Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-0981
         (748 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z82078-7|CAB04947.3|  801|Caenorhabditis elegans Hypothetical pr...    31   0.87 
AF497514-1|AAM33381.1|  801|Caenorhabditis elegans heavy metal t...    31   0.87 
AF497513-1|AAM33380.1|  801|Caenorhabditis elegans heavy metal t...    31   0.87 
AF490977-1|AAQ06435.1|  801|Caenorhabditis elegans ABC6 protein ...    31   0.87 
AL117204-10|CAB55125.1|  196|Caenorhabditis elegans Hypothetical...    29   2.6  
AF016675-5|AAB66134.1|  476|Caenorhabditis elegans Hypothetical ...    28   6.1  
U53155-9|AAC48273.1|  328|Caenorhabditis elegans Seven tm recept...    28   8.1  
U40941-4|AAA81709.1|  771|Caenorhabditis elegans Hypothetical pr...    28   8.1  
U40941-3|AAM51502.1|  730|Caenorhabditis elegans Hypothetical pr...    28   8.1  

>Z82078-7|CAB04947.3|  801|Caenorhabditis elegans Hypothetical
           protein W09D6.6 protein.
          Length = 801

 Score = 31.1 bits (67), Expect = 0.87
 Identities = 13/44 (29%), Positives = 20/44 (45%)
 Frame = -1

Query: 157 IIIYACVCVCVSNTWYCVSCFFYCFNVFFRHNKKNILAFCTPTL 26
           + I   + +C      C S F++CF  +F      +LAFC   L
Sbjct: 68  LTISKILSICTIFAVICQSIFYFCFTFYFHPYTHLLLAFCVSKL 111


>AF497514-1|AAM33381.1|  801|Caenorhabditis elegans heavy metal
           tolerance factor 1 protein.
          Length = 801

 Score = 31.1 bits (67), Expect = 0.87
 Identities = 13/44 (29%), Positives = 20/44 (45%)
 Frame = -1

Query: 157 IIIYACVCVCVSNTWYCVSCFFYCFNVFFRHNKKNILAFCTPTL 26
           + I   + +C      C S F++CF  +F      +LAFC   L
Sbjct: 68  LTISKILSICTIFAVICQSIFYFCFTFYFHPYTHLLLAFCVSKL 111


>AF497513-1|AAM33380.1|  801|Caenorhabditis elegans heavy metal
           tolerance factor 1 protein.
          Length = 801

 Score = 31.1 bits (67), Expect = 0.87
 Identities = 13/44 (29%), Positives = 20/44 (45%)
 Frame = -1

Query: 157 IIIYACVCVCVSNTWYCVSCFFYCFNVFFRHNKKNILAFCTPTL 26
           + I   + +C      C S F++CF  +F      +LAFC   L
Sbjct: 68  LTISKILSICTIFAVICQSIFYFCFTFYFHPYTHLLLAFCVSKL 111


>AF490977-1|AAQ06435.1|  801|Caenorhabditis elegans ABC6 protein
           protein.
          Length = 801

 Score = 31.1 bits (67), Expect = 0.87
 Identities = 13/44 (29%), Positives = 20/44 (45%)
 Frame = -1

Query: 157 IIIYACVCVCVSNTWYCVSCFFYCFNVFFRHNKKNILAFCTPTL 26
           + I   + +C      C S F++CF  +F      +LAFC   L
Sbjct: 68  LTISKILSICTIFAVICQSIFYFCFTFYFHPYTHLLLAFCVSKL 111


>AL117204-10|CAB55125.1|  196|Caenorhabditis elegans Hypothetical
           protein Y116A8C.19 protein.
          Length = 196

 Score = 29.5 bits (63), Expect = 2.6
 Identities = 17/49 (34%), Positives = 24/49 (48%)
 Frame = +1

Query: 268 SVMLGVRASSLLLRSLQTSYEEGHVRTLRKHHKS*LEYVQCTLHGCLHE 414
           +V + +   SL L S   SY+      L K HKS  +Y  CT+   LH+
Sbjct: 25  TVPINIAPQSLSLSSSPGSYDGDQFSPLMKQHKS-RKYDSCTISDDLHD 72


>AF016675-5|AAB66134.1|  476|Caenorhabditis elegans Hypothetical
           protein T27B7.2 protein.
          Length = 476

 Score = 28.3 bits (60), Expect = 6.1
 Identities = 11/24 (45%), Positives = 17/24 (70%)
 Frame = +1

Query: 574 RLFHPSRMFPGDSSRLSFSPDLFS 645
           R+FHP+  FP D+ + +F P +FS
Sbjct: 436 RIFHPNMFFP-DNLKFAFPPKVFS 458


>U53155-9|AAC48273.1|  328|Caenorhabditis elegans Seven tm receptor
           protein 138 protein.
          Length = 328

 Score = 27.9 bits (59), Expect = 8.1
 Identities = 12/30 (40%), Positives = 17/30 (56%)
 Frame = +2

Query: 506 FIWVEEVTGVLQHKAEILTVLFNGYFILHA 595
           F WVE ++  L H    L +L NG F+ H+
Sbjct: 51  FTWVEMMSLPLMHGYRSLFILMNGSFLRHS 80


>U40941-4|AAA81709.1|  771|Caenorhabditis elegans Hypothetical
           protein F35C8.7a protein.
          Length = 771

 Score = 27.9 bits (59), Expect = 8.1
 Identities = 10/23 (43%), Positives = 14/23 (60%), Gaps = 2/23 (8%)
 Frame = -1

Query: 115 WY--CVSCFFYCFNVFFRHNKKN 53
           W+  C+ C F+C  VFF+   KN
Sbjct: 603 WFLMCLKCCFWCLEVFFKFLTKN 625


>U40941-3|AAM51502.1|  730|Caenorhabditis elegans Hypothetical
           protein F35C8.7b protein.
          Length = 730

 Score = 27.9 bits (59), Expect = 8.1
 Identities = 10/23 (43%), Positives = 14/23 (60%), Gaps = 2/23 (8%)
 Frame = -1

Query: 115 WY--CVSCFFYCFNVFFRHNKKN 53
           W+  C+ C F+C  VFF+   KN
Sbjct: 562 WFLMCLKCCFWCLEVFFKFLTKN 584


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,189,140
Number of Sequences: 27780
Number of extensions: 319197
Number of successful extensions: 808
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 785
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 808
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1766990064
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)