Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-0970
         (699 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292357-1|CAL23169.2|  355|Tribolium castaneum gustatory recept...    23   2.4  
AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    22   5.5  
AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    21   9.7  

>AM292357-1|CAL23169.2|  355|Tribolium castaneum gustatory receptor
           candidate 36 protein.
          Length = 355

 Score = 23.0 bits (47), Expect = 2.4
 Identities = 19/80 (23%), Positives = 32/80 (40%)
 Frame = +3

Query: 447 YRRKLKPTNN*IIRTIAIVTNFRFLLNIYKKKRLYTLVA*YYNQTCVPKLIMYFVNCNLS 626
           Y   LK     + + + I T+ R++  +Y   R+ T +    N      LI+    C  S
Sbjct: 182 YALALKNRFKELQKYLKIETSCRYVGTLY---RILTTMMEMVNDIFGWTLILILAKCITS 238

Query: 627 QYVKLYVCMYVCSLESAFTL 686
               LY C+      + FT+
Sbjct: 239 SLSSLYTCIAGYEFNANFTI 258


>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 21.8 bits (44), Expect = 5.5
 Identities = 10/38 (26%), Positives = 19/38 (50%)
 Frame = -1

Query: 582 MFDCNIKLRECTIAFFYIYLIKTESL*QLLLYELFNYL 469
           +F C + +  C   F+Y +++ T  L  L+    F Y+
Sbjct: 227 LFYCVLIILLCIYYFYYAFILFTVHLLLLVCIYYFYYM 264


>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
           candidate 46 protein.
          Length = 1451

 Score = 21.0 bits (42), Expect = 9.7
 Identities = 8/17 (47%), Positives = 11/17 (64%)
 Frame = -2

Query: 494 YCTNYLIICRL*FSTIQ 444
           Y  N + IC + +STIQ
Sbjct: 918 YTANVVCICHVCYSTIQ 934


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 156,574
Number of Sequences: 336
Number of extensions: 3410
Number of successful extensions: 3
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18426585
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)