Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-0969
(786 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF014939-4|AAB63932.1| 1277|Caenorhabditis elegans Hypothetical ... 43 2e-04
Z68753-7|CAA92987.1| 240|Caenorhabditis elegans Hypothetical pr... 31 0.93
Z81553-7|CAB04496.4| 797|Caenorhabditis elegans Hypothetical pr... 30 1.6
AC006830-1|AAK68610.3| 802|Caenorhabditis elegans Hypothetical ... 30 2.2
U80025-2|AAD32270.3| 806|Caenorhabditis elegans Hypothetical pr... 29 2.9
U64599-2|ABB88205.1| 420|Caenorhabditis elegans Unidentified vi... 29 2.9
U64599-1|AAB04560.3| 426|Caenorhabditis elegans Unidentified vi... 29 2.9
Z98877-9|CAB63405.1| 348|Caenorhabditis elegans Hypothetical pr... 29 5.0
AF022985-5|AAB69974.1| 299|Caenorhabditis elegans Hypothetical ... 28 6.6
>AF014939-4|AAB63932.1| 1277|Caenorhabditis elegans Hypothetical
protein ZC132.5 protein.
Length = 1277
Score = 43.2 bits (97), Expect = 2e-04
Identities = 24/87 (27%), Positives = 44/87 (50%), Gaps = 6/87 (6%)
Frame = -1
Query: 624 WRRWKLEYLHTLQQRQKWYVD---ALNLS--INDLVLIHNDNAPCQQWSLGRVEQIHPGL 460
W+ W YL L++ K +D +N S + +VLI + N P W +G++ + P
Sbjct: 1052 WKIWNKTYLSELRETHKLRMDNKREINDSPFVGQVVLICDPNLPRNNWKMGKITETKPST 1111
Query: 459 DGRVRVVTVRTQNSK-LKRLVTKLSPL 382
DG +R + T + ++R + ++PL
Sbjct: 1112 DGILREAHLLTATGRTIRRPINLITPL 1138
>Z68753-7|CAA92987.1| 240|Caenorhabditis elegans Hypothetical
protein ZC518.4 protein.
Length = 240
Score = 31.1 bits (67), Expect = 0.93
Identities = 17/52 (32%), Positives = 28/52 (53%)
Frame = -1
Query: 210 NIKKVYLIQKYCFSQTLLFNLCVCPCVLNSSI*NSAPGTEDHK*YRASICEY 55
N K +YLI F QTL+ ++ +C ++ SI GTED + +C++
Sbjct: 2 NSKLLYLISLIQFFQTLITSITICAILIYCSI----NGTEDEEAANIEMCQF 49
>Z81553-7|CAB04496.4| 797|Caenorhabditis elegans Hypothetical
protein F56H6.7 protein.
Length = 797
Score = 30.3 bits (65), Expect = 1.6
Identities = 16/58 (27%), Positives = 28/58 (48%)
Frame = -1
Query: 762 SEFDVLTPGHFWLVVQLVSAPSYDIADVSINYLTRWQCIKQSTLHFWRRWKLEYLHTL 589
+EF + G+ W+VV VS P+ D+ ++ + W + W+LE +H L
Sbjct: 51 NEFPTIKAGNRWIVVTSVSPPTEDVKRLAA--IEDWNLVVVGDTKTPLDWQLENVHFL 106
>AC006830-1|AAK68610.3| 802|Caenorhabditis elegans Hypothetical
protein ZK105.3 protein.
Length = 802
Score = 29.9 bits (64), Expect = 2.2
Identities = 17/50 (34%), Positives = 25/50 (50%)
Frame = -1
Query: 738 GHFWLVVQLVSAPSYDIADVSINYLTRWQCIKQSTLHFWRRWKLEYLHTL 589
G+ W+VV VSAP+ D+ +S W + + WKLE +H L
Sbjct: 47 GNKWIVVTSVSAPTEDVKRLS--SFPDWNLVVVADTKTPLDWKLENVHFL 94
>U80025-2|AAD32270.3| 806|Caenorhabditis elegans Hypothetical
protein F02C9.2 protein.
Length = 806
Score = 29.5 bits (63), Expect = 2.9
Identities = 15/53 (28%), Positives = 26/53 (49%)
Frame = -1
Query: 747 LTPGHFWLVVQLVSAPSYDIADVSINYLTRWQCIKQSTLHFWRRWKLEYLHTL 589
+ PG+ W+VV +S P+ D+ ++ T W + + W+LE H L
Sbjct: 54 IRPGNKWIVVTSISLPTEDVKRLA--SFTDWNLVVVADTKTPLDWELENAHFL 104
>U64599-2|ABB88205.1| 420|Caenorhabditis elegans Unidentified
vitellogenin-linkedtranscript protein 6, isoform b
protein.
Length = 420
Score = 29.5 bits (63), Expect = 2.9
Identities = 13/33 (39%), Positives = 21/33 (63%)
Frame = -1
Query: 246 KRTASTFLHRTRNIKKVYLIQKYCFSQTLLFNL 148
KR+ S++ TR++++V L C+S LFNL
Sbjct: 224 KRSRSSYQRVTRSVQRVVLFHLLCWSPFWLFNL 256
>U64599-1|AAB04560.3| 426|Caenorhabditis elegans Unidentified
vitellogenin-linkedtranscript protein 6, isoform a
protein.
Length = 426
Score = 29.5 bits (63), Expect = 2.9
Identities = 13/33 (39%), Positives = 21/33 (63%)
Frame = -1
Query: 246 KRTASTFLHRTRNIKKVYLIQKYCFSQTLLFNL 148
KR+ S++ TR++++V L C+S LFNL
Sbjct: 224 KRSRSSYQRVTRSVQRVVLFHLLCWSPFWLFNL 256
>Z98877-9|CAB63405.1| 348|Caenorhabditis elegans Hypothetical
protein Y69H2.8 protein.
Length = 348
Score = 28.7 bits (61), Expect = 5.0
Identities = 26/76 (34%), Positives = 35/76 (46%)
Frame = -2
Query: 326 PTKIPLS*STPSIGIMKNCNVPPSGRKKELRRRFCTARATLKKCI*FKNTVFPKLCYSTC 147
P+ +P ST S + C P SGR R+ A A L + F+ +V K+ Y+
Sbjct: 9 PSDLP---STSSNLLCTVCGAPASGR------RYGAAAACLACIVFFRRSVLRKIHYTCQ 59
Query: 146 ACVRVS*TPASRTVPR 99
A R T ASR V R
Sbjct: 60 ALGRCEITVASRCVCR 75
>AF022985-5|AAB69974.1| 299|Caenorhabditis elegans Hypothetical
protein T15B7.8 protein.
Length = 299
Score = 28.3 bits (60), Expect = 6.6
Identities = 15/50 (30%), Positives = 25/50 (50%)
Frame = -1
Query: 738 GHFWLVVQLVSAPSYDIADVSINYLTRWQCIKQSTLHFWRRWKLEYLHTL 589
G+ W+VV +S+P+ DI ++ W + + WKLE +H L
Sbjct: 129 GNKWIVVTTISSPTEDIKRLA--SFVDWNLVVVADTKTPLDWKLENVHFL 176
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,000,083
Number of Sequences: 27780
Number of extensions: 417287
Number of successful extensions: 884
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 864
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 884
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1903721438
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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