Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-0974
(483 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81584-6|CAB04678.1| 376|Caenorhabditis elegans Hypothetical pr... 280 3e-76
Z81584-4|CAB04676.1| 376|Caenorhabditis elegans Hypothetical pr... 280 3e-76
X16799-1|CAA34720.1| 376|Caenorhabditis elegans actin protein. 280 3e-76
X16798-1|CAA34719.1| 375|Caenorhabditis elegans actin protein. 280 3e-76
X16796-1|CAA34717.1| 376|Caenorhabditis elegans actin protein. 280 3e-76
U64601-5|AAB04575.1| 376|Caenorhabditis elegans Actin protein 4... 280 3e-76
Z81584-5|CAB04675.1| 376|Caenorhabditis elegans Hypothetical pr... 279 8e-76
X16797-1|CAA34718.1| 376|Caenorhabditis elegans actin protein. 277 2e-75
Z83241-1|CAB05817.1| 375|Caenorhabditis elegans Hypothetical pr... 272 9e-74
U64601-6|AAT92068.1| 362|Caenorhabditis elegans Actin protein 4... 241 1e-64
U64601-7|AAK77622.1| 332|Caenorhabditis elegans Actin protein 4... 187 3e-48
J01044-1|AAA27889.1| 86|Caenorhabditis elegans protein ( C.ele... 186 6e-48
J01042-1|AAA27887.1| 86|Caenorhabditis elegans protein ( C.ele... 186 6e-48
J01046-1|AAA27890.1| 86|Caenorhabditis elegans protein ( C.ele... 185 1e-47
J01043-1|AAA27888.1| 83|Caenorhabditis elegans protein ( C.ele... 180 6e-46
AL132949-19|CAB70110.2| 374|Caenorhabditis elegans Hypothetical... 154 3e-38
Z71181-1|CAA94894.1| 395|Caenorhabditis elegans Hypothetical pr... 122 1e-28
AC024200-9|AAF36012.1| 425|Caenorhabditis elegans Arp2/3 comple... 105 2e-23
AC006833-3|AAF60947.2| 436|Caenorhabditis elegans Hypothetical ... 74 5e-14
Z46676-5|CAA86667.3| 418|Caenorhabditis elegans Hypothetical pr... 49 2e-06
U24189-2|AAC47513.1| 418|Caenorhabditis elegans actin-related p... 49 2e-06
U41263-13|AAC24428.2| 1844|Caenorhabditis elegans Hypothetical p... 33 0.14
Z70208-2|CAA94136.1| 304|Caenorhabditis elegans Hypothetical pr... 32 0.25
Z99773-3|CAE11316.1| 305|Caenorhabditis elegans Hypothetical pr... 30 0.77
U41278-7|AAT81193.1| 680|Caenorhabditis elegans Hypothetical pr... 30 1.0
U41278-6|AAK31510.3| 771|Caenorhabditis elegans Hypothetical pr... 30 1.0
AC006744-2|AAF60505.2| 503|Caenorhabditis elegans Cytochrome p4... 29 2.3
U39674-1|AAA80413.2| 137|Caenorhabditis elegans Hypothetical pr... 28 3.1
AF025453-5|AAY55851.1| 279|Caenorhabditis elegans Hypothetical ... 28 4.1
Z81551-1|CAB04483.2| 335|Caenorhabditis elegans Hypothetical pr... 27 5.4
Z49968-1|CAA90258.2| 499|Caenorhabditis elegans Hypothetical pr... 27 5.4
AF188477-1|AAF01458.1| 1418|Caenorhabditis elegans phospholipase... 27 5.4
AF179426-1|AAF05701.1| 1431|Caenorhabditis elegans phospholipase... 27 5.4
AF068714-6|AAL77167.1| 1419|Caenorhabditis elegans Egg laying de... 27 5.4
AF068714-5|AAL77168.1| 1431|Caenorhabditis elegans Egg laying de... 27 5.4
AC025724-1|AAG23375.2| 4177|Caenorhabditis elegans Enhancer of e... 27 7.1
Z83225-2|CAB05722.1| 732|Caenorhabditis elegans Hypothetical pr... 27 9.4
Z82258-1|CAB05122.2| 906|Caenorhabditis elegans Hypothetical pr... 27 9.4
Z81097-19|CAB03177.1| 732|Caenorhabditis elegans Hypothetical p... 27 9.4
>Z81584-6|CAB04678.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.6 protein.
