Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-0979
(677 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC22H10.07 |scd2|ral3|scaffold protein Scd2|Schizosaccharomyce... 29 0.82
SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual 27 1.9
SPBC839.07 |ibp1||itty bitty phosphatase Ibp1|Schizosaccharomyce... 27 2.5
SPAC1F5.04c |cdc12||formin Cdc12|Schizosaccharomyces pombe|chr 1... 27 2.5
SPBC1289.10c |||transcription factor |Schizosaccharomyces pombe|... 27 3.3
SPBC947.10 |||ubiquitin-protein ligase E3 |Schizosaccharomyces p... 27 3.3
SPAC9.09 |met26||homocysteine methyltransferase|Schizosaccharomy... 27 3.3
SPAC1751.01c |gti1||gluconate transporter inducer Gti1|Schizosac... 26 5.8
SPAC29B12.02c |set2||histone lysine methyltransferase Set2 |Schi... 26 5.8
SPAC1687.09 |||conserved fungal protein|Schizosaccharomyces pomb... 26 5.8
SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr 1... 26 5.8
SPAPB18E9.04c |||sequence orphan|Schizosaccharomyces pombe|chr 1... 26 5.8
SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family ... 25 7.6
SPAP32A8.03c |||ubiquitin-protein ligase E3 |Schizosaccharomyces... 25 7.6
SPAC15A10.11 |ubr11||N-end-recognizing protein |Schizosaccharomy... 25 7.6
SPCC70.08c |||methyltransferase |Schizosaccharomyces pombe|chr 3... 25 7.6
SPCC594.02c |||conserved fungal protein|Schizosaccharomyces pomb... 25 7.6
SPCC736.14 |dis1||microtubule-associated protein Dis1 |Schizosac... 25 7.6
>SPAC22H10.07 |scd2|ral3|scaffold protein Scd2|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 536
Score = 28.7 bits (61), Expect = 0.82
Identities = 12/38 (31%), Positives = 23/38 (60%), Gaps = 4/38 (10%)
Frame = -3
Query: 345 PAKSFPFTFSKRSPMR----SLPERAATPPGTTCEIKI 244
P + F+ +++P + S+PE A T G+TC++K+
Sbjct: 427 PREPLSFSLPEKAPEKATNISIPESAPTTAGSTCKVKV 464
>SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1611
Score = 27.5 bits (58), Expect = 1.9
Identities = 14/36 (38%), Positives = 19/36 (52%)
Frame = +2
Query: 5 LPPQPAPRKLSQTNGQAPTTKPSTNSTNAPLTAGAP 112
+PP PAP +G P KPS + P+ +GAP
Sbjct: 1111 VPPVPAP------SGAPPVPKPSVAAPPVPVPSGAP 1140
>SPBC839.07 |ibp1||itty bitty phosphatase Ibp1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 138
Score = 27.1 bits (57), Expect = 2.5
Identities = 12/31 (38%), Positives = 19/31 (61%)
Frame = -2
Query: 559 DF*YENSLIVGIVRVATLSFKATLDMHTEFL 467
D+ YE I G VR+ + +F A++D H + L
Sbjct: 30 DYDYEGERIPGSVRIPSDTFLASVDQHVDDL 60
>SPAC1F5.04c |cdc12||formin Cdc12|Schizosaccharomyces pombe|chr
1|||Manual
Length = 1841
Score = 27.1 bits (57), Expect = 2.5
Identities = 10/45 (22%), Positives = 23/45 (51%)
Frame = +2
Query: 431 GYQELTIIKQEGEKLGMHIKGGLKGQRGNPNDPNDEGVFISKVNS 565
G +++ +K+ + + ++ PNDPN + +F +V+S
Sbjct: 1316 GTKKMDFLKEHLRTMNTTLNNAMRYFGEQPNDPNSKNLFFKRVDS 1360
>SPBC1289.10c |||transcription factor |Schizosaccharomyces pombe|chr
