Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-0985
(530 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC117114-1|AAI17115.1| 376|Homo sapiens SWI/SNF related, matrix... 151 1e-36
AJ011738-1|CAA09759.1| 376|Homo sapiens Ini1b protein. 151 1e-36
AB017523-1|BAC77068.1| 376|Homo sapiens Ini1 protein. 151 1e-36
AK024025-1|BAB14784.1| 394|Homo sapiens protein ( Homo sapiens ... 151 2e-36
DQ230988-1|ABB02184.1| 385|Homo sapiens SWI/SNF related, matrix... 145 1e-34
CR456581-1|CAG30467.1| 385|Homo sapiens SMARCB1 protein. 145 1e-34
AJ011737-1|CAA09758.1| 385|Homo sapiens integrase interactor 1a... 145 1e-34
U04847-1|AAA81905.1| 385|Homo sapiens Ini1 protein. 142 9e-34
Y17118-1|CAA76639.1| 355|Homo sapiens SNF5/INI1 protein protein. 105 7e-23
AY207470-1|AAO59166.1| 80|Homo sapiens integrase interactor 1 ... 52 1e-06
AY207471-1|AAO59167.1| 89|Homo sapiens integrase interactor 1 ... 47 4e-05
BC150265-1|AAI50266.1| 1481|Homo sapiens CRKRS protein protein. 30 4.4
AF227198-1|AAF36401.1| 1490|Homo sapiens CrkRS protein. 30 4.4
AB020711-1|BAA74927.2| 1535|Homo sapiens KIAA0904 protein protein. 30 4.4
>BC117114-1|AAI17115.1| 376|Homo sapiens SWI/SNF related, matrix
associated, actin dependent regulator of chromatin, sub
protein.
Length = 376
Score = 151 bits (366), Expect = 1e-36
Identities = 78/146 (53%), Positives = 105/146 (71%), Gaps = 5/146 (3%)
Frame = +1
Query: 97 MAL-RTYGDKPISFQIEEGGDFYCVGSEVGNYLRLFRGSLYKKYPGMCRRTLTNEERKRL 273
MAL +T+G KP+ FQ+E+ G+FY +GSEVGNYLR+FRGSLYK+YP + RR T EERK++
Sbjct: 4 MALSKTFGQKPVKFQLEDDGEFYMIGSEVGNYLRMFRGSLYKRYPSLWRRLATVEERKKI 63
Query: 274 I--DNGLGPHXXXXXXXXXKASEVEDIIEGNDDKYKAVSVSQELAT-PRESKSKKPHTPS 444
+ + G KASEVE+I++GND+KYKAVS+S E T RE K+K+
Sbjct: 64 VASSHDHGYTTLATSVTLLKASEVEEILDGNDEKYKAVSISTEPPTYLREQKAKR--NSQ 121
Query: 445 WLPVMPNSS-HLDAVPQATPISRSRV 519
W+P +PNSS HLDAVP +T I+R+R+
Sbjct: 122 WVPTLPNSSHHLDAVPCSTTINRNRM 147
>AJ011738-1|CAA09759.1| 376|Homo sapiens Ini1b protein.
Length = 376
Score = 151 bits (366), Expect = 1e-36
Identities = 78/146 (53%), Positives = 105/146 (71%), Gaps = 5/146 (3%)
Frame = +1
Query: 97 MAL-RTYGDKPISFQIEEGGDFYCVGSEVGNYLRLFRGSLYKKYPGMCRRTLTNEERKRL 273
MAL +T+G KP+ FQ+E+ G+FY +GSEVGNYLR+FRGSLYK+YP + RR T EERK++
Sbjct: 4 MALSKTFGQKPVKFQLEDDGEFYMIGSEVGNYLRMFRGSLYKRYPSLWRRLATVEERKKI 63
Query: 274 I--DNGLGPHXXXXXXXXXKASEVEDIIEGNDDKYKAVSVSQELAT-PRESKSKKPHTPS 444
+ + G KASEVE+I++GND+KYKAVS+S E T RE K+K+
Sbjct: 64 VASSHDHGYTTLATSVTLLKASEVEEILDGNDEKYKAVSISTEPPTYLREQKAKR--NSQ 121
Query: 445 WLPVMPNSS-HLDAVPQATPISRSRV 519
W+P +PNSS HLDAVP +T I+R+R+
Sbjct: 122 WVPTLPNSSHHLDAVPCSTTINRNRM 147
>AB017523-1|BAC77068.1| 376|Homo sapiens Ini1 protein.