Length = 376
Score = 280 bits (687), Expect = 3e-76
Identities = 127/131 (96%), Positives = 128/131 (97%)
Frame = +3
Query: 90 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 269
MCD+EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 270 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVGPEEHPALLTEATLNPKANREKM 449
SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRV PEEHP LLTEA LNPKANREKM
Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 120
Query: 450 TQIMFETFNTP 482
TQIMFETFNTP
Sbjct: 121 TQIMFETFNTP 131
>Z81584-4|CAB04676.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.4 protein.
Length = 376
Score = 280 bits (687), Expect = 3e-76
Identities = 127/131 (96%), Positives = 128/131 (97%)
Frame = +3
Query: 90 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 269
MCD+EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 270 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVGPEEHPALLTEATLNPKANREKM 449
SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRV PEEHP LLTEA LNPKANREKM
Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 120
Query: 450 TQIMFETFNTP 482
TQIMFETFNTP
Sbjct: 121 TQIMFETFNTP 131
>X16799-1|CAA34720.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 280 bits (687), Expect = 3e-76
Identities = 127/131 (96%), Positives = 128/131 (97%)
Frame = +3
Query: 90 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 269
MCD+EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 270 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVGPEEHPALLTEATLNPKANREKM 449
SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRV PEEHP LLTEA LNPKANREKM
Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 120
Query: 450 TQIMFETFNTP 482
TQIMFETFNTP
Sbjct: 121 TQIMFETFNTP 131
>X16798-1|CAA34719.1| 375|Caenorhabditis elegans actin protein.
Length = 375
Score = 280 bits (687), Expect = 3e-76
Identities = 127/131 (96%), Positives = 128/131 (97%)
Frame = +3
Query: 90 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 269
MCD+EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 270 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVGPEEHPALLTEATLNPKANREKM 449
SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRV PEEHP LLTEA LNPKANREKM
Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 120
Query: 450 TQIMFETFNTP 482
TQIMFETFNTP
Sbjct: 121 TQIMFETFNTP 131
>X16796-1|CAA34717.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 280 bits (687), Expect = 3e-76
Identities = 127/131 (96%), Positives = 128/131 (97%)
Frame = +3
Query: 90 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 269
MCD+EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 270 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVGPEEHPALLTEATLNPKANREKM 449
SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRV PEEHP LLTEA LNPKANREKM
Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 120
Query: 450 TQIMFETFNTP 482
TQIMFETFNTP
Sbjct: 121 TQIMFETFNTP 131
>U64601-5|AAB04575.1| 376|Caenorhabditis elegans Actin protein 4,
isoform a protein.
Length = 376
Score = 280 bits (687), Expect = 3e-76
Identities = 127/131 (96%), Positives = 128/131 (97%)
Frame = +3
Query: 90 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 269
MCD+EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 270 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVGPEEHPALLTEATLNPKANREKM 449
SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRV PEEHP LLTEA LNPKANREKM
Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 120
Query: 450 TQIMFETFNTP 482
TQIMFETFNTP
Sbjct: 121 TQIMFETFNTP 131
>Z81584-5|CAB04675.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.5 protein.
Length = 376
Score = 279 bits (684), Expect = 8e-76
Identities = 126/131 (96%), Positives = 128/131 (97%)
Frame = +3
Query: 90 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 269
MCD++VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 270 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVGPEEHPALLTEATLNPKANREKM 449
SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRV PEEHP LLTEA LNPKANREKM
Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 120
Query: 450 TQIMFETFNTP 482
TQIMFETFNTP
Sbjct: 121 TQIMFETFNTP 131
>X16797-1|CAA34718.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 277 bits (680), Expect = 2e-75
Identities = 124/131 (94%), Positives = 128/131 (97%)
Frame = +3
Query: 90 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 269
MCD++VAAL++DNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1 MCDDDVAALILDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 270 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVGPEEHPALLTEATLNPKANREKM 449
SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRV PEEHP LLTEA LNPKANREKM
Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 120
Query: 450 TQIMFETFNTP 482
TQIMFETFNTP
Sbjct: 121 TQIMFETFNTP 131
>Z83241-1|CAB05817.1| 375|Caenorhabditis elegans Hypothetical
protein T25C8.2 protein.
