Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-0979
(677 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At1g62760.1 68414.m07083 invertase/pectin methylesterase inhibit... 35 0.043
At1g55480.1 68414.m06346 expressed protein 34 0.075
At4g17740.2 68417.m02649 C-terminal processing protease, putativ... 34 0.099
At4g17740.1 68417.m02648 C-terminal processing protease, putativ... 34 0.099
At1g19390.1 68414.m02412 wall-associated kinase, putative simila... 33 0.13
At1g30835.1 68414.m03770 expressed protein 31 0.53
At5g46390.2 68418.m05710 peptidase S41 family protein similar to... 30 1.2
At5g46390.1 68418.m05709 peptidase S41 family protein similar to... 30 1.2
At2g14890.2 68415.m01692 arabinogalactan-protein (AGP9) identica... 30 1.2
At2g14890.1 68415.m01693 arabinogalactan-protein (AGP9) identica... 30 1.2
At1g50200.1 68414.m05629 aminoacyl-tRNA synthetase family protei... 30 1.2
At3g11150.1 68416.m01351 expressed protein 29 2.1
At1g69220.2 68414.m07926 serine/threonine protein kinase, putati... 29 2.1
At1g69220.1 68414.m07925 serine/threonine protein kinase, putati... 29 2.1
At5g14920.1 68418.m01750 gibberellin-regulated family protein si... 29 2.8
At3g24550.1 68416.m03083 protein kinase family protein contains ... 29 2.8
At3g50580.1 68416.m05532 proline-rich family protein contains pr... 28 4.9
At4g23300.1 68417.m03358 protein kinase family protein contains ... 28 6.5
At2g33170.1 68415.m04064 leucine-rich repeat transmembrane prote... 28 6.5
At1g77970.1 68414.m09086 hydroxyproline-rich glycoprotein family... 28 6.5
At1g15210.1 68414.m01818 ABC transporter family protein Similar ... 28 6.5
At3g02540.2 68416.m00243 ubiquitin family protein contains Pfam ... 27 8.6
At3g02540.1 68416.m00242 ubiquitin family protein contains Pfam ... 27 8.6
At2g04050.1 68415.m00386 MATE efflux family protein similar to r... 27 8.6
>At1g62760.1 68414.m07083 invertase/pectin methylesterase inhibitor
family protein low similarity to extensin [Volvox
carteri] GI:21992
Length = 312
Score = 35.1 bits (77), Expect = 0.043
Identities = 22/66 (33%), Positives = 32/66 (48%)
Frame = -3
Query: 318 SKRSPMRSLPERAATPPGTTCEIKIPGSFPPNGTHE*SVPPMILKPRDPPSFKRVTSCMS 139
S SP S P + +PP ++ P S PP+ S PP+ L P PP +S +S
Sbjct: 25 SSLSPSSSSPSLSPSPPSSS-----PSSAPPSSLSPSSPPPLSLSPSSPPPPPPSSSPLS 79
Query: 138 SNTSSV 121
S + S+
Sbjct: 80 SLSPSL 85
Score = 33.1 bits (72), Expect = 0.17
Identities = 22/63 (34%), Positives = 32/63 (50%), Gaps = 1/63 (1%)
Frame = -3
Query: 309 SPMRSL-PERAATPPGTTCEIKIPGSFPPNGTHE*SVPPMILKPRDPPSFKRVTSCMSSN 133
SP+ SL P + +PP ++ P S PP+ S PP+ L P PP +S +SS
Sbjct: 76 SPLSSLSPSLSPSPPSSS-----PSSAPPSSLSPSSPPPLSLSPSSPPPPPPSSSPLSSL 130
Query: 132 TSS 124
+ S