Length = 376
Score = 151 bits (366), Expect = 1e-36
Identities = 78/146 (53%), Positives = 105/146 (71%), Gaps = 5/146 (3%)
Frame = +1
Query: 97 MAL-RTYGDKPISFQIEEGGDFYCVGSEVGNYLRLFRGSLYKKYPGMCRRTLTNEERKRL 273
MAL +T+G KP+ FQ+E+ G+FY +GSEVGNYLR+FRGSLYK+YP + RR T EERK++
Sbjct: 4 MALSKTFGQKPVKFQLEDDGEFYMIGSEVGNYLRMFRGSLYKRYPSLWRRLATVEERKKI 63
Query: 274 I--DNGLGPHXXXXXXXXXKASEVEDIIEGNDDKYKAVSVSQELAT-PRESKSKKPHTPS 444
+ + G KASEVE+I++GND+KYKAVS+S E T RE K+K+
Sbjct: 64 VASSHDHGYTTLATSVTLLKASEVEEILDGNDEKYKAVSISTEPPTYLREQKAKR--NSQ 121
Query: 445 WLPVMPNSS-HLDAVPQATPISRSRV 519
W+P +PNSS HLDAVP +T I+R+R+
Sbjct: 122 WVPTLPNSSHHLDAVPCSTTINRNRM 147
>AK024025-1|BAB14784.1| 394|Homo sapiens protein ( Homo sapiens
cDNA FLJ13963 fis, clone Y79AA1001299, highly similar to
Homo sapiens mRNA for integrase interactor 1b protein
(INI1B). ).
Length = 394
Score = 151 bits (365), Expect = 2e-36
Identities = 78/146 (53%), Positives = 104/146 (71%), Gaps = 5/146 (3%)
Frame = +1
Query: 97 MAL-RTYGDKPISFQIEEGGDFYCVGSEVGNYLRLFRGSLYKKYPGMCRRTLTNEERKRL 273
MAL +T+G KP+ FQ+E+ G+FY +GSEVGNYLR+FRGSLYK+YP + RR T EERK++
Sbjct: 4 MALSKTFGQKPVKFQLEDDGEFYMIGSEVGNYLRMFRGSLYKRYPSLWRRLATVEERKKI 63
Query: 274 I--DNGLGPHXXXXXXXXXKASEVEDIIEGNDDKYKAVSVSQELAT-PRESKSKKPHTPS 444
+ + G KASEVE+I++GND+KYKAVS+S E T RE K+K+
Sbjct: 64 VASSHDHGYTTLATSVTLLKASEVEEILDGNDEKYKAVSISTEPPTYLREQKAKR--NSQ 121
Query: 445 WLPVMPNSS-HLDAVPQATPISRSRV 519
W+P +PNSS HLDAVP +T I+R R+
Sbjct: 122 WVPTLPNSSHHLDAVPCSTTINRDRM 147
>DQ230988-1|ABB02184.1| 385|Homo sapiens SWI/SNF related, matrix
associated, actin dependent regulator of chromatin, sub
protein.
Length = 385
Score = 145 bits (351), Expect = 1e-34
Identities = 79/155 (50%), Positives = 107/155 (69%), Gaps = 14/155 (9%)
Frame = +1
Query: 97 MAL-RTYGDKPISFQIEEGGDFYCVGSEVGNYLRLFRGSLYKKYPGMCRRTLTNEERKRL 273
MAL +T+G KP+ FQ+E+ G+FY +GSEVGNYLR+FRGSLYK+YP + RR T EERK++
Sbjct: 4 MALSKTFGQKPVKFQLEDDGEFYMIGSEVGNYLRMFRGSLYKRYPSLWRRLATVEERKKI 63
Query: 274 IDNGLG----PH-------XXXXXXXXXKASEVEDIIEGNDDKYKAVSVSQELAT-PRES 417
+ + G P+ KASEVE+I++GND+KYKAVS+S E T RE
Sbjct: 64 VASSHGKKTKPNTKDHGYTTLATSVTLLKASEVEEILDGNDEKYKAVSISTEPPTYLREQ 123
Query: 418 KSKKPHTPSWLPVMPNSS-HLDAVPQATPISRSRV 519
K+K+ W+P +PNSS HLDAVP +T I+R+R+
Sbjct: 124 KAKR--NSQWVPTLPNSSHHLDAVPCSTTINRNRM 156
>CR456581-1|CAG30467.1| 385|Homo sapiens SMARCB1 protein.