Length = 375
Score = 272 bits (667), Expect = 9e-74
Identities = 122/129 (94%), Positives = 126/129 (97%)
Frame = +3
Query: 96 DEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 275
+EE+AALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK
Sbjct: 2 EEEIAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 61
Query: 276 RGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVGPEEHPALLTEATLNPKANREKMTQ 455
RGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELR+ PEEHP LLTEA LNPK+NREKMTQ
Sbjct: 62 RGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRIAPEEHPVLLTEAPLNPKSNREKMTQ 121
Query: 456 IMFETFNTP 482
IMFETFNTP
Sbjct: 122 IMFETFNTP 130
>U64601-6|AAT92068.1| 362|Caenorhabditis elegans Actin protein 4,
isoform c protein.
Length = 362
Score = 241 bits (591), Expect = 1e-64
Identities = 109/113 (96%), Positives = 110/113 (97%)
Frame = +3
Query: 144 KAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVT 323
+AGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVT
Sbjct: 5 RAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVT 64
Query: 324 NWDDMEKIWHHTFYNELRVGPEEHPALLTEATLNPKANREKMTQIMFETFNTP 482
NWDDMEKIWHHTFYNELRV PEEHP LLTEA LNPKANREKMTQIMFETFNTP
Sbjct: 65 NWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTP 117
>U64601-7|AAK77622.1| 332|Caenorhabditis elegans Actin protein 4,
isoform b protein.
Length = 332
Score = 187 bits (456), Expect = 3e-48
Identities = 84/87 (96%), Positives = 84/87 (96%)
Frame = +3
Query: 222 MVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVGPEEHPA 401
MVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRV PEEHP
Sbjct: 1 MVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPV 60
Query: 402 LLTEATLNPKANREKMTQIMFETFNTP 482
LLTEA LNPKANREKMTQIMFETFNTP
Sbjct: 61 LLTEAPLNPKANREKMTQIMFETFNTP 87
>J01044-1|AAA27889.1| 86|Caenorhabditis elegans protein (
C.elegans (nematode)actin gene III, 5' end. ).
Length = 86
Score = 186 bits (454), Expect = 6e-48
Identities = 85/86 (98%), Positives = 86/86 (100%)
Frame = +3
Query: 90 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 269
MCD+EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 270 SKRGILTLKYPIEHGIVTNWDDMEKI 347
SKRGILTLKYPIEHGIVTNWDDMEKI
Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDMEKI 86
>J01042-1|AAA27887.1| 86|Caenorhabditis elegans protein (
C.elegans (nematode)actin gene I, 5' end. ).
Length = 86
Score = 186 bits (454), Expect = 6e-48
Identities = 85/86 (98%), Positives = 86/86 (100%)
Frame = +3
Query: 90 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 269
MCD+EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 270 SKRGILTLKYPIEHGIVTNWDDMEKI 347
SKRGILTLKYPIEHGIVTNWDDMEKI
Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDMEKI 86
>J01046-1|AAA27890.1| 86|Caenorhabditis elegans protein (
C.elegans (nematode)actin gene IV, 5' end. ).
Length = 86
Score = 185 bits (451), Expect = 1e-47
Identities = 84/86 (97%), Positives = 86/86 (100%)
Frame = +3
Query: 90 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 269
MCD++VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 270 SKRGILTLKYPIEHGIVTNWDDMEKI 347
SKRGILTLKYPIEHGIVTNWDDMEKI
Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDMEKI 86
>J01043-1|AAA27888.1| 83|Caenorhabditis elegans protein (
C.elegans (nematode)actin gene II, 5' end. ).
Length = 83
Score = 180 bits (437), Expect = 6e-46
Identities = 81/83 (97%), Positives = 83/83 (100%)
Frame = +3
Query: 90 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 269
MCD++VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 270 SKRGILTLKYPIEHGIVTNWDDM 338
SKRGILTLKYPIEHGIVTNWDDM
Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDM 83
>AL132949-19|CAB70110.2| 374|Caenorhabditis elegans Hypothetical
protein Y53F4B.22 protein.