Sbjct: 131 SPS 133
>At1g55480.1 68414.m06346 expressed protein
Length = 335
Score = 34.3 bits (75), Expect = 0.075
Identities = 12/30 (40%), Positives = 22/30 (73%)
Frame = +2
Query: 230 GKEPGIFISHVVPGGVAARSGKLRMGDRLL 319
G++ G +I ++PGG A ++GK +GDR++
Sbjct: 104 GRDGGTYIDAILPGGSADKTGKFTVGDRVI 133
>At4g17740.2 68417.m02649 C-terminal processing protease, putative
similar to C-terminal protease precursor [Spinacia
oleracea] GI:999435; similar to SP|Q44879| (Bartonella
bacilliformis)
Length = 505
Score = 33.9 bits (74), Expect = 0.099
Identities = 21/65 (32%), Positives = 32/65 (49%), Gaps = 1/65 (1%)
Frame = +2
Query: 230 GKEPGIFISHVVPGGVAARSGKLRMGDRLLKVNGNDLAGVTHRDAVQLLLQP-GATLSLT 406
G G+ + PGG A R+G L GD + ++ +T DA Q+L P G+ + L
Sbjct: 214 GPPAGLVVISAAPGGPANRAGIL-PGDVIQGIDNTTTETLTIYDAAQMLQGPEGSAVELA 272
Query: 407 VRHDP 421
+R P
Sbjct: 273 IRSGP 277
>At4g17740.1 68417.m02648 C-terminal processing protease, putative
similar to C-terminal protease precursor [Spinacia
oleracea] GI:999435; similar to SP|Q44879| (Bartonella
bacilliformis)
Length = 515
Score = 33.9 bits (74), Expect = 0.099
Identities = 21/65 (32%), Positives = 32/65 (49%), Gaps = 1/65 (1%)
Frame = +2
Query: 230 GKEPGIFISHVVPGGVAARSGKLRMGDRLLKVNGNDLAGVTHRDAVQLLLQP-GATLSLT 406
G G+ + PGG A R+G L GD + ++ +T DA Q+L P G+ + L
Sbjct: 224 GPPAGLVVISAAPGGPANRAGIL-PGDVIQGIDNTTTETLTIYDAAQMLQGPEGSAVELA 282
Query: 407 VRHDP 421
+R P
Sbjct: 283 IRSGP 287
>At1g19390.1 68414.m02412 wall-associated kinase, putative similar
to GB:CAB42872 from [Arabidopsis thaliana] (Plant Mol.
Biol. 39 (6), 1189-1196 (1999))
Length = 788
Score = 33.5 bits (73), Expect = 0.13
Identities = 20/51 (39%), Positives = 29/51 (56%), Gaps = 3/51 (5%)
Frame = -3
Query: 468 SPSCFMIVNSWYPIGSGS*RTVSDSVAP---GCSRSCTASRCVTPAKSFPF 325
SP F I NS +G S ++++ + P GC +CTAS+ P+KS PF
Sbjct: 125 SPFYFGIGNSLVAVGCNSKASLTN-INPSKVGCELNCTASKETLPSKSIPF 174
>At1g30835.1 68414.m03770 expressed protein
Length = 132
Score = 31.5 bits (68), Expect = 0.53
Identities = 14/30 (46%), Positives = 18/30 (60%)
Frame = +2
Query: 8 PPQPAPRKLSQTNGQAPTTKPSTNSTNAPL 97
PPQP PR S + T+K + NST+ PL
Sbjct: 45 PPQPRPRTSSPQQARRETSKLTFNSTDEPL 74
>At5g46390.2 68418.m05710 peptidase S41 family protein similar to
C-terminal peptidase of the D1 protein [Hordeum vulgare
subsp vulgare] GI:1296805; contains Pfam profiles
PF03572: Peptidase family S41B, PF00595: PDZ domain
(Also known as DHR or GLGF)
Length = 489
Score = 30.3 bits (65), Expect = 1.2
Identities = 17/47 (36%), Positives = 26/47 (55%), Gaps = 1/47 (2%)
Frame = +2
Query: 278 AARSGKLRMGDRLLKVNGNDLAGVTHRDAVQLLLQPGAT-LSLTVRH 415
AA ++ GD +L VNG D++G + + LL P T + L V+H
Sbjct: 226 AADIAGVKQGDEILAVNGMDVSGKSSFEVSSLLQGPSKTFVVLKVKH 272
