Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-0985
(530 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U28485-1|AAC77830.1| 370|Drosophila melanogaster SNR1 protein. 196 2e-50
AY070501-1|AAL47972.1| 370|Drosophila melanogaster GH08712p pro... 196 2e-50
AE014297-255|AAF52024.1| 370|Drosophila melanogaster CG1064-PA ... 196 2e-50
AE013599-261|AAS64791.1| 196|Drosophila melanogaster CG33351-PA... 31 1.3
AY118323-1|AAM48352.1| 1843|Drosophila melanogaster LD10526p pro... 29 5.2
AE014298-2899|AAF48990.3| 2006|Drosophila melanogaster CG12238-P... 29 5.2
AF298216-1|AAG30224.1| 2130|Drosophila melanogaster DNA polymera... 28 6.9
AF298215-1|AAG30223.1| 2130|Drosophila melanogaster DNA polymera... 28 6.9
AE013599-501|AAF59191.2| 2130|Drosophila melanogaster CG1925-PA ... 28 6.9
AY060248-1|AAL25287.1| 311|Drosophila melanogaster GH07217p pro... 28 9.1
AY058645-1|AAL13874.1| 850|Drosophila melanogaster LD34489p pro... 28 9.1
AE013599-3971|AAF47285.1| 536|Drosophila melanogaster CG30420-P... 28 9.1
AE013599-3967|AAF47283.2| 850|Drosophila melanogaster CG30420-P... 28 9.1
>U28485-1|AAC77830.1| 370|Drosophila melanogaster SNR1 protein.
Length = 370
Score = 196 bits (478), Expect = 2e-50
Identities = 93/145 (64%), Positives = 114/145 (78%), Gaps = 1/145 (0%)
Frame = +1
Query: 97 MALRTYGDKPISFQIEEGGDFYCVGSEVGNYLRLFRGSLYKKYPGMCRRTLTNEERKRLI 276
MAL+TYGDKP++FQ+EEGG++Y VGSEVGNY+R FRG LYKKYPGM R L+NEERKRL
Sbjct: 1 MALQTYGDKPVAFQLEEGGEYYYVGSEVGNYMRHFRGILYKKYPGMTRIVLSNEERKRLA 60
Query: 277 DNGLGPHXXXXXXXXXKASEVEDIIEGNDDKYKAVSV-SQELATPRESKSKKPHTPSWLP 453
++GL H +A EV+DI+ GND+KY+AVSV + + PRESKSKK P ++P
Sbjct: 61 ESGLSSHILASSVSLLRAVEVDDIMAGNDEKYRAVSVNTSDTPVPRESKSKK--QPQYVP 118
Query: 454 VMPNSSHLDAVPQATPISRSRVHNK 528
MPNSSHLDAVPQATPI+R+RVH K
Sbjct: 119 TMPNSSHLDAVPQATPINRNRVHTK 143
>AY070501-1|AAL47972.1| 370|Drosophila melanogaster GH08712p
protein.
Length = 370
Score = 196 bits (478), Expect = 2e-50
Identities = 93/145 (64%), Positives = 114/145 (78%), Gaps = 1/145 (0%)
Frame = +1
Query: 97 MALRTYGDKPISFQIEEGGDFYCVGSEVGNYLRLFRGSLYKKYPGMCRRTLTNEERKRLI 276
MAL+TYGDKP++FQ+EEGG++Y VGSEVGNY+R FRG LYKKYPGM R L+NEERKRL
Sbjct: 1 MALQTYGDKPVAFQLEEGGEYYYVGSEVGNYMRHFRGILYKKYPGMTRIVLSNEERKRLA 60
Query: 277 DNGLGPHXXXXXXXXXKASEVEDIIEGNDDKYKAVSV-SQELATPRESKSKKPHTPSWLP 453
++GL H +A EV+DI+ GND+KY+AVSV + + PRESKSKK P ++P
Sbjct: 61 ESGLSSHILASSVSLLRAVEVDDIMAGNDEKYRAVSVNTSDTPVPRESKSKK--QPQYVP 118
Query: 454 VMPNSSHLDAVPQATPISRSRVHNK 528
MPNSSHLDAVPQATPI+R+RVH K
Sbjct: 119 TMPNSSHLDAVPQATPINRNRVHTK 143
>AE014297-255|AAF52024.1| 370|Drosophila melanogaster CG1064-PA
protein.
