Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-0974
         (483 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U02964-1|AAA03444.1|  376|Anopheles gambiae actin 1D protein.         281   7e-78
U02933-1|AAA56882.1|  376|Anopheles gambiae actin 1D protein.         281   7e-78
U02930-1|AAA56881.1|  376|Anopheles gambiae actin 1D protein.         281   7e-78
CR954256-1|CAJ14142.1|  376|Anopheles gambiae actin protein.          266   4e-73
AY146756-1|AAO12071.1|  282|Anopheles gambiae odorant-binding pr...    24   2.4  
AY027891-1|AAK15783.1|  801|Anopheles gambiae collagen IV alpha ...    24   3.1  
AY330181-1|AAQ16287.1|  156|Anopheles gambiae odorant-binding pr...    23   4.2  
EF519478-1|ABP73565.1|  165|Anopheles gambiae CTLMA2 protein.          23   5.5  
AY578798-1|AAT07303.1|  356|Anopheles gambiae baboon protein.          23   5.5  
AY753540-1|AAV28543.1| 3320|Anopheles gambiae SGS3 protein.            23   7.3  
AY753539-1|AAV28542.1| 3318|Anopheles gambiae SGS2 protein.            23   7.3  
AJ441131-3|CAD29632.1|  568|Anopheles gambiae putative apyrase/n...    23   7.3  
AB097148-1|BAC82627.1|  357|Anopheles gambiae gag-like protein p...    23   7.3  

>U02964-1|AAA03444.1|  376|Anopheles gambiae actin 1D protein.
          Length = 376

 Score =  281 bits (690), Expect = 7e-78
 Identities = 128/131 (97%), Positives = 128/131 (97%)
 Frame = +3

Query: 90  MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 269
           MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1   MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60

Query: 270 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVGPEEHPALLTEATLNPKANREKM 449
           SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRV PEEHP LLTEA LNPKANREKM
Sbjct: 61  SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 120

Query: 450 TQIMFETFNTP 482
           TQIMFETFNTP
Sbjct: 121 TQIMFETFNTP 131


>U02933-1|AAA56882.1|  376|Anopheles gambiae actin 1D protein.
          Length = 376

 Score =  281 bits (690), Expect = 7e-78
 Identities = 128/131 (97%), Positives = 128/131 (97%)
 Frame = +3

Query: 90  MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 269
           MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1   MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60

Query: 270 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVGPEEHPALLTEATLNPKANREKM 449
           SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRV PEEHP LLTEA LNPKANREKM
Sbjct: 61  SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 120

Query: 450 TQIMFETFNTP 482
           TQIMFETFNTP
Sbjct: 121 TQIMFETFNTP 131


>U02930-1|AAA56881.1|  376|Anopheles gambiae actin 1D protein.
          Length = 376

 Score =  281 bits (690), Expect = 7e-78
 Identities = 128/131 (97%), Positives = 128/131 (97%)
 Frame = +3

Query: 90  MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 269
           MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1   MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60

Query: 270 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVGPEEHPALLTEATLNPKANREKM 449
           SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRV PEEHP LLTEA LNPKANREKM
Sbjct: 61  SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 120

Query: 450 TQIMFETFNTP 482
           TQIMFETFNTP
Sbjct: 121 TQIMFETFNTP 131


>CR954256-1|CAJ14142.1|  376|Anopheles gambiae actin protein.
          Length = 376

 Score =  266 bits (651), Expect = 4e-73
 Identities = 118/131 (90%), Positives = 123/131 (93%)
 Frame = +3

Query: 90  MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 269
           MCD++  ALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMG KD+YVGDEAQ
Sbjct: 1   MCDDDAGALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGNKDAYVGDEAQ 60

Query: 270 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVGPEEHPALLTEATLNPKANREKM 449
           SKRGILTLKYPIEHGI+TNWDDMEKIWHHTFYNELRV PEEHP LLTEA LNPK+NREKM
Sbjct: 61  SKRGILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKSNREKM 120

Query: 450 TQIMFETFNTP 482
           TQIMFETF  P
Sbjct: 121 TQIMFETFAAP 131


>AY146756-1|AAO12071.1|  282|Anopheles gambiae odorant-binding
           protein AgamOBP40 protein.
          Length = 282

 Score = 24.2 bits (50), Expect = 2.4
 Identities = 13/25 (52%), Positives = 15/25 (60%), Gaps = 1/25 (4%)
 Frame = +2