>At5g46390.1 68418.m05709 peptidase S41 family protein similar to
C-terminal peptidase of the D1 protein [Hordeum vulgare
subsp vulgare] GI:1296805; contains Pfam profiles
PF03572: Peptidase family S41B, PF00595: PDZ domain
(Also known as DHR or GLGF)
Length = 428
Score = 30.3 bits (65), Expect = 1.2
Identities = 17/47 (36%), Positives = 26/47 (55%), Gaps = 1/47 (2%)
Frame = +2
Query: 278 AARSGKLRMGDRLLKVNGNDLAGVTHRDAVQLLLQPGAT-LSLTVRH 415
AA ++ GD +L VNG D++G + + LL P T + L V+H
Sbjct: 226 AADIAGVKQGDEILAVNGMDVSGKSSFEVSSLLQGPSKTFVVLKVKH 272
>At2g14890.2 68415.m01692 arabinogalactan-protein (AGP9) identical
to gi|10880495|gb|AAG24277
Length = 176
Score = 30.3 bits (65), Expect = 1.2
Identities = 19/49 (38%), Positives = 26/49 (53%), Gaps = 5/49 (10%)
Frame = +2
Query: 2 TLPPQPAPRKLSQTNGQAPTTKPS----TNSTNAPL-TAGAPQASTDDV 133
T PP P +Q APTTKP + S++ PL ++ AP STD +
Sbjct: 110 TPPPAPLASPPAQVPAPAPTTKPDSPSPSPSSSPPLPSSDAPGPSTDSI 158
>At2g14890.1 68415.m01693 arabinogalactan-protein (AGP9) identical
to gi|10880495|gb|AAG24277
Length = 191
Score = 30.3 bits (65), Expect = 1.2
Identities = 19/49 (38%), Positives = 26/49 (53%), Gaps = 5/49 (10%)
Frame = +2
Query: 2 TLPPQPAPRKLSQTNGQAPTTKPS----TNSTNAPL-TAGAPQASTDDV 133
T PP P +Q APTTKP + S++ PL ++ AP STD +
Sbjct: 110 TPPPAPLASPPAQVPAPAPTTKPDSPSPSPSSSPPLPSSDAPGPSTDSI 158
>At1g50200.1 68414.m05629 aminoacyl-tRNA synthetase family protein
contains Pfam profiles: PF01411 tRNA synthetases class
II (A), PF02272 DHHA1 domain
Length = 1003
Score = 30.3 bits (65), Expect = 1.2
Identities = 20/60 (33%), Positives = 28/60 (46%)
Frame = +3
Query: 189 VSSAAPIIRVYRSEERNQGFLSHTSCREESRRAQASSAWVIVC*K*TETTWPESRTATLY 368
+SS P RV+ S + F SH R S + +SS V+ + +ET WP R Y
Sbjct: 11 ISSTKPPSRVFYSSHLRRPFFSH--FRFSSSSSTSSSVAVMPGSEPSETQWPAKRVRDTY 68
>At3g11150.1 68416.m01351 expressed protein
Length = 371
Score = 29.5 bits (63), Expect = 2.1
Identities = 16/59 (27%), Positives = 24/59 (40%)
Frame = -3
Query: 447 VNSWYPIGSGS*RTVSDSVAPGCSRSCTASRCVTPAKSFPFTFSKRSPMRSLPERAATP 271
+N P+ T + P CS T S+ T + F + P+ SLP R + P
Sbjct: 8 LNHHQPLIKHGGATAAPPPTPSCSHLNTTSKSETAVDALSSLFHRLPPLLSLPNRRSIP 66
>At1g69220.2 68414.m07926 serine/threonine protein kinase, putative
identical to serine/threonine kinase [Arabidopsis
thaliana] gi|2352084|gb|AAB68776
Length = 809
Score = 29.5 bits (63), Expect = 2.1
Identities = 22/62 (35%), Positives = 28/62 (45%)
Frame = +2
Query: 29 KLSQTNGQAPTTKPSTNSTNAPLTAGAPQASTDDVFEDIQDVTLLKEGGSLGFSIIGGTD 208
K S+ G +KP NST APLT ST + + L EGG G I+ G D
Sbjct: 521 KSSEELGITVPSKPPQNSTEAPLT------STLNRQHITGNTVLAGEGGDFGTMIVHGED 574
Query: 209 HS 214
+
Sbjct: 575 ET 576
>At1g69220.1 68414.m07925 serine/threonine protein kinase, putative
