Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-0981
(748 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AB065580-1|BAC05810.1| 346|Homo sapiens seven transmembrane hel... 33 1.1
AF034187-1|AAD50529.1| 122|Homo sapiens Ndr Ser/Thr kinase-like... 31 5.8
BX928748-1|CAH74051.1| 5635|Homo sapiens protein ( Human DNA seq... 30 7.7
AL391824-1|CAI17865.1| 5635|Homo sapiens protein ( Human DNA seq... 30 7.7
AL135797-1|CAI17871.1| 5635|Homo sapiens protein ( Human DNA seq... 30 7.7
AL135796-1|CAI17854.1| 5635|Homo sapiens protein ( Human DNA seq... 30 7.7
AL133553-2|CAI17858.1| 5635|Homo sapiens protein ( Human DNA seq... 30 7.7
AL133515-1|CAI17853.1| 5635|Homo sapiens protein ( Human DNA seq... 30 7.7
AL121996-1|CAI17844.1| 5635|Homo sapiens protein ( Human DNA seq... 30 7.7
AL118512-1|CAI17864.1| 5635|Homo sapiens protein ( Human DNA seq... 30 7.7
AJ306906-1|CAC37630.1| 2673|Homo sapiens fibulin-6 protein. 30 7.7
AF156100-1|AAK68690.1| 5636|Homo sapiens hemicentin protein. 30 7.7
>AB065580-1|BAC05810.1| 346|Homo sapiens seven transmembrane helix
receptor protein.
Length = 346
Score = 33.1 bits (72), Expect = 1.1
Identities = 12/27 (44%), Positives = 16/27 (59%)
Frame = -1
Query: 166 SILIIIYACVCVCVSNTWYCVSCFFYC 86
SI + +Y C+CVCVS Y C + C
Sbjct: 66 SISVCVYLCLCVCVSVCVYVSVCMYLC 92
Score = 31.5 bits (68), Expect = 3.3
Identities = 15/35 (42%), Positives = 20/35 (57%), Gaps = 4/35 (11%)
Frame = -1
Query: 166 SILIIIYACVCVCVS-NTWYCVS---CFFYCFNVF 74
S+ + +Y CVC+CVS CVS C C +VF
Sbjct: 14 SVCLYLYVCVCICVSVCVCICVSVCVCICVCVSVF 48
>AF034187-1|AAD50529.1| 122|Homo sapiens Ndr Ser/Thr kinase-like
protein protein.
Length = 122
Score = 30.7 bits (66), Expect = 5.8
Identities = 10/21 (47%), Positives = 13/21 (61%)
Frame = -1
Query: 157 IIIYACVCVCVSNTWYCVSCF 95
++ CVCVCV W C+S F
Sbjct: 16 LVCCVCVCVCVCVWWLCISLF 36
>BX928748-1|CAH74051.1| 5635|Homo sapiens protein ( Human DNA sequence
from clone RP11-465I11 on chromosome 1 Contains part of
the gene for hemicentin (FIBL-6). ).
Length = 5635
Score = 30.3 bits (65), Expect = 7.7
Identities = 23/59 (38%), Positives = 30/59 (50%), Gaps = 1/59 (1%)
Frame = -3
Query: 434 SRPGHAISWRHPWRVHWTYSN*DLWCFLSVLTCPSSYE-VCRDLSSRLLARTPSITDVH 261
SR GH+ISW RV+ SN L+ + S +E V R+L +L R P I VH
Sbjct: 4474 SRQGHSISWDD--RVN-VLSNNSLYIADAQKEDTSEFECVARNLMGSVLVRVPVIVQVH 4529
>AL391824-1|CAI17865.1| 5635|Homo sapiens protein ( Human DNA sequence
from clone GS1-268N14 on chromosome 1 Contains part of
the gene for hemicentin. ).
Length = 5635
Score = 30.3 bits (65), Expect = 7.7
Identities = 23/59 (38%), Positives = 30/59 (50%), Gaps = 1/59 (1%)
Frame = -3
Query: 434 SRPGHAISWRHPWRVHWTYSN*DLWCFLSVLTCPSSYE-VCRDLSSRLLARTPSITDVH 261
SR GH+ISW RV+ SN L+ + S +E V R+L +L R P I VH
Sbjct: 4474 SRQGHSISWDD--RVN-VLSNNSLYIADAQKEDTSEFECVARNLMGSVLVRVPVIVQVH 4529
>AL135797-1|CAI17871.1| 5635|Homo sapiens protein ( Human DNA sequence
from clone GS1-77J13 on chromosome 1 Contains part of
the gene for hemicentin. ).
Length = 5635
Score = 30.3 bits (65), Expect = 7.7
Identities = 23/59 (38%), Positives = 30/59 (50%), Gaps = 1/59 (1%)
Frame = -3
Query: 434 SRPGHAISWRHPWRVHWTYSN*DLWCFLSVLTCPSSYE-VCRDLSSRLLARTPSITDVH 261
SR GH+ISW RV+ SN L+ + S +E V R+L +L R P I VH
Sbjct: 4474 SRQGHSISWDD--RVN-VLSNNSLYIADAQKEDTSEFECVARNLMGSVLVRVPVIVQVH 4529
>AL135796-1|CAI17854.1| 5635|Homo sapiens protein ( Human DNA sequence
from clone GS1-164L12 on chromosome 1 Contains part of
the gene for hemicentin. ).