2|||Manual
Length = 743
Score = 26.6 bits (56), Expect = 3.3
Identities = 16/52 (30%), Positives = 22/52 (42%)
Frame = +2
Query: 26 RKLSQTNGQAPTTKPSTNSTNAPLTAGAPQASTDDVFEDIQDVTLLKEGGSL 181
+K S N APT P+ N+TN P ++ S E Q + K L
Sbjct: 610 QKPSSANSNAPTPAPTVNTTN-PESSTNEATSVGPALEPSQGANVHKSDSEL 660
>SPBC947.10 |||ubiquitin-protein ligase E3 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 676
Score = 26.6 bits (56), Expect = 3.3
Identities = 12/40 (30%), Positives = 22/40 (55%)
Frame = +2
Query: 11 PQPAPRKLSQTNGQAPTTKPSTNSTNAPLTAGAPQASTDD 130
P PAPR ++ + T + + ++ N+P AP A+ D+
Sbjct: 399 PPPAPRPVTNNSSNNNTNQSNASNENSP---NAPSAANDN 435
>SPAC9.09 |met26||homocysteine methyltransferase|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 764
Score = 26.6 bits (56), Expect = 3.3
Identities = 14/46 (30%), Positives = 23/46 (50%), Gaps = 1/46 (2%)
Frame = +2
Query: 14 QPAPRKLSQTN-GQAPTTKPSTNSTNAPLTAGAPQASTDDVFEDIQ 148
+PAP + ++ Q+ T+KP AP+T DDV + +Q
Sbjct: 539 RPAPMTVKESQYAQSITSKPMKGMLTAPITILRWSFPRDDVHDSVQ 584
>SPAC1751.01c |gti1||gluconate transporter inducer
Gti1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 720
Score = 25.8 bits (54), Expect = 5.8
Identities = 25/83 (30%), Positives = 38/83 (45%), Gaps = 2/83 (2%)
Frame = -3
Query: 348 TPAKSFPFTFSKRSPMRSLPERAATPPGTTCEIKIPGSFPPNGTH--E*SVPPMILKPRD 175
T + +FP +FS SLP ++ P GT K P S P+ T+ S + PR
Sbjct: 184 TTSAAFPSSFS------SLPLVSSKPTGTPFVPKSPPSSSPSTTNVSNASTSSAPINPRA 237
Query: 174 PPSFKRVTSCMSSNTSSVEACGA 106
P + + S+TSS+ C +
Sbjct: 238 PQTRRE----SISSTSSIHYCSS 256
>SPAC29B12.02c |set2||histone lysine methyltransferase Set2
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 798
Score = 25.8 bits (54), Expect = 5.8
Identities = 12/30 (40%), Positives = 15/30 (50%)
Frame = +2
Query: 26 RKLSQTNGQAPTTKPSTNSTNAPLTAGAPQ 115
RK Q Q+ +PS N +N PL PQ
Sbjct: 501 RKPGQVAPQSTNAEPSNNQSNPPLRDQEPQ 530
>SPAC1687.09 |||conserved fungal protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1379
Score = 25.8 bits (54), Expect = 5.8
Identities = 20/54 (37%), Positives = 26/54 (48%), Gaps = 5/54 (9%)
Frame = -3
Query: 318 SKRSPM----RSLPERAATPPGTTCEIKIP-GSFPPNGTHE*SVPPMILKPRDP 172
SKR P+ R+L RA +P + + GSFP H S+P I K DP
Sbjct: 12 SKRHPLLHSERNLSRRAVSPSISRSFFQHSNGSFPLFQNHRKSLPSAIYKSVDP 65
>SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr
1|||Manual
Length = 574
Score = 25.8 bits (54), Expect = 5.8
Identities = 18/59 (30%), Positives = 25/59 (42%), Gaps = 3/59 (5%)
Frame = -3
Query: 315 KRSPMRSLPERAATPPGTTCEIKIPGSFPPNGTHE*SVPPMI---LKPRDPPSFKRVTS 148
+R P S P PP + + P + PP S+ P I KP PP RV++
Sbjct: 243 ERVPSLSAPAPPPIPPPSNGTVSSPPNSPPRPIAPVSMNPAINSTSKPPLPPPSSRVSA 301
>SPAPB18E9.04c |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 800
Score = 25.8 bits (54), Expect = 5.8
Identities = 16/55 (29%), Positives = 20/55 (36%)
Frame = -3