Length = 374
Score = 154 bits (374), Expect = 3e-38
Identities = 66/124 (53%), Positives = 91/124 (73%), Gaps = 1/124 (0%)
Frame = +3
Query: 114 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTL 293
+V+DNGSG+ KAGFAG+ P+ F + VGRP++ VM G D ++G +A+S RG+ ++
Sbjct: 11 VVIDNGSGVIKAGFAGEQQPKVRFANFVGRPKYHRVMAGGLDGDIFIGPKAESNRGLFSI 70
Query: 294 KYPIEHGIVTNWDDMEKIWHHTF-YNELRVGPEEHPALLTEATLNPKANREKMTQIMFET 470
+YP+EHGIV NW DMEKIW + F ++L++ PEEHP LLT+A LNP NRE+ +I FET
Sbjct: 71 EYPMEHGIVNNWSDMEKIWEYIFGQDQLKIFPEEHPVLLTDAPLNPLKNRERSAEIFFET 130
Query: 471 FNTP 482
FN P
Sbjct: 131 FNVP 134
>Z71181-1|CAA94894.1| 395|Caenorhabditis elegans Hypothetical
protein K07C5.1 protein.
Length = 395
Score = 122 bits (294), Expect = 1e-28
Identities = 61/123 (49%), Positives = 81/123 (65%), Gaps = 3/123 (2%)
Frame = +3
Query: 114 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVM-VGMGQ-KDSYVGDEAQSKRGIL 287
+VVDNG+G K G+AG + P +FPS+VGRP + VG + KD VG+E R +L
Sbjct: 9 IVVDNGTGFVKCGYAGTNFPAHIFPSMVGRPIVRSTQRVGNIEIKDLMVGEECSQLRQML 68
Query: 288 TLKYPIEHGIVTNWDDMEKIWHHTFYNE-LRVGPEEHPALLTEATLNPKANREKMTQIMF 464
+ YP+++GIV NWDDM +W HTF E L + P+E LLTE LNP +NREKM Q+MF
Sbjct: 69 DINYPMDNGIVRNWDDMAHVWDHTFGPEKLDIDPKECKLLLTEPPLNPNSNREKMFQVMF 128
Query: 465 ETF 473
E +
Sbjct: 129 EQY 131
>AC024200-9|AAF36012.1| 425|Caenorhabditis elegans Arp2/3 complex
component protein 1 protein.
Length = 425
Score = 105 bits (252), Expect = 2e-23
Identities = 59/144 (40%), Positives = 77/144 (53%), Gaps = 13/144 (9%)
Frame = +3
Query: 90 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSI------VGRPRHQG------VMVGM 233
M ++ A V+DNG+G K G+AG+ P+ + PS V Q V G+
Sbjct: 1 MSAHQLPACVIDNGTGYTKLGYAGNTEPQFIIPSAIAVKDKVASSNSQAMRWNNRVGAGI 60
Query: 234 GQKDSYVGDEAQSKRGI-LTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVGPEEHPALLT 410
D ++GDEA S T+KYPI HGIV +WD ME+ W + LR PE+H LLT
Sbjct: 61 DDLDFFIGDEALSPAATNYTVKYPIRHGIVEDWDLMERYWEQCIFKYLRAEPEDHFFLLT 120
Query: 411 EATLNPKANREKMTQIMFETFNTP 482
E LN NRE +IMFE+FN P
Sbjct: 121 EPPLNTPENREYTAEIMFESFNVP 144
>AC006833-3|AAF60947.2| 436|Caenorhabditis elegans Hypothetical
protein ZK616.4 protein.
Length = 436
Score = 74.1 bits (174), Expect = 5e-14
Identities = 48/145 (33%), Positives = 73/145 (50%), Gaps = 17/145 (11%)
Frame = +3
Query: 99 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEA--QS 272
+EV+ LV D GS + GFAG++ P+ PS + Q+ GD + Q+
Sbjct: 9 DEVSGLVFDAGSQSFRVGFAGEEYPKGDIPSYIAVQEALPDDTIEKQEAMEEGDNSKVQT 68
Query: 273 KR------GILTLKYP---------IEHGIVTNWDDMEKIWHHTFYNELRVGPEEHPALL 407
KR G + P ++ G++ +W+ EKI H++ N L P EHP L
Sbjct: 69 KREKNFFIGTTKIIVPRARTNMESFMKEGLIEDWELFEKIVEHSYENILYSNPSEHPVLF 128
Query: 408 TEATLNPKANREKMTQIMFETFNTP 482
+E++ N +A REK+T+IMFE F P
Sbjct: 129 SESSWNDRARREKLTEIMFEKFQVP 153
>Z46676-5|CAA86667.3| 418|Caenorhabditis elegans Hypothetical
protein C08B11.6 protein.