Length = 385
Score = 145 bits (351), Expect = 1e-34
Identities = 79/155 (50%), Positives = 107/155 (69%), Gaps = 14/155 (9%)
Frame = +1
Query: 97 MAL-RTYGDKPISFQIEEGGDFYCVGSEVGNYLRLFRGSLYKKYPGMCRRTLTNEERKRL 273
MAL +T+G KP+ FQ+E+ G+FY +GSEVGNYLR+FRGSLYK+YP + RR T EERK++
Sbjct: 4 MALSKTFGQKPVKFQLEDDGEFYMIGSEVGNYLRMFRGSLYKRYPSLWRRLATVEERKKI 63
Query: 274 IDNGLG----PH-------XXXXXXXXXKASEVEDIIEGNDDKYKAVSVSQELAT-PRES 417
+ + G P+ KASEVE+I++GND+KYKAVS+S E T RE
Sbjct: 64 VASSHGKKTKPNTKDHGYTTLATSVTLLKASEVEEILDGNDEKYKAVSISTEPPTYLREQ 123
Query: 418 KSKKPHTPSWLPVMPNSS-HLDAVPQATPISRSRV 519
K+K+ W+P +PNSS HLDAVP +T I+R+R+
Sbjct: 124 KAKR--NSQWVPTLPNSSHHLDAVPCSTTINRNRM 156
>AJ011737-1|CAA09758.1| 385|Homo sapiens integrase interactor 1a
protein (INI1A) protein.
Length = 385
Score = 145 bits (351), Expect = 1e-34
Identities = 79/155 (50%), Positives = 107/155 (69%), Gaps = 14/155 (9%)
Frame = +1
Query: 97 MAL-RTYGDKPISFQIEEGGDFYCVGSEVGNYLRLFRGSLYKKYPGMCRRTLTNEERKRL 273
MAL +T+G KP+ FQ+E+ G+FY +GSEVGNYLR+FRGSLYK+YP + RR T EERK++
Sbjct: 4 MALSKTFGQKPVKFQLEDDGEFYMIGSEVGNYLRMFRGSLYKRYPSLWRRLATVEERKKI 63
Query: 274 IDNGLG----PH-------XXXXXXXXXKASEVEDIIEGNDDKYKAVSVSQELAT-PRES 417
+ + G P+ KASEVE+I++GND+KYKAVS+S E T RE
Sbjct: 64 VASSHGKKTKPNTKDHGYTTLATSVTLLKASEVEEILDGNDEKYKAVSISTEPPTYLREQ 123
Query: 418 KSKKPHTPSWLPVMPNSS-HLDAVPQATPISRSRV 519
K+K+ W+P +PNSS HLDAVP +T I+R+R+
Sbjct: 124 KAKR--NSQWVPTLPNSSHHLDAVPCSTTINRNRM 156
>U04847-1|AAA81905.1| 385|Homo sapiens Ini1 protein.
Length = 385
Score = 142 bits (343), Expect = 9e-34
Identities = 78/155 (50%), Positives = 106/155 (68%), Gaps = 14/155 (9%)
Frame = +1
Query: 97 MAL-RTYGDKPISFQIEEGGDFYCVGSEVGNYLRLFRGSLYKKYPGMCRRTLTNEERKRL 273
MAL +T+G KP+ FQ+E+ G+FY +GSEVGNYLR+FRGSLYK+YP + RR T EERK++
Sbjct: 4 MALSKTFGQKPVKFQLEDDGEFYMIGSEVGNYLRMFRGSLYKRYPSLWRRLATVEERKKI 63
Query: 274 IDNGLG----PH-------XXXXXXXXXKASEVEDIIEGNDDKYKAVSVSQELAT-PRES 417
+ + G P+ KASEVE+I++GND+KYKAVS+S E T RE
Sbjct: 64 VASSHGKKTKPNTKDHGYTTLATSVTLLKASEVEEILDGNDEKYKAVSISTEPPTYLREQ 123
Query: 418 KSKKPHTPSWLPVMPNSS-HLDAVPQATPISRSRV 519
K+K+ W+P + NSS HLDAVP +T I+R+R+
Sbjct: 124 KAKR--NSQWVPTLSNSSHHLDAVPCSTTINRNRM 156
>Y17118-1|CAA76639.1| 355|Homo sapiens SNF5/INI1 protein protein.
