Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-0979
(677 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AB183889-1|BAD86829.1| 316|Apis mellifera Mos protein. 25 0.88
AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein. 25 0.88
DQ667186-1|ABG75738.1| 447|Apis mellifera glutamate-gated chlor... 23 2.7
DQ667185-1|ABG75737.1| 447|Apis mellifera glutamate-gated chlor... 23 2.7
EF117814-1|ABO38437.1| 570|Apis mellifera cryptochrome 2 protein. 23 3.5
AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein. 23 3.5
AB267886-1|BAF46356.1| 567|Apis mellifera ecdysteroid receptor ... 22 6.2
EF625898-1|ABR45905.1| 686|Apis mellifera hexamerin protein. 21 8.2
EF589162-1|ABQ84439.1| 686|Apis mellifera hexamerin 70c protein. 21 8.2
AF004169-1|AAC13418.1| 371|Apis mellifera ultraviolet-sensitive... 21 8.2
>AB183889-1|BAD86829.1| 316|Apis mellifera Mos protein.
Length = 316
Score = 24.6 bits (51), Expect = 0.88
Identities = 16/61 (26%), Positives = 27/61 (44%)
Frame = +3
Query: 135 SKTYRMSLS*RKADPLVSVSSAAPIIRVYRSEERNQGFLSHTSCREESRRAQASSAWVIV 314
+K YR+S K D + +S PI VY++ + LS + +R+ + I
Sbjct: 9 NKFYRISPQILKNDKRIYLSPRTPIKNVYKNNIETKNQLSPFNIDTPNRQKILKDGFPIK 68
Query: 315 C 317
C
Sbjct: 69 C 69
>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
Length = 1598
Score = 24.6 bits (51), Expect = 0.88
Identities = 13/32 (40%), Positives = 15/32 (46%)
Frame = +2
Query: 8 PPQPAPRKLSQTNGQAPTTKPSTNSTNAPLTA 103
PPQPA + Q QA KP + N P A
Sbjct: 999 PPQPANAQQGQAQAQA---KPQSQEANKPKPA 1027
>DQ667186-1|ABG75738.1| 447|Apis mellifera glutamate-gated chloride
channel protein.
Length = 447
Score = 23.0 bits (47), Expect = 2.7
Identities = 15/63 (23%), Positives = 27/63 (42%), Gaps = 4/63 (6%)
Frame = -3
Query: 321 FSKRSPMRSLPERAATPPGTT---CEIKIPGS-FPPNGTHE*SVPPMILKPRDPPSFKRV 154
++ RS M S PP T + +P P+ + ++ P++ +P D S R+
Sbjct: 327 YASRSDMHSDNIEKKYPPSETEQSTSMDLPSDQVEPDNSSNFAMKPLVRQPEDTMSVDRM 386
Query: 153 TSC 145
C
Sbjct: 387 QHC 389
>DQ667185-1|ABG75737.1| 447|Apis mellifera glutamate-gated chloride
channel protein.
Length = 447
Score = 23.0 bits (47), Expect = 2.7
Identities = 15/63 (23%), Positives = 27/63 (42%), Gaps = 4/63 (6%)
Frame = -3
Query: 321 FSKRSPMRSLPERAATPPGTT---CEIKIPGS-FPPNGTHE*SVPPMILKPRDPPSFKRV 154
++ RS M S PP T + +P P+ + ++ P++ +P D S R+
Sbjct: 327 YASRSDMHSDNIEKKYPPSETEQSTSMDLPSDQVEPDNSSNFAMKPLVRQPEDTMSVDRM 386
Query: 153 TSC 145
C
Sbjct: 387 QHC 389
>EF117814-1|ABO38437.1| 570|Apis mellifera cryptochrome 2 protein.
Length = 570
Score = 22.6 bits (46), Expect = 3.5
Identities = 10/25 (40%), Positives = 13/25 (52%)
Frame = +2
Query: 359 DAVQLLLQPGATLSLTVRHDPLPIG 433
DA+ L + T +LT DP P G
Sbjct: 100 DALPKLFKEWGTTNLTFEEDPEPFG 124
>AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.
Length = 1946
Score = 22.6 bits (46), Expect = 3.5
Identities = 10/28 (35%), Positives = 12/28 (42%)
Frame = +2
Query: 8 PPQPAPRKLSQTNGQAPTTKPSTNSTNA 91
PP P PR Q N +K S + A
Sbjct: 1859 PPPPPPRNHDQNNSSFNDSKESNEISEA 1886
>AB267886-1|BAF46356.1| 567|Apis mellifera ecdysteroid receptor A
isoform protein.
Length = 567
Score = 21.8 bits (44), Expect = 6.2
Identities = 13/37 (35%), Positives = 14/37 (37%)
Frame = +2
Query: 218 VPFGGKEPGIFISHVVPGGVAARSGKLRMGDRLLKVN 328
VP G G + PG AA G R D L N
Sbjct: 57 VPVGSAVAGTAGGALFPGMAAAGKGAARSDDWLANAN 93
>EF625898-1|ABR45905.1| 686|Apis mellifera hexamerin protein.
Length = 686
Score = 21.4 bits (43), Expect = 8.2
Identities = 9/20 (45%), Positives = 12/20 (60%)
Frame = -2
Query: 235 LSSERYTRMIGAADDTETKG 176
++ ER+T I D ETKG
Sbjct: 496 MNYERFTYKININSDKETKG 515
>EF589162-1|ABQ84439.1| 686|Apis mellifera hexamerin 70c protein.
Length = 686
Score = 21.4 bits (43), Expect = 8.2
Identities = 9/20 (45%), Positives = 12/20 (60%)
Frame = -2
Query: 235 LSSERYTRMIGAADDTETKG 176
++ ER+T I D ETKG
Sbjct: 496 MNYERFTYKININSDKETKG 515
>AF004169-1|AAC13418.1| 371|Apis mellifera ultraviolet-sensitive
opsin protein.
Length = 371
Score = 21.4 bits (43), Expect = 8.2
Identities = 23/82 (28%), Positives = 33/82 (40%), Gaps = 15/82 (18%)
Frame = -3
Query: 459 CFMIVNSWYP---------IGSGS*RTVSDSVAPGCSRSCTASRCVTP---AKSFP---F 325
CF+ V SW P G+ + T ++ P C +C A C+ P A S P
Sbjct: 280 CFLYVLSWTPYGVMSMIGAFGNKALLTPGVTMIPAC--TCKAVACLDPYVYAISHPKYRL 337
Query: 324 TFSKRSPMRSLPERAATPPGTT 259
KR P L E+ + +T
Sbjct: 338 ELQKRLPWLELQEKPISDSTST 359
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 173,750
Number of Sequences: 438
Number of extensions: 3796
Number of successful extensions: 13
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 20586735
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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