Length = 418
Score = 48.8 bits (111), Expect = 2e-06
Identities = 34/123 (27%), Positives = 57/123 (46%)
Frame = +3
Query: 105 VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGI 284
+ ++ DNG K G ++PR V SIV + +H+ V + + +E K +
Sbjct: 3 LTTIIFDNGGHNMKIGTIDSESPRLVPNSIV-KAKHEKKRVFVAHEQ----EECSDKFSL 57
Query: 285 LTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVGPEEHPALLTEATLNPKANREKMTQIMF 464
++ PIE G V NWD ++IW TF + V LT+ A + ++I+F
Sbjct: 58 FYVR-PIERGYVVNWDTQQQIWEKTF-GSMDVEASTSRIALTDNNYLIPALPDVSSEILF 115
Query: 465 ETF 473
+ F
Sbjct: 116 DYF 118
>U24189-2|AAC47513.1| 418|Caenorhabditis elegans actin-related
protein-like protein.
Length = 418
Score = 48.8 bits (111), Expect = 2e-06
Identities = 34/123 (27%), Positives = 57/123 (46%)
Frame = +3
Query: 105 VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGI 284
+ ++ DNG K G ++PR V SIV + +H+ V + + +E K +
Sbjct: 3 LTTIIFDNGGHNMKIGTIDSESPRLVPNSIV-KAKHEKKRVFVAHEQ----EECSDKFSL 57
Query: 285 LTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVGPEEHPALLTEATLNPKANREKMTQIMF 464
++ PIE G V NWD ++IW TF + V LT+ A + ++I+F
Sbjct: 58 FYVR-PIERGYVVNWDTQQQIWEKTF-GSMDVEASTSRIALTDNNYLIPALPDVSSEILF 115
Query: 465 ETF 473
+ F
Sbjct: 116 DYF 118
>U41263-13|AAC24428.2| 1844|Caenorhabditis elegans Hypothetical
protein T19D12.1 protein.
Length = 1844
Score = 32.7 bits (71), Expect = 0.14
Identities = 23/76 (30%), Positives = 34/76 (44%), Gaps = 1/76 (1%)
Frame = -3
Query: 319 TIPCSMGYLRVRIPLLLCASSPT*ESFCPIPTITP*WRGLPTIEGN-TARGASSPAKPAL 143
T+ S PL++ +SS S TITP +G+PT N S+P P
Sbjct: 451 TLTLSQSPTPTSTPLVVSSSSSGSSSTVVTSTITPSTQGVPTSTSNQPTPSTSNPTTPKS 510
Query: 142 HIPEPLSTTNAATSSS 95
+ STT A +++S
Sbjct: 511 TVTASPSTTGATSTAS 526
>Z70208-2|CAA94136.1| 304|Caenorhabditis elegans Hypothetical
protein F54B11.2 protein.
Length = 304
Score = 31.9 bits (69), Expect = 0.25
Identities = 28/83 (33%), Positives = 31/83 (37%)
Frame = +2
Query: 185 PLDRGKAPPSGRDGRYGTEGLLCRR*GTEQKRYPDPQIPHRTRNRD*LG*HGEDLASYLL 364
P G A P+G DG GT G + YP+P P G G D AS
Sbjct: 189 PGPSGPAGPAGNDGAAGTPG---PDGPAGESTYPEPAAPGPAGPPGPAGPPGPDGASPTA 245
Query: 365 Q*AACRPRGTPSTAD*GYPQPQG 433
A P G P A G P P G
Sbjct: 246 APGAAGPPGPPGPA--GAPGPDG 266
>Z99773-3|CAE11316.1| 305|Caenorhabditis elegans Hypothetical
protein H06A10.2 protein.
Length = 305
Score = 30.3 bits (65), Expect = 0.77
Identities = 27/79 (34%), Positives = 30/79 (37%)
Frame = +2
Query: 197 GKAPPSGRDGRYGTEGLLCRR*GTEQKRYPDPQIPHRTRNRD*LG*HGEDLASYLLQ*AA 376
G A P+G DG GT G + YP+P P G G D AS A
Sbjct: 194 GPAGPAGNDGAAGTPG---PDGPAGESTYPEPAGPGPAGPPGPAGPPGPDGASPTAAPGA 250
Query: 377 CRPRGTPSTAD*GYPQPQG 433
P G P A G P P G
Sbjct: 251 AGPPGPPGPA--GAPGPDG 267
>U41278-7|AAT81193.1| 680|Caenorhabditis elegans Hypothetical
protein F33G12.6b protein.
