Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-0985
(530 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z32683-10|CAA83625.1| 381|Caenorhabditis elegans Hypothetical p... 101 3e-22
AC024772-3|AAF60538.1| 2344|Caenorhabditis elegans Hypothetical ... 30 1.2
AL110484-6|CAE46683.1| 1345|Caenorhabditis elegans Hypothetical ... 28 4.8
AL110484-5|CAB60334.3| 1343|Caenorhabditis elegans Hypothetical ... 28 4.8
AL031635-9|CAH04762.1| 1136|Caenorhabditis elegans Hypothetical ... 28 4.8
AL031635-8|CAA21041.2| 1088|Caenorhabditis elegans Hypothetical ... 28 4.8
Z79601-6|CAB01887.1| 872|Caenorhabditis elegans Hypothetical pr... 27 8.4
Z79596-9|CAB01859.1| 872|Caenorhabditis elegans Hypothetical pr... 27 8.4
AF067622-4|ABD63224.1| 338|Caenorhabditis elegans Hypothetical ... 27 8.4
AF067622-3|ABD63225.1| 447|Caenorhabditis elegans Hypothetical ... 27 8.4
>Z32683-10|CAA83625.1| 381|Caenorhabditis elegans Hypothetical
protein R07E5.3 protein.
Length = 381
Score = 101 bits (242), Expect = 3e-22
Identities = 54/150 (36%), Positives = 89/150 (59%), Gaps = 6/150 (4%)
Frame = +1
Query: 85 TTTKMALRTYGDKPISFQIEEGGDFYCVGSEVGNYLRLFRGSLYKKYPGMCRRTLTNEER 264
++TK +TYG +P SF ++E G+ Y +GSE+G YLRL RG+LYKKYP + R+ T++++
Sbjct: 3 SSTKTLSQTYGPRPQSFSLDEAGERYYIGSEIGAYLRLHRGTLYKKYPLLWRKVATSDDK 62
Query: 265 KRLIDNGLGPHXXXXXXXXXKASEVEDIIEGNDDKYKAVSVSQELATPR-ESKSK---KP 432
+L + +A EV+++++G+++KY+A + +TPR E S+ K
Sbjct: 63 DKLKQIAMSNAFLHTNIMLLRAHEVDELLDGSEEKYRAAGAAP--STPRTEGASRTVAKT 120
Query: 433 HTPSWL--PVMPNSSHLDAVPQATPISRSR 516
W V S HL++VP + PI+ SR
Sbjct: 121 PATGWAGQQVTSGSHHLESVPCSCPIAHSR 150
>AC024772-3|AAF60538.1| 2344|Caenorhabditis elegans Hypothetical
protein Y40C5A.3 protein.
Length = 2344
Score = 29.9 bits (64), Expect = 1.2
Identities = 20/48 (41%), Positives = 24/48 (50%), Gaps = 2/48 (4%)
Frame = +1
Query: 382 SVSQELATPRESKSKK--PHTPSWLPVMPNSSHLDAVPQATPISRSRV 519
SV+Q P S S P PS LPV P+SS + + P A S S V
Sbjct: 1613 SVTQAPIPPASSPSAPSIPSIPSTLPVAPSSSSVPSSPSAPSESTSTV 1660
>AL110484-6|CAE46683.1| 1345|Caenorhabditis elegans Hypothetical
protein Y38E10A.6b protein.
Length = 1345
Score = 27.9 bits (59), Expect = 4.8
Identities = 18/68 (26%), Positives = 24/68 (35%)
Frame = +1
Query: 325 KASEVEDIIEGNDDKYKAVSVSQELATPRESKSKKPHTPSWLPVMPNSSHLDAVPQATPI 504
KA E+E+I E KA QE+ + K P P + P S Q P
Sbjct: 927 KAQEIEEIEESPKKSEKAPEKPQEIQEIPKKSEKAPEKPQEIEKSPKKSEKRQEIQEIPQ 986
Query: 505 SRSRVHNK 528
+ K
Sbjct: 987 KSEKTSEK 994
>AL110484-5|CAB60334.3| 1343|Caenorhabditis elegans Hypothetical
protein Y38E10A.6a protein.
Length = 1343
Score = 27.9 bits (59), Expect = 4.8
Identities = 18/68 (26%), Positives = 24/68 (35%)
Frame = +1
Query: 325 KASEVEDIIEGNDDKYKAVSVSQELATPRESKSKKPHTPSWLPVMPNSSHLDAVPQATPI 504
KA E+E+I E KA QE+ + K P P + P S Q P
Sbjct: 925 KAQEIEEIEESPKKSEKAPEKPQEIQEIPKKSEKAPEKPQEIEKSPKKSEKRQEIQEIPQ 984
Query: 505 SRSRVHNK 528
+ K
Sbjct: 985 KSEKTSEK 992
>AL031635-9|CAH04762.1| 1136|Caenorhabditis elegans Hypothetical
protein Y47D3B.5b protein.