Query: 432 PIGSGS*RTVSDSVAPGCSRSCTASRCVTPAKSFPFTFSKRSPMRSLPERAATPP 268
P S S S S P S SCT S + P + + P S + PP
Sbjct: 318 PPASTSSTGTSSSPLPSTSTSCTTSTSIPPTGNSTTPVTPTVPPTSTSSTSTPPP 372
>SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1420
Score = 25.4 bits (53), Expect = 7.6
Identities = 19/75 (25%), Positives = 31/75 (41%)
Frame = -3
Query: 348 TPAKSFPFTFSKRSPMRSLPERAATPPGTTCEIKIPGSFPPNGTHE*SVPPMILKPRDPP 169
TP ++ P P +LP ++ T ++ +P N + ++PP P PP
Sbjct: 228 TPKQADPLPAPPPPPPPTLPPQSTN----TSQLPMPSRNVNNLGSQVNIPPPPATPSQPP 283
Query: 168 SFKRVTSCMSSNTSS 124
S S+ TSS
Sbjct: 284 RPPTNASTRSTGTSS 298
>SPAP32A8.03c |||ubiquitin-protein ligase E3 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 513
Score = 25.4 bits (53), Expect = 7.6
Identities = 9/21 (42%), Positives = 12/21 (57%)
Frame = +2
Query: 8 PPQPAPRKLSQTNGQAPTTKP 70
PP P PR T+G++ T P
Sbjct: 240 PPPPPPRPSQPTSGESQNTNP 260
>SPAC15A10.11 |ubr11||N-end-recognizing protein |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 2052
Score = 25.4 bits (53), Expect = 7.6
Identities = 18/58 (31%), Positives = 25/58 (43%), Gaps = 4/58 (6%)
Frame = +2
Query: 47 GQAPTTKPSTNSTNAPLTAGAPQASTDDVF--EDIQDV--TLLKEGGSLGFSIIGGTD 208
G KP N N PL S DD++ E++ DV L E G + +GG +
Sbjct: 364 GLEKPAKPEVNFNNLPLEIVNDDDSEDDIYAAEELLDVIANLQDETGVTRIANLGGDE 421
>SPCC70.08c |||methyltransferase |Schizosaccharomyces pombe|chr
3|||Manual
Length = 260
Score = 25.4 bits (53), Expect = 7.6
Identities = 11/27 (40%), Positives = 16/27 (59%), Gaps = 1/27 (3%)
Frame = -2
Query: 274 SSRHDV*DKNPWFLSSE-RYTRMIGAA 197
+++ + NPWF SE YTRM+ A
Sbjct: 159 ATKEQIDQANPWFFGSEDDYTRMLEEA 185
>SPCC594.02c |||conserved fungal protein|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 489
Score = 25.4 bits (53), Expect = 7.6
Identities = 17/55 (30%), Positives = 25/55 (45%)
Frame = +2
Query: 8 PPQPAPRKLSQTNGQAPTTKPSTNSTNAPLTAGAPQASTDDVFEDIQDVTLLKEG 172
P PAP L + AP TN+ +PL AP+ + D D T +++G
Sbjct: 305 PVTPAP--LEKPVNLAPEVVEPTNAAASPLQLNAPKLTDVDDSALAYDPTKVQDG 357
>SPCC736.14 |dis1||microtubule-associated protein Dis1
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 882
Score = 25.4 bits (53), Expect = 7.6
Identities = 14/31 (45%), Positives = 20/31 (64%)
Frame = +2
Query: 8 PPQPAPRKLSQTNGQAPTTKPSTNSTNAPLT 100
P + +P KL+ T QAP+ PS+N + A LT
Sbjct: 552 PLKTSPVKLAVTP-QAPSPLPSSNPSQASLT 581
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,527,950
Number of Sequences: 5004
Number of extensions: 49453
Number of successful extensions: 173
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 152
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 172
length of database: 2,362,478
effective HSP length: 70
effective length of database: 2,012,198
effective search space used: 311890690
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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