Length = 680
Score = 29.9 bits (64), Expect = 1.0
Identities = 15/53 (28%), Positives = 24/53 (45%), Gaps = 1/53 (1%)
Frame = -1
Query: 276 FCSVPHLLHKSPSVPYRPSRPDGGAFPRSRGTRREEH-HLLRNRPCTYRSHCL 121
FC + H++ + P R D +RG +++H RNRPC C+
Sbjct: 393 FCVIKKSEHENKENAHLPPREDRTLDVTTRGGEKDKHSEYARNRPCAASLPCV 445
>U41278-6|AAK31510.3| 771|Caenorhabditis elegans Hypothetical
protein F33G12.6a protein.
Length = 771
Score = 29.9 bits (64), Expect = 1.0
Identities = 15/53 (28%), Positives = 24/53 (45%), Gaps = 1/53 (1%)
Frame = -1
Query: 276 FCSVPHLLHKSPSVPYRPSRPDGGAFPRSRGTRREEH-HLLRNRPCTYRSHCL 121
FC + H++ + P R D +RG +++H RNRPC C+
Sbjct: 393 FCVIKKSEHENKENAHLPPREDRTLDVTTRGGEKDKHSEYARNRPCAASLPCV 445
>AC006744-2|AAF60505.2| 503|Caenorhabditis elegans Cytochrome p450
family protein 29A3 protein.
Length = 503
Score = 28.7 bits (61), Expect = 2.3
Identities = 14/43 (32%), Positives = 20/43 (46%)
Frame = +3
Query: 315 IVTNWDDMEKIWHHTFYNELRVGPEEHPALLTEATLNPKANRE 443
IV+ W M+ I + Y++L GP HP T + K E
Sbjct: 16 IVSFWKIMKNILKYRKYDDLLPGPPAHPIFGNTKTFSNKTTEE 58
>U39674-1|AAA80413.2| 137|Caenorhabditis elegans Hypothetical
protein C06E2.5 protein.
Length = 137
Score = 28.3 bits (60), Expect = 3.1
Identities = 13/35 (37%), Positives = 17/35 (48%)
Frame = +3
Query: 378 VGPEEHPALLTEATLNPKANREKMTQIMFETFNTP 482
VG E PA T P+ N+E T++ TF P
Sbjct: 85 VGATEEPAAKRARTDTPEPNKENTTEVPRRTFKIP 119
>AF025453-5|AAY55851.1| 279|Caenorhabditis elegans Hypothetical
protein C08F1.11 protein.
Length = 279
Score = 27.9 bits (59), Expect = 4.1
Identities = 10/25 (40%), Positives = 15/25 (60%)
Frame = +3
Query: 144 KAGFAGDDAPRAVFPSIVGRPRHQG 218
KA + G D P+A F I+G ++G
Sbjct: 44 KASYLGHDTPQATFREIIGNKEYRG 68
>Z81551-1|CAB04483.2| 335|Caenorhabditis elegans Hypothetical
protein F56A12.1 protein.
Length = 335
Score = 27.5 bits (58), Expect = 5.4
Identities = 11/27 (40%), Positives = 18/27 (66%), Gaps = 2/27 (7%)
Frame = +3
Query: 324 NWDDMEKIWHHTFYNE--LRVGPEEHP 398
+++D++ IWHH Y E L+ G E +P
Sbjct: 172 HYNDLQDIWHHARYKESQLKRGKELNP 198
>Z49968-1|CAA90258.2| 499|Caenorhabditis elegans Hypothetical
protein M110.1 protein.
Length = 499
Score = 27.5 bits (58), Expect = 5.4
Identities = 12/17 (70%), Positives = 13/17 (76%)
Frame = +2
Query: 194 RGKAPPSGRDGRYGTEG 244
RGKA +GRDGR G EG
Sbjct: 216 RGKAGHTGRDGRPGLEG 232
>AF188477-1|AAF01458.1| 1418|Caenorhabditis elegans phospholipase C
beta protein.
Length = 1418
Score = 27.5 bits (58), Expect = 5.4
Identities = 11/24 (45%), Positives = 18/24 (75%)
Frame = -3
Query: 169 ASSPAKPALHIPEPLSTTNAATSS 98
+SSPA P++ P P +T++ +TSS
Sbjct: 652 SSSPATPSISGPPPCATSSGSTSS 675
>AF179426-1|AAF05701.1| 1431|Caenorhabditis elegans phospholipase C
beta homolog EGL-8 protein.
