Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-0989
         (427 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB090820-2|BAC57916.1| 1222|Anopheles gambiae reverse transcript...    25   1.5  
AY146752-1|AAO12067.1|  277|Anopheles gambiae odorant-binding pr...    23   4.5  
AY146751-1|AAO12066.1|  277|Anopheles gambiae odorant-binding pr...    23   4.5  
AF457558-1|AAL68788.1|   56|Anopheles gambiae hypothetical prote...    23   4.5  

>AB090820-2|BAC57916.1| 1222|Anopheles gambiae reverse transcriptase
            protein.
          Length = 1222

 Score = 24.6 bits (51), Expect = 1.5
 Identities = 10/36 (27%), Positives = 19/36 (52%)
 Frame = -1

Query: 307  HGLNLREFASPSKTSVSQNLPPDRNLDSLRRSGEKI 200
            HG N R  ++PS+    +     R ++ LRR+  ++
Sbjct: 1161 HGRNRRSRSAPSEADTIRRRMRRREMERLRRTARRV 1196


>AY146752-1|AAO12067.1|  277|Anopheles gambiae odorant-binding
           protein AgamOBP35 protein.
          Length = 277

 Score = 23.0 bits (47), Expect = 4.5
 Identities = 8/21 (38%), Positives = 12/21 (57%)
 Frame = -3

Query: 77  IHQNRLKDYFAAQNHDGDNCR 15
           +H+N L +YF     D DN +
Sbjct: 85  LHENVLANYFVPATEDCDNAK 105


>AY146751-1|AAO12066.1|  277|Anopheles gambiae odorant-binding
           protein AgamOBP36 protein.
          Length = 277

 Score = 23.0 bits (47), Expect = 4.5
 Identities = 8/21 (38%), Positives = 12/21 (57%)
 Frame = -3

Query: 77  IHQNRLKDYFAAQNHDGDNCR 15
           +H+N L +YF     D DN +
Sbjct: 85  LHENVLANYFVPATEDCDNAK 105


>AF457558-1|AAL68788.1|   56|Anopheles gambiae hypothetical protein
           11 protein.
          Length = 56

 Score = 23.0 bits (47), Expect = 4.5
 Identities = 7/23 (30%), Positives = 15/23 (65%)
 Frame = -3

Query: 191 LIVMNLIFFFLEHCFAFYIFLIL 123
           L+++  +FF+  HC   Y++L +
Sbjct: 12  LVLLICLFFYHTHCTTAYLWLAM 34


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 405,313
Number of Sequences: 2352
Number of extensions: 7324
Number of successful extensions: 4
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 563,979
effective HSP length: 59
effective length of database: 425,211
effective search space used: 34867302
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)