensions: 44242
Number of successful extensions: 168
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 158
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 166
length of database: 2,362,478
effective HSP length: 67
effective length of database: 2,027,210
effective search space used: 166231220
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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