Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-0985
(530 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At3g11690.1 68416.m01433 expressed protein 33 0.16
At5g11530.1 68418.m01345 embryonic flower 1 (EMF1) identical to ... 29 1.5
At1g48920.1 68414.m05480 nucleolin, putative similar to nuM1 pro... 29 2.6
At1g70620.1 68414.m08138 cyclin-related contains weak similarity... 28 3.4
At3g48160.2 68416.m05253 transcription factor, putative / E2F-li... 28 4.5
At3g48160.1 68416.m05252 transcription factor, putative / E2F-li... 28 4.5
At3g07020.2 68416.m00834 UDP-glucose:sterol glucosyltransferase ... 28 4.5
At3g07020.1 68416.m00833 UDP-glucose:sterol glucosyltransferase ... 28 4.5
At1g62600.1 68414.m07062 flavin-containing monooxygenase family ... 27 6.0
At3g24870.1 68416.m03119 expressed protein 27 7.9
At1g63370.1 68414.m07164 flavin-containing monooxygenase family ... 27 7.9
At1g62620.1 68414.m07065 flavin-containing monooxygenase family ... 27 7.9
At1g32450.1 68414.m04005 proton-dependent oligopeptide transport... 27 7.9
>At3g11690.1 68416.m01433 expressed protein
Length = 252
Score = 32.7 bits (71), Expect = 0.16
Identities = 12/29 (41%), Positives = 20/29 (68%)
Frame = +1
Query: 208 SLYKKYPGMCRRTLTNEERKRLIDNGLGP 294
++YK G+CRR + + RK+L+ NG+ P
Sbjct: 83 AIYKVPKGICRRAIRSRRRKQLVKNGILP 111
>At5g11530.1 68418.m01345 embryonic flower 1 (EMF1) identical to
embryonic flower 1 [Arabidopsis thaliana] GI:15430697
Length = 1096
Score = 29.5 bits (63), Expect = 1.5
Identities = 13/48 (27%), Positives = 26/48 (54%)
Frame = +1
Query: 124 PISFQIEEGGDFYCVGSEVGNYLRLFRGSLYKKYPGMCRRTLTNEERK 267
P F I E G+ Y + G +L++ + + +KK P +C++ + +K
Sbjct: 1043 PADFTIPEPGNVYML---TGEHLKVRKRTTFKKKPAVCKQDAMKQTKK 1087
>At1g48920.1 68414.m05480 nucleolin, putative similar to nuM1
protein GI:1279562 from [Medicago sativa]
Length = 557
Score = 28.7 bits (61), Expect = 2.6
Identities = 20/62 (32%), Positives = 28/62 (45%)
Frame = +1
Query: 340 EDIIEGNDDKYKAVSVSQELATPRESKSKKPHTPSWLPVMPNSSHLDAVPQATPISRSRV 519
ED E ++ K S E+ +S +K+P TPS P S L A + I R+ V
Sbjct: 255 EDESEDEEETPKKKSSDVEMVDAEKSSAKQPKTPS-TPAAGGSKTLFAANLSFNIERADV 313
Query: 520 HN 525
N
Sbjct: 314 EN 315
>At1g70620.1 68414.m08138 cyclin-related contains weak similarity to
Swiss-Prot:P35662 cylicin I (Multiple-band polypeptide
I) [Bos taurus]
Length = 897
Score = 28.3 bits (60), Expect = 3.4
Identities = 15/55 (27%), Positives = 27/55 (49%)
Frame = +1
Query: 352 EGNDDKYKAVSVSQELATPRESKSKKPHTPSWLPVMPNSSHLDAVPQATPISRSR 516
E +DD + S ++ +P KS++ H S P +S H + + + SRS+
Sbjct: 828 ESSDDSKRKSSSKRKNRSPSPGKSRRRHVSSRSPHSKHSQHKNTLYSSHDKSRSK 882
>At3g48160.2 68416.m05253 transcription factor, putative / E2F-like
repressor E2L3 (E2L3) identical to E2F-like repressor
E2L3 [Arabidopsis thaliana] GI:20502508
Length = 403
Score = 27.9 bits (59), Expect = 4.5
Identities = 16/33 (48%), Positives = 18/33 (54%)
Frame = +1
Query: 343 DIIEGNDDKYKAVSVSQELATPRESKSKKPHTP 441
DI N + K+ S SQE AT R K KK TP
Sbjct: 276 DITNVNVKRSKSSSSSQENATERRLKMKKHSTP 308
>At3g48160.1 68416.m05252 transcription factor, putative / E2F-like
repressor E2L3 (E2L3) identical to E2F-like repressor
E2L3 [Arabidopsis thaliana] GI:20502508
Length = 379
Score = 27.9 bits (59), Expect = 4.5
Identities = 16/33 (48%), Positives = 18/33 (54%)
Frame = +1
Query: 343 DIIEGNDDKYKAVSVSQELATPRESKSKKPHTP 441
DI N + K+ S SQE AT R K KK TP
Sbjct: 276 DITNVNVKRSKSSSSSQENATERRLKMKKHSTP 308
>At3g07020.2 68416.m00834 UDP-glucose:sterol glucosyltransferase
