Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-0982
         (747 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF236856-1|AAG17563.2|  370|Tribolium castaneum Kruppel protein ...    23   3.4  
AM292383-1|CAL23195.2|  320|Tribolium castaneum gustatory recept...    22   6.0  
AM292358-1|CAL23170.2|  331|Tribolium castaneum gustatory recept...    22   6.0  
AM292353-1|CAL23165.2|  651|Tribolium castaneum gustatory recept...    22   6.0  
AJ829922-1|CAH25640.1|  193|Tribolium castaneum twist bHLH trans...    22   6.0  
S73230-1|AAB30812.1|   35|Tribolium castaneum twist protein.           21   7.9  

>AF236856-1|AAG17563.2|  370|Tribolium castaneum Kruppel protein
           protein.
          Length = 370

 Score = 22.6 bits (46), Expect = 3.4
 Identities = 11/26 (42%), Positives = 18/26 (69%), Gaps = 1/26 (3%)
 Frame = +1

Query: 1   RKT-NIEKSNPRPETIVSNLLQDSSK 75
           RKT  +E+ +P P + VS  ++DSS+
Sbjct: 106 RKTWKVEEDSPSPTSSVSPEVKDSSR 131


>AM292383-1|CAL23195.2|  320|Tribolium castaneum gustatory receptor
           candidate 62 protein.
          Length = 320

 Score = 21.8 bits (44), Expect = 6.0
 Identities = 8/13 (61%), Positives = 10/13 (76%)
 Frame = +1

Query: 19  KSNPRPETIVSNL 57
           KS P P TI+SN+
Sbjct: 224 KSRPSPATIISNV 236


>AM292358-1|CAL23170.2|  331|Tribolium castaneum gustatory receptor
           candidate 37 protein.
          Length = 331

 Score = 21.8 bits (44), Expect = 6.0
 Identities = 8/13 (61%), Positives = 10/13 (76%)
 Frame = +1

Query: 19  KSNPRPETIVSNL 57
           KS P P TI+SN+
Sbjct: 224 KSRPSPATIISNV 236


>AM292353-1|CAL23165.2|  651|Tribolium castaneum gustatory receptor
           candidate 32 protein.
          Length = 651

 Score = 21.8 bits (44), Expect = 6.0
 Identities = 8/13 (61%), Positives = 10/13 (76%)
 Frame = +1

Query: 19  KSNPRPETIVSNL 57
           KS P P TI+SN+
Sbjct: 544 KSRPSPATIISNV 556


>AJ829922-1|CAH25640.1|  193|Tribolium castaneum twist bHLH
           transcription factor protein.
          Length = 193

 Score = 21.8 bits (44), Expect = 6.0
 Identities = 9/18 (50%), Positives = 12/18 (66%)
 Frame = -3

Query: 745 IVNERTSERTQTLNERLA 692
           + N R  +RTQ+LNE  A
Sbjct: 100 MANVRERQRTQSLNEAFA 117


>S73230-1|AAB30812.1|   35|Tribolium castaneum twist protein.
          Length = 35

 Score = 21.4 bits (43), Expect = 7.9
 Identities = 9/16 (56%), Positives = 11/16 (68%)
 Frame = -3

Query: 739 NERTSERTQTLNERLA 692
           N R  +RTQ+LNE  A
Sbjct: 2   NVRERQRTQSLNEAFA 17


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 155,948
Number of Sequences: 336
Number of extensions: 3116
Number of successful extensions: 9
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 19923648
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)