Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-0990
         (763 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ439060-3|CAD27754.1| 1645|Anopheles gambiae hypothetical prote...    26   1.5  
AJ438610-11|CAD27483.1|  765|Anopheles gambiae hypothetical prot...    26   1.5  
AB090814-2|BAC57904.1| 1049|Anopheles gambiae reverse transcript...    25   2.5  
AF532982-1|AAQ10289.1|  459|Anopheles gambiae putative RNA methy...    24   4.5  
AY578810-1|AAT07315.1|  897|Anopheles gambiae smurf protein.           24   5.9  
AF291654-1|AAG00600.1| 1340|Anopheles gambiae thioester-containi...    24   5.9  

>AJ439060-3|CAD27754.1| 1645|Anopheles gambiae hypothetical protein
           protein.
          Length = 1645

 Score = 25.8 bits (54), Expect = 1.5
 Identities = 18/68 (26%), Positives = 32/68 (47%), Gaps = 1/68 (1%)
 Frame = +2

Query: 221 IRKAQEAGVGWVAARRSNHYGMAGYWALKAEK-QGLIGLSFTNSSPILVPTRSKTSALGT 397
           IR+ +   +G     R   +  +G W+  +E  +  IG   T ++     + S TS   +
Sbjct: 471 IRRQRRTALG----NRDEPHSSSGNWSASSESGRTSIGSEITTTNTHPKSSASSTSLNHS 526

Query: 398 NPIALAAP 421
           NPI+ +AP
Sbjct: 527 NPISSSAP 534


>AJ438610-11|CAD27483.1|  765|Anopheles gambiae hypothetical protein
           protein.
          Length = 765

 Score = 25.8 bits (54), Expect = 1.5
 Identities = 18/68 (26%), Positives = 32/68 (47%), Gaps = 1/68 (1%)
 Frame = +2

Query: 221 IRKAQEAGVGWVAARRSNHYGMAGYWALKAEK-QGLIGLSFTNSSPILVPTRSKTSALGT 397
           IR+ +   +G     R   +  +G W+  +E  +  IG   T ++     + S TS   +
Sbjct: 472 IRRQRRTALG----NRDEPHSSSGNWSASSESGRTSIGSEITTTNTHPKSSASSTSLNHS 527

Query: 398 NPIALAAP 421
           NPI+ +AP
Sbjct: 528 NPISSSAP 535


>AB090814-2|BAC57904.1| 1049|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1049

 Score = 25.0 bits (52), Expect = 2.5
 Identities = 10/22 (45%), Positives = 13/22 (59%)
 Frame = -1

Query: 763 PRKQCPRSGRSALTVQFPTHGT 698
           P +QCP   +S +   FPTH T
Sbjct: 361 PVEQCPVKLKSIIETLFPTHPT 382


>AF532982-1|AAQ10289.1|  459|Anopheles gambiae putative RNA
           methylase protein.
          Length = 459

 Score = 24.2 bits (50), Expect = 4.5
 Identities = 13/41 (31%), Positives = 19/41 (46%)
 Frame = -3

Query: 614 SLQHLPAAGV*LFRKPI*HQW*FFRLGLEPNQLATAPLCVL 492
           ++Q+LP  G    + P  H W     GL+P  +   P  VL
Sbjct: 132 TMQYLPVEGPVNLKTPDVHYWYIEFWGLDPMDVPEQPYDVL 172


>AY578810-1|AAT07315.1|  897|Anopheles gambiae smurf protein.
          Length = 897

 Score = 23.8 bits (49), Expect = 5.9
 Identities = 10/23 (43%), Positives = 15/23 (65%)
 Frame = +2

Query: 356 ILVPTRSKTSALGTNPIALAAPA 424
           I+V   S+ SA G  P+A+ +PA
Sbjct: 121 IIVSLLSRDSATGGTPLAIVSPA 143


>AF291654-1|AAG00600.1| 1340|Anopheles gambiae thioester-containing
            protein I protein.
          Length = 1340

 Score = 23.8 bits (49), Expect = 5.9
 Identities = 21/64 (32%), Positives = 27/64 (42%), Gaps = 2/64 (3%)
 Frame = -2

Query: 519  AGNGSSLCTCISTLPIATAVVAKSTTKLS-PFLAGAAKAMGFVPNALVLD-LVGTNIGEE 346
            A NGS          + T V+      L+ P   G    + FVPN LVLD L  T   E+
Sbjct: 826  ADNGSKKIEFRLNPNLLTMVIKNLDNLLAVPTGCGEQNMVKFVPNILVLDYLYATGSKEQ 885

Query: 345  FVND 334
             + D
Sbjct: 886  HLID 889


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 815,131
Number of Sequences: 2352
Number of extensions: 17684
Number of successful extensions: 57
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 43
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 57
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 79002570
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)