Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-0986
         (685 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

03_05_0327 - 23154014-23154942,23155169-23155316,23155606-231566...    30   1.5  
09_04_0690 - 19488879-19488999,19489143-19489390,19489969-194901...    29   4.5  
06_03_1458 + 30301585-30301775,30302131-30302245,30302345-303024...    28   6.0  
03_01_0659 + 4829496-4829596,4830033-4830083,4832527-4834237           28   6.0  
12_02_0966 - 24906361-24906958,24907084-24907250,24907403-249076...    28   7.9  

>03_05_0327 -
           23154014-23154942,23155169-23155316,23155606-23156622,
           23156753-23157217,23160258-23161247
          Length = 1182

 Score = 30.3 bits (65), Expect = 1.5
 Identities = 11/19 (57%), Positives = 18/19 (94%)
 Frame = +3

Query: 333 AKRKRGKNVEKTPSQSGGD 389
           +KRK+GK+++KTP++SG D
Sbjct: 714 SKRKKGKSLKKTPAKSGHD 732


>09_04_0690 -
           19488879-19488999,19489143-19489390,19489969-19490196,
           19495784-19495897
          Length = 236

 Score = 28.7 bits (61), Expect = 4.5
 Identities = 13/34 (38%), Positives = 20/34 (58%)
 Frame = +3

Query: 84  IISNFTTKLTPKHRKVIFSNNKINENNQNGATNE 185
           I+S    +LTPK      S N+ ++N Q+G TN+
Sbjct: 102 IVSANIYQLTPKQLSTATSGNRRHKNEQHGLTND 135


>06_03_1458 +
           30301585-30301775,30302131-30302245,30302345-30302430,
           30302552-30302662,30303154-30303208,30303327-30303437,
           30304347-30304403,30304847-30305016,30305103-30305210,
           30305643-30305716,30305757-30305779,30306188-30306283,
           30306502-30306582,30306934-30307068,30307162-30307227,
           30307283-30307297
          Length = 497

 Score = 28.3 bits (60), Expect = 6.0
 Identities = 10/28 (35%), Positives = 18/28 (64%)
 Frame = +3

Query: 132 IFSNNKINENNQNGATNEIFILRKLYRK 215
           +  ++++NEN Q     E+FI+RK+  K
Sbjct: 313 VLKSDRLNENMQEEFNEEVFIMRKIRHK 340


>03_01_0659 + 4829496-4829596,4830033-4830083,4832527-4834237
          Length = 620

 Score = 28.3 bits (60), Expect = 6.0
 Identities = 9/26 (34%), Positives = 16/26 (61%)
 Frame = +3

Query: 18  HSHYQLDRNTGTTYTRWRVRLFIISN 95
           HS+Y+L+   G  Y  W+ R  ++S+
Sbjct: 592 HSYYKLEERDGALYLGWKNRKLVVSS 617


>12_02_0966 -
           24906361-24906958,24907084-24907250,24907403-24907650,
           24907824-24908001,24908196-24908372,24908459-24908563,
           24908633-24908770,24909757-24910836
          Length = 896

 Score = 27.9 bits (59), Expect = 7.9
 Identities = 12/29 (41%), Positives = 16/29 (55%)
 Frame = -3

Query: 356 IFASFSLRLYVKNTTVLPQKIGKNPIGSC 270
           IF      L +    +L QKIGK+P+ SC
Sbjct: 764 IFEQMDFLLLLTKFDILEQKIGKSPLTSC 792


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,964,747
Number of Sequences: 37544
Number of extensions: 264830
Number of successful extensions: 547
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 538
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 546
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1733104716
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)