Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-0985
         (530 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.      28   0.045
AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.      28   0.045
Z69735-1|CAA93623.1|  162|Tribolium castaneum initiation factor ...    23   1.7  
EF468474-1|ABR25244.1|  516|Tribolium castaneum methoprene-toler...    21   5.1  
DQ342040-1|ABC69932.1|  822|Tribolium castaneum STIP protein.          21   8.9  

>AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.
          Length = 790

 Score = 28.3 bits (60), Expect = 0.045
 Identities = 12/27 (44%), Positives = 14/27 (51%)
 Frame = +1

Query: 433 HTPSWLPVMPNSSHLDAVPQATPISRS 513
           HTPS  P+ P +      P A PIS S
Sbjct: 189 HTPSMYPLSPGAGFRSPYPSALPISTS 215


>AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.
          Length = 682

 Score = 28.3 bits (60), Expect = 0.045
 Identities = 12/27 (44%), Positives = 14/27 (51%)
 Frame = +1

Query: 433 HTPSWLPVMPNSSHLDAVPQATPISRS 513
           HTPS  P+ P +      P A PIS S
Sbjct: 81  HTPSMYPLSPGAGFRSPYPSALPISTS 107


>Z69735-1|CAA93623.1|  162|Tribolium castaneum initiation factor
           5-like protein protein.
          Length = 162

 Score = 23.0 bits (47), Expect = 1.7
 Identities = 9/38 (23%), Positives = 17/38 (44%)
 Frame = +2

Query: 347 LLKGMMINTKQCPSAKSWRHPVRAKARSHTLHHGCQSC 460
           LL G +     CP  ++    +    +  T+  GC++C
Sbjct: 2   LLDGFIRKFVLCPECENPETELLVSTKRSTISQGCKAC 39


>EF468474-1|ABR25244.1|  516|Tribolium castaneum methoprene-tolerant
           protein.
          Length = 516

 Score = 21.4 bits (43), Expect = 5.1
 Identities = 8/22 (36%), Positives = 14/22 (63%)
 Frame = +1

Query: 370 YKAVSVSQELATPRESKSKKPH 435
           Y  V+ +Q+ +TP E+   KP+
Sbjct: 425 YGNVNENQDCSTPTENSPTKPY 446


>DQ342040-1|ABC69932.1|  822|Tribolium castaneum STIP protein.
          Length = 822

 Score = 20.6 bits (41), Expect = 8.9
 Identities = 7/25 (28%), Positives = 12/25 (48%)
 Frame = -3

Query: 465 VWHDWQP*WSVWLLAFALTGCRQLL 391
           +WH W P   + + A+    C  L+
Sbjct: 474 LWHTWMPVMRICVSAWNPKDCDPLI 498


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.314    0.132    0.390 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 126,073
Number of Sequences: 336
Number of extensions: 2758
Number of successful extensions: 5
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 12887571
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.5 bits)