Query: 338 GEDLASYLLQ*AACRPRG-TPSTAD 409
           GEDLAS+ L+   C  R   P TAD
Sbjct: 197 GEDLASFSLRQGMCLQRNQQPPTAD 221


>AY027891-1|AAK15783.1|  801|Anopheles gambiae collagen IV alpha 1
           chain precursor protein.
          Length = 801

 Score = 23.8 bits (49), Expect = 3.1
 Identities = 9/17 (52%), Positives = 11/17 (64%)
 Frame = +2

Query: 197 GKAPPSGRDGRYGTEGL 247
           G+  P GRDG +G  GL
Sbjct: 344 GQPGPRGRDGNFGPVGL 360


>AY330181-1|AAQ16287.1|  156|Anopheles gambiae odorant-binding
           protein AgamOBP55 protein.
          Length = 156

 Score = 23.4 bits (48), Expect = 4.2
 Identities = 8/20 (40%), Positives = 14/20 (70%)
 Frame = +3

Query: 84  FKMCDEEVAALVVDNGSGMC 143
           +++C E+ A   +DNG+ MC
Sbjct: 42  YRVCHEQHATPQMDNGTVMC 61


>EF519478-1|ABP73565.1|  165|Anopheles gambiae CTLMA2 protein.
          Length = 165

 Score = 23.0 bits (47), Expect = 5.5
 Identities = 8/16 (50%), Positives = 10/16 (62%)
 Frame = -2

Query: 203 PSHDRGEHGARSIISC 156
           P+H RGEHG +    C
Sbjct: 121 PNHARGEHGQQPAERC 136


>AY578798-1|AAT07303.1|  356|Anopheles gambiae baboon protein.
          Length = 356

 Score = 23.0 bits (47), Expect = 5.5
 Identities = 17/48 (35%), Positives = 23/48 (47%)
 Frame = -2

Query: 161 SCETGLAHTGAIVYYQRGNFFVAHLELVFN*IVLL*INKLTCYCTASL 18
           S  TGLAH    +   RG   +AH +L    I++   + LTC C   L
Sbjct: 162 SIATGLAHLHMDIVGTRGKPAIAHRDLKSKNILVK--SNLTC-CIGDL 206


>AY753540-1|AAV28543.1| 3320|Anopheles gambiae SGS3 protein.
          Length = 3320

 Score = 22.6 bits (46), Expect = 7.3
 Identities = 7/21 (33%), Positives = 14/21 (66%)
 Frame = -2

Query: 359  GMMPNLLHVIPVSHDSVFDGV 297
            G++ N  +++  SH  +FDG+
Sbjct: 1065 GILVNDAYIVTASHKVLFDGI 1085


>AY753539-1|AAV28542.1| 3318|Anopheles gambiae SGS2 protein.
          Length = 3318

 Score = 22.6 bits (46), Expect = 7.3
 Identities = 7/21 (33%), Positives = 14/21 (66%)
 Frame = -2

Query: 359  GMMPNLLHVIPVSHDSVFDGV 297
            G++ N  +++  SH  +FDG+
Sbjct: 1066 GILVNDAYIVTASHKVLFDGI 1086


>AJ441131-3|CAD29632.1|  568|Anopheles gambiae putative
           apyrase/nucleotidase protein.
          Length = 568

 Score = 22.6 bits (46), Expect = 7.3
 Identities = 13/32 (40%), Positives = 16/32 (50%)
 Frame = -1

Query: 276 FCSVPHLLHKSPSVPYRPSRPDGGAFPRSRGT 181
           +CSVPH     P  P R  R   GA+ R  G+
Sbjct: 495 YCSVPHY---EPLDPERVYRVATGAYIRKGGS 523


>AB097148-1|BAC82627.1|  357|Anopheles gambiae gag-like protein
           protein.
          Length = 357

 Score = 22.6 bits (46), Expect = 7.3
 Identities = 9/17 (52%), Positives = 12/17 (70%)
 Frame = -1

Query: 375 AAHCRRYDAKSSPCHPS 325
           +AH RR+D  SSP  P+
Sbjct: 170 SAHDRRFDDASSPAVPA 186


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 551,787
Number of Sequences: 2352
Number of extensions: 12164
Number of successful extensions: 36
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 35
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 36
length of database: 563,979
effective HSP length: 60
effective length of database: 422,859
effective search space used: 42285900
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)