(UGT80A2) identical to UDP-glucose:sterol
glucosyltransferase [Arabidopsis thaliana] GI:2462931;
contains Pfam profile: PF03033 glycosyltransferase
family 28 N-terminal domain
Length = 637
Score = 27.9 bits (59), Expect = 4.5
Identities = 14/32 (43%), Positives = 21/32 (65%)
Frame = +3
Query: 375 SSVRQPRVGDTP*EQKQEATHSIMAASHAKLF 470
SS QPR+ + E++Q+ TH I+A AK+F
Sbjct: 97 SSTNQPRLDKSKTERQQKVTH-ILAEDAAKIF 127
>At3g07020.1 68416.m00833 UDP-glucose:sterol glucosyltransferase
(UGT80A2) identical to UDP-glucose:sterol
glucosyltransferase [Arabidopsis thaliana] GI:2462931;
contains Pfam profile: PF03033 glycosyltransferase
family 28 N-terminal domain
Length = 637
Score = 27.9 bits (59), Expect = 4.5
Identities = 14/32 (43%), Positives = 21/32 (65%)
Frame = +3
Query: 375 SSVRQPRVGDTP*EQKQEATHSIMAASHAKLF 470
SS QPR+ + E++Q+ TH I+A AK+F
Sbjct: 97 SSTNQPRLDKSKTERQQKVTH-ILAEDAAKIF 127
>At1g62600.1 68414.m07062 flavin-containing monooxygenase family
protein / FMO family protein low similarity to
flavin-containing monooxygenase 2 from Cavia porcellus
[SP|P36366]; contains Pfam profile PF00743
Flavin-binding monooxygenase-like
Length = 452
Score = 27.5 bits (58), Expect = 6.0
Identities = 8/20 (40%), Positives = 12/20 (60%)
Frame = +3
Query: 189 PALVPWVTLQEVPWHVPAYP 248
PA PW++ +PW V +P
Sbjct: 321 PAFAPWLSFVGIPWKVVPFP 340
>At3g24870.1 68416.m03119 expressed protein
Length = 1841
Score = 27.1 bits (57), Expect = 7.9
Identities = 10/18 (55%), Positives = 14/18 (77%)
Frame = +1
Query: 103 LRTYGDKPISFQIEEGGD 156
LRTY DKP+ F + +GG+
Sbjct: 46 LRTYDDKPLLFYLLQGGN 63
>At1g63370.1 68414.m07164 flavin-containing monooxygenase family
protein / FMO family protein similar to FMO5 from Cavia
porcellus [SP|P49109]; contains Pfam profile: PF00743
Flavin-binding monooxygenase-like
Length = 450
Score = 27.1 bits (57), Expect = 7.9
Identities = 8/20 (40%), Positives = 12/20 (60%)
Frame = +3
Query: 189 PALVPWVTLQEVPWHVPAYP 248
PA PW++ +PW V +P
Sbjct: 319 PAFAPWLSFIGIPWQVLPFP 338
>At1g62620.1 68414.m07065 flavin-containing monooxygenase family
protein / FMO family protein similar to
flavin-containing monooxygenase 3 (FMO3) from Rattus
norvegicus [GI:12006730], FMO1 from Canis familiaris]
[GI:15420722], FMO1 from Homo sapiens [SP|Q01740];
contains Pfam profile: PF00743 Flavin-binding
monooxygenase-like
Length = 450
Score = 27.1 bits (57), Expect = 7.9
Identities = 8/20 (40%), Positives = 12/20 (60%)
Frame = +3
Query: 189 PALVPWVTLQEVPWHVPAYP 248
PA PW++ +PW V +P
Sbjct: 319 PAFAPWLSFIGIPWQVLPFP 338
>At1g32450.1 68414.m04005 proton-dependent oligopeptide transport
(POT) family protein contains Pfam profile: PF00854 POT
family
Length = 614
Score = 27.1 bits (57), Expect = 7.9
Identities = 13/32 (40%), Positives = 15/32 (46%)
Frame = +1
Query: 385 VSQELATPRESKSKKPHTPSWLPVMPNSSHLD 480
VS L T S + H P W+P N HLD
Sbjct: 526 VSSLLVTMVVKISTEDHMPGWIPRNLNKGHLD 557
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.314 0.132 0.390
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,554,027
Number of Sequences: 28952
Number of extensions: 231338
Number of successful extensions: 467
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 456
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 467
length of database: 12,070,560
effective HSP length: 76
effective length of database: 9,870,208
effective search space used: 987020800
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.9 bits)
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