Length = 355
Score = 105 bits (253), Expect = 7e-23
Identities = 62/127 (48%), Positives = 83/127 (65%), Gaps = 13/127 (10%)
Frame = +1
Query: 178 VGNYLRLFRGSLYKKYPGMCRRTLTNEERKRLIDNGLG----PHXXXXXXXXX------- 324
VGNYLR+FRGSLYK+YP + RR T EERK+++ + G P+
Sbjct: 2 VGNYLRMFRGSLYKRYPSLWRRLATVEERKKIVASSHGKKTKPNTKDHGYTTLATSVTLL 61
Query: 325 KASEVEDIIEGNDDKYKAVSVSQELAT-PRESKSKKPHTPSWLPVMPNSS-HLDAVPQAT 498
KASEVE+I++GND+KYKAVS+S E T RE K+K+ W+P + NSS HLDAVP +T
Sbjct: 62 KASEVEEILDGNDEKYKAVSISTEPPTYLREQKAKR--NSQWVPTLSNSSHHLDAVPCST 119
Query: 499 PISRSRV 519
I+R+R+
Sbjct: 120 TINRNRM 126
>AY207470-1|AAO59166.1| 80|Homo sapiens integrase interactor 1
protein isoform D protein.
Length = 80
Score = 52.4 bits (120), Expect = 1e-06
Identities = 31/67 (46%), Positives = 42/67 (62%), Gaps = 3/67 (4%)
Frame = +1
Query: 238 RRTLTNEERKRLI--DNGLGPHXXXXXXXXXKASEVEDIIEGNDDKYKAVSVSQELAT-P 408
RR T EERK+++ + G KASEVE+I++GND+KYKAVS+S E T
Sbjct: 2 RRLATVEERKKIVASSHDHGYTTLATSVTLLKASEVEEILDGNDEKYKAVSISTEPPTYL 61
Query: 409 RESKSKK 429
RE K+K+
Sbjct: 62 REQKAKR 68
>AY207471-1|AAO59167.1| 89|Homo sapiens integrase interactor 1
protein isoform E protein.
Length = 89
Score = 47.2 bits (107), Expect = 4e-05
Identities = 23/36 (63%), Positives = 30/36 (83%), Gaps = 1/36 (2%)
Frame = +1
Query: 325 KASEVEDIIEGNDDKYKAVSVSQELAT-PRESKSKK 429
KASEVE+I++GND+KYKAVS+S E T RE K+K+
Sbjct: 42 KASEVEEILDGNDEKYKAVSISTEPPTYLREQKAKR 77
>BC150265-1|AAI50266.1| 1481|Homo sapiens CRKRS protein protein.
Length = 1481
Score = 30.3 bits (65), Expect = 4.4
Identities = 17/56 (30%), Positives = 33/56 (58%), Gaps = 1/56 (1%)
Frame = +1
Query: 337 VEDI-IEGNDDKYKAVSVSQELATPRESKSKKPHTPSWLPVMPNSSHLDAVPQATP 501
V+D+ +G D K +++ +E+ TP+E+++ + TP LP + +S +P TP
Sbjct: 492 VKDLKAQGTRDS-KPIALKEEIVTPKETETSEKETPPPLPTI--ASPPPPLPTTTP 544
>AF227198-1|AAF36401.1| 1490|Homo sapiens CrkRS protein.
Length = 1490
Score = 30.3 bits (65), Expect = 4.4
Identities = 17/56 (30%), Positives = 33/56 (58%), Gaps = 1/56 (1%)
Frame = +1
Query: 337 VEDI-IEGNDDKYKAVSVSQELATPRESKSKKPHTPSWLPVMPNSSHLDAVPQATP 501
V+D+ +G D K +++ +E+ TP+E+++ + TP LP + +S +P TP
Sbjct: 492 VKDLKAQGTRDS-KPIALKEEIVTPKETETSEKETPPPLPTI--ASPPPPLPTTTP 544
>AB020711-1|BAA74927.2| 1535|Homo sapiens KIAA0904 protein protein.
Length = 1535
Score = 30.3 bits (65), Expect = 4.4
Identities = 17/56 (30%), Positives = 33/56 (58%), Gaps = 1/56 (1%)
Frame = +1
Query: 337 VEDI-IEGNDDKYKAVSVSQELATPRESKSKKPHTPSWLPVMPNSSHLDAVPQATP 501
V+D+ +G D K +++ +E+ TP+E+++ + TP LP + +S +P TP
Sbjct: 546 VKDLKAQGTRDS-KPIALKEEIVTPKETETSEKETPPPLPTI--ASPPPPLPTTTP 598
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.314 0.132 0.390
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 80,393,862
Number of Sequences: 237096
Number of extensions: 1676071
Number of successful extensions: 3454
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 3255
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3437
length of database: 76,859,062
effective HSP length: 85
effective length of database: 56,705,902
effective search space used: 5160237082
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.9 bits)
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