Length = 370
Score = 196 bits (478), Expect = 2e-50
Identities = 93/145 (64%), Positives = 114/145 (78%), Gaps = 1/145 (0%)
Frame = +1
Query: 97 MALRTYGDKPISFQIEEGGDFYCVGSEVGNYLRLFRGSLYKKYPGMCRRTLTNEERKRLI 276
MAL+TYGDKP++FQ+EEGG++Y VGSEVGNY+R FRG LYKKYPGM R L+NEERKRL
Sbjct: 1 MALQTYGDKPVAFQLEEGGEYYYVGSEVGNYMRHFRGILYKKYPGMTRIVLSNEERKRLA 60
Query: 277 DNGLGPHXXXXXXXXXKASEVEDIIEGNDDKYKAVSV-SQELATPRESKSKKPHTPSWLP 453
++GL H +A EV+DI+ GND+KY+AVSV + + PRESKSKK P ++P
Sbjct: 61 ESGLSSHILASSVSLLRAVEVDDIMAGNDEKYRAVSVNTSDTPVPRESKSKK--QPQYVP 118
Query: 454 VMPNSSHLDAVPQATPISRSRVHNK 528
MPNSSHLDAVPQATPI+R+RVH K
Sbjct: 119 TMPNSSHLDAVPQATPINRNRVHTK 143
>AE013599-261|AAS64791.1| 196|Drosophila melanogaster CG33351-PA
protein.
Length = 196
Score = 30.7 bits (66), Expect = 1.3
Identities = 16/33 (48%), Positives = 20/33 (60%)
Frame = -1
Query: 428 FLLLLSRGVANSWLTDTALYLSSFPSIMSSTSD 330
F+LLL GV +SW TD L L P I S+ +D
Sbjct: 3 FVLLLLLGVTSSWATDYELLLED-PDIFSTCTD 34
>AY118323-1|AAM48352.1| 1843|Drosophila melanogaster LD10526p protein.
Length = 1843
Score = 28.7 bits (61), Expect = 5.2
Identities = 16/45 (35%), Positives = 25/45 (55%)
Frame = +1
Query: 154 DFYCVGSEVGNYLRLFRGSLYKKYPGMCRRTLTNEERKRLIDNGL 288
D + + +V YL + S +KYP + RR++ EER L + GL
Sbjct: 1174 DTFMIQEQVALYLGIT--SFKRKYPDLPRRSVDMEERNWLQEKGL 1216
>AE014298-2899|AAF48990.3| 2006|Drosophila melanogaster CG12238-PA
protein.
Length = 2006
Score = 28.7 bits (61), Expect = 5.2
Identities = 16/45 (35%), Positives = 25/45 (55%)
Frame = +1
Query: 154 DFYCVGSEVGNYLRLFRGSLYKKYPGMCRRTLTNEERKRLIDNGL 288
D + + +V YL + S +KYP + RR++ EER L + GL
Sbjct: 1337 DTFMIQEQVALYLGIT--SFKRKYPDLPRRSVDMEERNWLQEKGL 1379
>AF298216-1|AAG30224.1| 2130|Drosophila melanogaster DNA polymerase
zeta catalyticsubunit protein.
Length = 2130
Score = 28.3 bits (60), Expect = 6.9
Identities = 18/64 (28%), Positives = 28/64 (43%), Gaps = 3/64 (4%)
Frame = +1
Query: 325 KASEVEDIIEGNDDKYKAVSVSQELATPRESKSKKPHTP---SWLPVMPNSSHLDAVPQA 495
KAS I+G DD+ + + + + S SK P TP LP P + A +
Sbjct: 535 KASSKLPQIDGADDRLQRTPIKSISSKSKSSPSKTPTTPIGQKSLPKSPRTPKTSAAKKY 594
Query: 496 TPIS 507
P++
Sbjct: 595 APLA 598
>AF298215-1|AAG30223.1| 2130|Drosophila melanogaster DNA polymerase
zeta catalyticsubunit protein.