Length = 5635
Score = 30.3 bits (65), Expect = 7.7
Identities = 23/59 (38%), Positives = 30/59 (50%), Gaps = 1/59 (1%)
Frame = -3
Query: 434 SRPGHAISWRHPWRVHWTYSN*DLWCFLSVLTCPSSYE-VCRDLSSRLLARTPSITDVH 261
SR GH+ISW RV+ SN L+ + S +E V R+L +L R P I VH
Sbjct: 4474 SRQGHSISWDD--RVN-VLSNNSLYIADAQKEDTSEFECVARNLMGSVLVRVPVIVQVH 4529
>AL133553-2|CAI17858.1| 5635|Homo sapiens protein ( Human DNA sequence
from clone GS1-174L6 on chromosome 1 Contains the3' end
of the gene for hemicentin, the PRG4 gene for
proteoglycan 4 ).
Length = 5635
Score = 30.3 bits (65), Expect = 7.7
Identities = 23/59 (38%), Positives = 30/59 (50%), Gaps = 1/59 (1%)
Frame = -3
Query: 434 SRPGHAISWRHPWRVHWTYSN*DLWCFLSVLTCPSSYE-VCRDLSSRLLARTPSITDVH 261
SR GH+ISW RV+ SN L+ + S +E V R+L +L R P I VH
Sbjct: 4474 SRQGHSISWDD--RVN-VLSNNSLYIADAQKEDTSEFECVARNLMGSVLVRVPVIVQVH 4529
>AL133515-1|CAI17853.1| 5635|Homo sapiens protein ( Human DNA sequence
from clone GS1-153O3 on chromosome 1 Contains part of
the gene for hemicentin. ).
Length = 5635
Score = 30.3 bits (65), Expect = 7.7
Identities = 23/59 (38%), Positives = 30/59 (50%), Gaps = 1/59 (1%)
Frame = -3
Query: 434 SRPGHAISWRHPWRVHWTYSN*DLWCFLSVLTCPSSYE-VCRDLSSRLLARTPSITDVH 261
SR GH+ISW RV+ SN L+ + S +E V R+L +L R P I VH
Sbjct: 4474 SRQGHSISWDD--RVN-VLSNNSLYIADAQKEDTSEFECVARNLMGSVLVRVPVIVQVH 4529
>AL121996-1|CAI17844.1| 5635|Homo sapiens protein ( Human DNA sequence
from clone GS1-118G19 on chromosome 1q25.1-31.1 Contains
the 5' end of the gene for hemicentin. ).
Length = 5635
Score = 30.3 bits (65), Expect = 7.7
Identities = 23/59 (38%), Positives = 30/59 (50%), Gaps = 1/59 (1%)
Frame = -3
Query: 434 SRPGHAISWRHPWRVHWTYSN*DLWCFLSVLTCPSSYE-VCRDLSSRLLARTPSITDVH 261
SR GH+ISW RV+ SN L+ + S +E V R+L +L R P I VH
Sbjct: 4474 SRQGHSISWDD--RVN-VLSNNSLYIADAQKEDTSEFECVARNLMGSVLVRVPVIVQVH 4529
>AL118512-1|CAI17864.1| 5635|Homo sapiens protein ( Human DNA sequence
from clone GS1-248A21 on chromosome 1q31.1-31.3 Contains
part of the gene for hemicentin (FIBL-6). ).
Length = 5635
Score = 30.3 bits (65), Expect = 7.7
Identities = 23/59 (38%), Positives = 30/59 (50%), Gaps = 1/59 (1%)
Frame = -3
Query: 434 SRPGHAISWRHPWRVHWTYSN*DLWCFLSVLTCPSSYE-VCRDLSSRLLARTPSITDVH 261
SR GH+ISW RV+ SN L+ + S +E V R+L +L R P I VH
Sbjct: 4474 SRQGHSISWDD--RVN-VLSNNSLYIADAQKEDTSEFECVARNLMGSVLVRVPVIVQVH 4529
>AJ306906-1|CAC37630.1| 2673|Homo sapiens fibulin-6 protein.
Length = 2673
Score = 30.3 bits (65), Expect = 7.7
Identities = 23/59 (38%), Positives = 30/59 (50%), Gaps = 1/59 (1%)
Frame = -3
Query: 434 SRPGHAISWRHPWRVHWTYSN*DLWCFLSVLTCPSSYE-VCRDLSSRLLARTPSITDVH 261
SR GH+ISW RV+ SN L+ + S +E V R+L +L R P I VH
Sbjct: 1512 SRQGHSISWDD--RVN-VLSNNSLYIADAQKEDTSEFECVARNLMGSVLVRVPVIVQVH 1567
>AF156100-1|AAK68690.1| 5636|Homo sapiens hemicentin protein.
Length = 5636
Score = 30.3 bits (65), Expect = 7.7
Identities = 23/59 (38%), Positives = 30/59 (50%), Gaps = 1/59 (1%)
Frame = -3
Query: 434 SRPGHAISWRHPWRVHWTYSN*DLWCFLSVLTCPSSYE-VCRDLSSRLLARTPSITDVH 261
SR GH+ISW RV+ SN L+ + S +E V R+L +L R P I VH
Sbjct: 4475 SRQGHSISWDD--RVN-VLSNNSLYIADAQKEDTSEFECVARNLMGSVLVRVPVIVQVH 4530
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 103,354,816
Number of Sequences: 237096
Number of extensions: 2079435
Number of successful extensions: 4686
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 4395
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4628
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8959138240
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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