Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-0967
         (782 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292362-1|CAL23174.2|  398|Tribolium castaneum gustatory recept...    27   0.22 
DQ855492-1|ABH88179.1|  251|Tribolium castaneum chemosensory pro...    23   3.6  
AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    23   3.6  
AM292357-1|CAL23169.2|  355|Tribolium castaneum gustatory recept...    22   4.8  
EF592539-1|ABQ95985.1|  630|Tribolium castaneum beta-N-acetylglu...    21   8.4  

>AM292362-1|CAL23174.2|  398|Tribolium castaneum gustatory receptor
           candidate 41 protein.
          Length = 398

 Score = 26.6 bits (56), Expect = 0.22
 Identities = 13/64 (20%), Positives = 28/64 (43%)
 Frame = +1

Query: 583 LRRVTTLGYCVHNMSRSAENLIETPTTLLVGCINTPGLLPRTVLVPFHHRQVYLFDLNNG 762
           ++++   G  +     SA NLI+    +    ++  G+ P+T       +++ LF    G
Sbjct: 296 IKKIQIFGIMITKACMSASNLIQRTPNICYKLLSNLGIFPKTTNEQLLRKELLLFAEQMG 355

Query: 763 RSPV 774
           +  V
Sbjct: 356 QRQV 359


>DQ855492-1|ABH88179.1|  251|Tribolium castaneum chemosensory
           protein 6 protein.
          Length = 251

 Score = 22.6 bits (46), Expect = 3.6
 Identities = 9/21 (42%), Positives = 12/21 (57%)
 Frame = +3

Query: 261 PPAAATNVQAI*TTKYTHGPS 323
           PP  +T  +   TTK+T  PS
Sbjct: 162 PPTTSTTTRTTLTTKFTTKPS 182


>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
           candidate 46 protein.
          Length = 1451

 Score = 22.6 bits (46), Expect = 3.6
 Identities = 16/41 (39%), Positives = 20/41 (48%)
 Frame = +1

Query: 577 TLLRRVTTLGYCVHNMSRSAENLIETPTTLLVGCINTPGLL 699
           T    VT L YC   +    E LIE  T++L   IN P L+
Sbjct: 405 TFCTLVTALVYCSLAIFVLCELLIEGTTSIL---INVPSLI 442


>AM292357-1|CAL23169.2|  355|Tribolium castaneum gustatory receptor
           candidate 36 protein.
          Length = 355

 Score = 22.2 bits (45), Expect = 4.8
 Identities = 5/16 (31%), Positives = 11/16 (68%)
 Frame = -2

Query: 313 WVYFVVQIAWTLVAAA 266
           W Y ++   WT+++A+
Sbjct: 45  WTYLILLTTWTVISAS 60


>EF592539-1|ABQ95985.1|  630|Tribolium castaneum
           beta-N-acetylglucosaminidase FDL protein.
          Length = 630

 Score = 21.4 bits (43), Expect = 8.4
 Identities = 7/12 (58%), Positives = 8/12 (66%)
 Frame = +2

Query: 563 DRTWRPYCGE*P 598
           +R W  YCGE P
Sbjct: 354 ERPWSLYCGEPP 365


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 200,000
Number of Sequences: 336
Number of extensions: 4443
Number of successful extensions: 11
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 21168876
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)