Length = 2130
Score = 28.3 bits (60), Expect = 6.9
Identities = 13/42 (30%), Positives = 20/42 (47%)
Frame = +1
Query: 349 IEGNDDKYKAVSVSQELATPRESKSKKPHTPSWLPVMPNSSH 474
I+G DD+ + + + + S SK P TP +P S H
Sbjct: 543 IDGADDRLQRTPIKSISSKSKSSPSKTPTTPIGQKSLPKSPH 584
>AE013599-501|AAF59191.2| 2130|Drosophila melanogaster CG1925-PA
protein.
Length = 2130
Score = 28.3 bits (60), Expect = 6.9
Identities = 18/64 (28%), Positives = 28/64 (43%), Gaps = 3/64 (4%)
Frame = +1
Query: 325 KASEVEDIIEGNDDKYKAVSVSQELATPRESKSKKPHTP---SWLPVMPNSSHLDAVPQA 495
KAS I+G DD+ + + + + S SK P TP LP P + A +
Sbjct: 535 KASSKLPQIDGADDRLQRTPIKSISSKSKSSPSKTPTTPIGQKSLPKSPRTPKTSAAKKY 594
Query: 496 TPIS 507
P++
Sbjct: 595 APLA 598
>AY060248-1|AAL25287.1| 311|Drosophila melanogaster GH07217p
protein.
Length = 311
Score = 27.9 bits (59), Expect = 9.1
Identities = 14/54 (25%), Positives = 22/54 (40%)
Frame = +1
Query: 364 DKYKAVSVSQELATPRESKSKKPHTPSWLPVMPNSSHLDAVPQATPISRSRVHN 525
D+Y +P E+ S P +LP +PN L ++P + S N
Sbjct: 80 DQYDNAEAEASYGSPMEAVSDLQSPPLYLPRLPNLPPLPSLPNRPSLGNSPNRN 133
>AY058645-1|AAL13874.1| 850|Drosophila melanogaster LD34489p
protein.
Length = 850
Score = 27.9 bits (59), Expect = 9.1
Identities = 14/54 (25%), Positives = 22/54 (40%)
Frame = +1
Query: 364 DKYKAVSVSQELATPRESKSKKPHTPSWLPVMPNSSHLDAVPQATPISRSRVHN 525
D+Y +P E+ S P +LP +PN L ++P + S N
Sbjct: 436 DQYDNAEAEASYGSPMEAVSDLQSPPLYLPRLPNLPPLPSLPNRPSLGNSPNRN 489
>AE013599-3971|AAF47285.1| 536|Drosophila melanogaster CG30420-PB,
isoform B protein.
Length = 536
Score = 27.9 bits (59), Expect = 9.1
Identities = 14/54 (25%), Positives = 22/54 (40%)
Frame = +1
Query: 364 DKYKAVSVSQELATPRESKSKKPHTPSWLPVMPNSSHLDAVPQATPISRSRVHN 525
D+Y +P E+ S P +LP +PN L ++P + S N
Sbjct: 122 DQYDNAEAEASYGSPMEAVSDLQSPPLYLPRLPNLPPLPSLPNRPSLGNSPNRN 175
>AE013599-3967|AAF47283.2| 850|Drosophila melanogaster CG30420-PA,
isoform A protein.
Length = 850
Score = 27.9 bits (59), Expect = 9.1
Identities = 14/54 (25%), Positives = 22/54 (40%)
Frame = +1
Query: 364 DKYKAVSVSQELATPRESKSKKPHTPSWLPVMPNSSHLDAVPQATPISRSRVHN 525
D+Y +P E+ S P +LP +PN L ++P + S N
Sbjct: 436 DQYDNAEAEASYGSPMEAVSDLQSPPLYLPRLPNLPPLPSLPNRPSLGNSPNRN 489
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.314 0.132 0.390
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 24,236,634
Number of Sequences: 53049
Number of extensions: 496569
Number of successful extensions: 1122
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 1091
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1119
length of database: 24,988,368
effective HSP length: 80
effective length of database: 20,744,448
effective search space used: 1991467008
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.9 bits)
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