identical to serine/threonine kinase [Arabidopsis
thaliana] gi|2352084|gb|AAB68776
Length = 836
Score = 29.5 bits (63), Expect = 2.1
Identities = 22/62 (35%), Positives = 28/62 (45%)
Frame = +2
Query: 29 KLSQTNGQAPTTKPSTNSTNAPLTAGAPQASTDDVFEDIQDVTLLKEGGSLGFSIIGGTD 208
K S+ G +KP NST APLT ST + + L EGG G I+ G D
Sbjct: 548 KSSEELGITVPSKPPQNSTEAPLT------STLNRQHITGNTVLAGEGGDFGTMIVHGED 601
Query: 209 HS 214
+
Sbjct: 602 ET 603
>At5g14920.1 68418.m01750 gibberellin-regulated family protein
similar to SP|P46689 Gibberellin-regulated protein 1
precursor {Arabidopsis thaliana}; contains Pfam profile
PF02704: Gibberellin regulated protein
Length = 275
Score = 29.1 bits (62), Expect = 2.8
Identities = 16/44 (36%), Positives = 20/44 (45%), Gaps = 2/44 (4%)
Frame = +2
Query: 8 PPQPA--PRKLSQTNGQAPTTKPSTNSTNAPLTAGAPQASTDDV 133
PP P+ P L T + PTTKP P+T P ST +
Sbjct: 54 PPTPSYKPPTLPTTPIKPPTTKPPVKPPTIPVTPVKPPVSTPPI 97
>At3g24550.1 68416.m03083 protein kinase family protein contains
Pfam domain PF00069: Protein kinase domain
Length = 652
Score = 29.1 bits (62), Expect = 2.8
Identities = 14/37 (37%), Positives = 18/37 (48%)
Frame = +2
Query: 2 TLPPQPAPRKLSQTNGQAPTTKPSTNSTNAPLTAGAP 112
T PP A T +P PSTNST+ P ++ P
Sbjct: 25 TTPPPAASSPPPTTTPSSPPPSPSTNSTSPPPSSPLP 61
>At3g50580.1 68416.m05532 proline-rich family protein contains
proline-rich extensin domains, INTERPRO:IPR002965
Length = 265
Score = 28.3 bits (60), Expect = 4.9
Identities = 31/110 (28%), Positives = 48/110 (43%), Gaps = 5/110 (4%)
Frame = -3
Query: 453 MIVNSWYPIGSGS*R----TVSDSVAPGCSRSCTASRCVTPAK-SFPFTFSKRSPMRSLP 289
M++N+ + G G + T S+ AP S S + TP+ S P K+SP P
Sbjct: 45 MLLNTGHSFGYGDSKVWKCTYSNGSAPAISISPSTPIPSTPSTPSPPPPAPKKSPPPPTP 104
Query: 288 ERAATPPGTTCEIKIPGSFPPNGTHE*SVPPMILKPRDPPSFKRVTSCMS 139
+++ +PP T F P+ T + S P PP+ K+ S S
Sbjct: 105 KKSPSPPSLT-------PFVPHPTPKKSPSPPPTPSLPPPAPKKSPSTPS 147
>At4g23300.1 68417.m03358 protein kinase family protein contains
Pfam domain, PF00069: Protein kinase domain
Length = 660
Score = 27.9 bits (59), Expect = 6.5
Identities = 12/27 (44%), Positives = 15/27 (55%)
Frame = -3
Query: 183 PRDPPSFKRVTSCMSSNTSSVEACGAP 103
P D P + S ++SNT SV A G P
Sbjct: 614 PEDRPKLSTIVSMLTSNTISVPAPGIP 640
>At2g33170.1 68415.m04064 leucine-rich repeat transmembrane protein
kinase, putative similar to receptor protein kinase
[Pinus sylvestris] gi|12054894|emb|CAC20842; contains
leucine rich repeat (LRR) domains, Pfam:PF00560;
contains protein kinase domain, Pfam:PF00069
Length = 1124
Score = 27.9 bits (59), Expect = 6.5
Identities = 16/50 (32%), Positives = 25/50 (50%)
Frame = +2
Query: 311 RLLKVNGNDLAGVTHRDAVQLLLQPGATLSLTVRHDPLPIGYQELTIIKQ 460
RLL + N L G+ + +L LS+ P+P G+Q LT ++Q