Length = 1431
Score = 27.5 bits (58), Expect = 5.4
Identities = 11/24 (45%), Positives = 18/24 (75%)
Frame = -3
Query: 169 ASSPAKPALHIPEPLSTTNAATSS 98
+SSPA P++ P P +T++ +TSS
Sbjct: 653 SSSPATPSISGPPPCATSSGSTSS 676
>AF068714-6|AAL77167.1| 1419|Caenorhabditis elegans Egg laying
defective protein 8,isoform a protein.
Length = 1419
Score = 27.5 bits (58), Expect = 5.4
Identities = 11/24 (45%), Positives = 18/24 (75%)
Frame = -3
Query: 169 ASSPAKPALHIPEPLSTTNAATSS 98
+SSPA P++ P P +T++ +TSS
Sbjct: 653 SSSPATPSISGPPPCATSSGSTSS 676
>AF068714-5|AAL77168.1| 1431|Caenorhabditis elegans Egg laying
defective protein 8,isoform b protein.
Length = 1431
Score = 27.5 bits (58), Expect = 5.4
Identities = 11/24 (45%), Positives = 18/24 (75%)
Frame = -3
Query: 169 ASSPAKPALHIPEPLSTTNAATSS 98
+SSPA P++ P P +T++ +TSS
Sbjct: 653 SSSPATPSISGPPPCATSSGSTSS 676
>AC025724-1|AAG23375.2| 4177|Caenorhabditis elegans Enhancer of
efl-1 mutant phenotypeprotein 1 protein.
Length = 4177
Score = 27.1 bits (57), Expect = 7.1
Identities = 15/37 (40%), Positives = 21/37 (56%)
Frame = -2
Query: 329 PVSHDSVFDGVFEGQDTSFALCLISYIRVLLSHTDHH 219
PVS DSV F +D CL+S +R+L++ D H
Sbjct: 232 PVSSDSVPSQQFSKEDL---YCLLSRVRMLVTFEDWH 265
>Z83225-2|CAB05722.1| 732|Caenorhabditis elegans Hypothetical
protein F42H11.2 protein.
Length = 732
Score = 26.6 bits (56), Expect = 9.4
Identities = 16/59 (27%), Positives = 30/59 (50%), Gaps = 4/59 (6%)
Frame = +3
Query: 198 GRPRHQGVMVGMGQKDSYVGD----EAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTF 362
G PRH+ + G+ ++++V + EA + + K HG +WD++ K + TF
Sbjct: 629 GIPRHE-ISHGVSDEEAFVREASIIEAVKLKNLRNKKAGEFHGTTKSWDNITKSEYGTF 686
>Z82258-1|CAB05122.2| 906|Caenorhabditis elegans Hypothetical
protein C27H2.2a protein.
Length = 906
Score = 26.6 bits (56), Expect = 9.4
Identities = 17/47 (36%), Positives = 27/47 (57%), Gaps = 5/47 (10%)
Frame = -3
Query: 352 CQIFSMSSQLVTIPC-SMGYLRVRIPL----LLCASSPT*ESFCPIP 227
CQ+FS QLVT+ SMG +++++ + LL + S T + P P
Sbjct: 251 CQLFSSQPQLVTMNLNSMGTIKLQLVVTWLPLLASKSSTKPTIAPNP 297
>Z81097-19|CAB03177.1| 732|Caenorhabditis elegans Hypothetical
protein F42H11.2 protein.
Length = 732
Score = 26.6 bits (56), Expect = 9.4
Identities = 16/59 (27%), Positives = 30/59 (50%), Gaps = 4/59 (6%)
Frame = +3
Query: 198 GRPRHQGVMVGMGQKDSYVGD----EAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTF 362
G PRH+ + G+ ++++V + EA + + K HG +WD++ K + TF
Sbjct: 629 GIPRHE-ISHGVSDEEAFVREASIIEAVKLKNLRNKKAGEFHGTTKSWDNITKSEYGTF 686
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,590,375
Number of Sequences: 27780
Number of extensions: 259366
Number of successful extensions: 947
Number of sequences better than 10.0: 39
Number of HSP's better than 10.0 without gapping: 868
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 941
length of database: 12,740,198
effective HSP length: 76
effective length of database: 10,628,918
effective search space used: 892829112
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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