Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-0977
         (711 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

CR954257-13|CAJ14164.1|  420|Anopheles gambiae predicted protein...    23   7.2  
AY428512-1|AAR89530.1|  420|Anopheles gambiae EKN1 protein.            23   7.2  
DQ342048-1|ABC69940.1|  847|Anopheles gambiae STIP protein.            23   9.5  
AF313909-1|AAL99382.1| 1024|Anopheles gambiae collagen IV alpha ...    23   9.5  

>CR954257-13|CAJ14164.1|  420|Anopheles gambiae predicted protein
           protein.
          Length = 420

 Score = 23.4 bits (48), Expect = 7.2
 Identities = 27/92 (29%), Positives = 37/92 (40%), Gaps = 1/92 (1%)
 Frame = -3

Query: 697 PRQERKSFTDYSEPRHRTELYPDLRSRD-ARVKKKTDSIDLRDPNGLRRRVSRFECETRL 521
           PR ER +     E +HR  L    + R   + +KK D I  +     R R  R   +  L
Sbjct: 103 PRAERATLKQQYEEQHRKRLEQQSKQRAIEKDRKKKDEIHRQIE---RERADRSAIDNLL 159

Query: 520 VKSHCLEPPDSRGSTVSISLPDSARLASALEA 425
            +S   E      + V    PD A+ ASA  A
Sbjct: 160 EESKQRELKRMELAMVKQYRPDPAK-ASAPNA 190


>AY428512-1|AAR89530.1|  420|Anopheles gambiae EKN1 protein.
          Length = 420

 Score = 23.4 bits (48), Expect = 7.2
 Identities = 27/92 (29%), Positives = 37/92 (40%), Gaps = 1/92 (1%)
 Frame = -3

Query: 697 PRQERKSFTDYSEPRHRTELYPDLRSRD-ARVKKKTDSIDLRDPNGLRRRVSRFECETRL 521
           PR ER +     E +HR  L    + R   + +KK D I  +     R R  R   +  L
Sbjct: 103 PRAERATLKQQYEEQHRKRLEQQSKQRAIEKDRKKKDEIHRQIE---RERADRSAIDNLL 159

Query: 520 VKSHCLEPPDSRGSTVSISLPDSARLASALEA 425
            +S   E      + V    PD A+ ASA  A
Sbjct: 160 EESKQRELKRMELAMVKQYRPDPAK-ASAPSA 190


>DQ342048-1|ABC69940.1|  847|Anopheles gambiae STIP protein.
          Length = 847

 Score = 23.0 bits (47), Expect = 9.5
 Identities = 13/36 (36%), Positives = 17/36 (47%)
 Frame = +3

Query: 480 EPRESGGSKQCDFTSRVSHSKRETRRRSPFGSRRSM 587
           + R   GSK     S  + S+ E  RR+P    RSM
Sbjct: 106 DARPRFGSKAAAANSSATSSESEDERRTPPQDMRSM 141


>AF313909-1|AAL99382.1| 1024|Anopheles gambiae collagen IV alpha 1
            chain protein.
          Length = 1024

 Score = 23.0 bits (47), Expect = 9.5
 Identities = 11/30 (36%), Positives = 15/30 (50%), Gaps = 1/30 (3%)
 Frame = +3

Query: 351  FGHLVH-ALGRAAGGAKLPSAGLCLNASKA 437
            +  L+H A+G   GG  L   G CL   +A
Sbjct: 936  YSFLMHTAVGHGGGGQSLSGPGSCLEDFRA 965


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 760,019
Number of Sequences: 2352
Number of extensions: 14549
Number of successful extensions: 19
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 19
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 19
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 72758970
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)