Sbjct: 352 RLLYLFQNKLTGIIPNELSKLRNLAKLDLSINSLTGPIPPGFQNLTSMRQ 401
>At1g77970.1 68414.m09086 hydroxyproline-rich glycoprotein family
protein
Length = 76
Score = 27.9 bits (59), Expect = 6.5
Identities = 13/34 (38%), Positives = 19/34 (55%)
Frame = +2
Query: 11 PQPAPRKLSQTNGQAPTTKPSTNSTNAPLTAGAP 112
P+P+P + APT+KP + ST P+ AP
Sbjct: 22 PEPSPESEPEP---APTSKPKSTSTPTPIPEPAP 52
>At1g15210.1 68414.m01818 ABC transporter family protein Similar to
gb|Z70524 GI:1514643 PDR5-like ABC transporter from
Spirodela polyrrhiza and is a member of the PF|00005 ABC
transporter family. ESTs gb|N97039 and gb|T43169 come
from this gene
Length = 1442
Score = 27.9 bits (59), Expect = 6.5
Identities = 13/41 (31%), Positives = 22/41 (53%), Gaps = 1/41 (2%)
Frame = +2
Query: 128 DVFEDIQDVTLLKEGGSLGFS-IIGGTDHSCVPFGGKEPGI 247
D+FE ++ L+K GG + +S +G H V + PG+
Sbjct: 1054 DIFEAFDELLLMKRGGHVIYSGPLGRNSHKVVEYFESFPGV 1094
>At3g02540.2 68416.m00243 ubiquitin family protein contains Pfam
profiles PF00240: Ubiquitin family, PF00627: UBA/TS-N
domain;
Length = 299
Score = 27.5 bits (58), Expect = 8.6
Identities = 15/43 (34%), Positives = 21/43 (48%), Gaps = 1/43 (2%)
Frame = +2
Query: 11 PQPAPRKLSQT-NGQAPTTKPSTNSTNAPLTAGAPQASTDDVF 136
P PAP ++T P P+T S++ P AP S DV+
Sbjct: 132 PTPAPVAATETVTTPIPEPVPATISSSTPAPDSAPVGSQGDVY 174
>At3g02540.1 68416.m00242 ubiquitin family protein contains Pfam
profiles PF00240: Ubiquitin family, PF00627: UBA/TS-N
domain;
Length = 419
Score = 27.5 bits (58), Expect = 8.6
Identities = 15/43 (34%), Positives = 21/43 (48%), Gaps = 1/43 (2%)
Frame = +2
Query: 11 PQPAPRKLSQT-NGQAPTTKPSTNSTNAPLTAGAPQASTDDVF 136
P PAP ++T P P+T S++ P AP S DV+
Sbjct: 132 PTPAPVAATETVTTPIPEPVPATISSSTPAPDSAPVGSQGDVY 174
>At2g04050.1 68415.m00386 MATE efflux family protein similar to
ripening regulated protein DDTFR18 [Lycopersicon
esculentum] GI:12231296; contains Pfam profile: PF01554
uncharacterized membrane protein family
Length = 476
Score = 27.5 bits (58), Expect = 8.6
Identities = 18/41 (43%), Positives = 21/41 (51%)
Frame = -2
Query: 610 THADLEPAIPSGRSAAVDF*YENSLIVGIVRVATLSFKATL 488
T A L IP G +AAV N L GI +VA +S A L
Sbjct: 295 TTASLHYVIPGGVAAAVSTRVSNKLGAGIPQVARVSVLAGL 335
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,862,356
Number of Sequences: 28952
Number of extensions: 293225
Number of successful extensions: 1133
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 1028
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1121
length of database: 12,070,560
effective HSP length: 79
effective length of database: 9,783,352
effective search space used: 1428369392
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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