Length = 1136
Score = 27.9 bits (59), Expect = 4.8
Identities = 17/48 (35%), Positives = 27/48 (56%)
Frame = +1
Query: 379 VSVSQELATPRESKSKKPHTPSWLPVMPNSSHLDAVPQATPISRSRVH 522
VS+ ++L + KSKK + S P+ PNS H + TP+ ++ VH
Sbjct: 732 VSLCEDLKASK--KSKKSRSISSSPIPPNSLHEEET--QTPLRQNMVH 775
>AL031635-8|CAA21041.2| 1088|Caenorhabditis elegans Hypothetical
protein Y47D3B.5a protein.
Length = 1088
Score = 27.9 bits (59), Expect = 4.8
Identities = 17/48 (35%), Positives = 27/48 (56%)
Frame = +1
Query: 379 VSVSQELATPRESKSKKPHTPSWLPVMPNSSHLDAVPQATPISRSRVH 522
VS+ ++L + KSKK + S P+ PNS H + TP+ ++ VH
Sbjct: 732 VSLCEDLKASK--KSKKSRSISSSPIPPNSLHEEET--QTPLRQNMVH 775
>Z79601-6|CAB01887.1| 872|Caenorhabditis elegans Hypothetical
protein K09A9.6 protein.
Length = 872
Score = 27.1 bits (57), Expect = 8.4
Identities = 22/81 (27%), Positives = 31/81 (38%)
Frame = +1
Query: 193 RLFRGSLYKKYPGMCRRTLTNEERKRLIDNGLGPHXXXXXXXXXKASEVEDIIEGNDDKY 372
RLF G L KK EE K D L P K ++VE + + +DD
Sbjct: 155 RLFAG-LRKKITDRLNEKAVKEEPKSKNDQILNPRELRKLKKQQKTAKVEVVEDDDDDDD 213
Query: 373 KAVSVSQELATPRESKSKKPH 435
+ + A S+ +K H
Sbjct: 214 EDDDDVEAPAPQEPSRKQKAH 234
>Z79596-9|CAB01859.1| 872|Caenorhabditis elegans Hypothetical
protein K09A9.6 protein.
Length = 872
Score = 27.1 bits (57), Expect = 8.4
Identities = 22/81 (27%), Positives = 31/81 (38%)
Frame = +1
Query: 193 RLFRGSLYKKYPGMCRRTLTNEERKRLIDNGLGPHXXXXXXXXXKASEVEDIIEGNDDKY 372
RLF G L KK EE K D L P K ++VE + + +DD
Sbjct: 155 RLFAG-LRKKITDRLNEKAVKEEPKSKNDQILNPRELRKLKKQQKTAKVEVVEDDDDDDD 213
Query: 373 KAVSVSQELATPRESKSKKPH 435
+ + A S+ +K H
Sbjct: 214 EDDDDVEAPAPQEPSRKQKAH 234
>AF067622-4|ABD63224.1| 338|Caenorhabditis elegans Hypothetical
protein F33E11.6a protein.
Length = 338
Score = 27.1 bits (57), Expect = 8.4
Identities = 14/43 (32%), Positives = 24/43 (55%)
Frame = +1
Query: 145 EGGDFYCVGSEVGNYLRLFRGSLYKKYPGMCRRTLTNEERKRL 273
+ GD + + ++G L + S +KYP RR + +EER+ L
Sbjct: 70 KSGDRWFLQEQIGELLDI--KSFSRKYPDFTRRKVNHEEREFL 110
>AF067622-3|ABD63225.1| 447|Caenorhabditis elegans Hypothetical
protein F33E11.6b protein.
Length = 447
Score = 27.1 bits (57), Expect = 8.4
Identities = 14/43 (32%), Positives = 24/43 (55%)
Frame = +1
Query: 145 EGGDFYCVGSEVGNYLRLFRGSLYKKYPGMCRRTLTNEERKRL 273
+ GD + + ++G L + S +KYP RR + +EER+ L
Sbjct: 70 KSGDRWFLQEQIGELLDI--KSFSRKYPDFTRRKVNHEEREFL 110
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.314 0.132 0.390
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,236,961
Number of Sequences: 27780
Number of extensions: 247246
Number of successful extensions: 516
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 496
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 514
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1049512662
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.9 bits)
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