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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-0967
         (782 letters)

Database: spombe 
           5004 sequences; 2,362,478 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SPBPB7E8.02 |||PSP1 family protein|Schizosaccharomyces pombe|chr...    28   1.3  
SPAC2F7.03c |pom1||DYRK family protein kinase Pom1|Schizosacchar...    27   4.0  
SPBC18E5.06 |rps21||40S ribosomal protein S21|Schizosaccharomyce...    26   5.3  
SPAC1805.15c |pub2||ubiquitin-protein ligase Pub2|Schizosaccharo...    26   7.0  
SPBC8D2.20c |sec31||COPII-coated vesicle component Sec31 |Schizo...    26   7.0  
SPCC737.09c |hmt1|SPCC74.08c|ATP-binding cassette-type vacuolar ...    26   7.0  
SPAC23H4.06 |gln1||glutamate-ammonia ligase Gln1|Schizosaccharom...    26   7.0  
SPAC22A12.10 |||diacylglycerol cholinephosphotranferase/ diacylg...    25   9.3  
SPBC27B12.03c |||lathosterol oxidase |Schizosaccharomyces pombe|...    25   9.3  
SPAC30D11.14c |||RNA-binding protein |Schizosaccharomyces pombe|...    25   9.3  

>SPBPB7E8.02 |||PSP1 family protein|Schizosaccharomyces pombe|chr
           2|||Manual
          Length = 749

 Score = 28.3 bits (60), Expect = 1.3
 Identities = 15/53 (28%), Positives = 26/53 (49%)
 Frame = +1

Query: 436 NWNRGRKCQISTSSHPYQLDASLISPSLSHLHCGSMRFEYQIGQNLATLLRRV 594
           +WN  +K   + SS      + L  PS  H+H  S+  E  +G ++A+   R+
Sbjct: 31  HWNPLKKIHSADSSRRRSTSSQLNQPSNYHMH-SSLHEEVSVGSSIASPSSRI 82


>SPAC2F7.03c |pom1||DYRK family protein kinase
           Pom1|Schizosaccharomyces pombe|chr 1|||Manual
          Length = 1087

 Score = 26.6 bits (56), Expect = 4.0
 Identities = 9/20 (45%), Positives = 14/20 (70%)
 Frame = -1

Query: 134 HGQVTCTNIKQHVLHIGLQT 75
           H Q+T +N+K +  H+G QT
Sbjct: 325 HSQITLSNVKNNHSHVGSQT 344


>SPBC18E5.06 |rps21||40S ribosomal protein S21|Schizosaccharomyces
           pombe|chr 2|||Manual
          Length = 87

 Score = 26.2 bits (55), Expect = 5.3
 Identities = 17/60 (28%), Positives = 34/60 (56%), Gaps = 5/60 (8%)
 Frame = -2

Query: 634 QILTCCEHSSLVWSLAAVGSPGSVLSGTRTSYS-----HSEGETETVISETHLTDKDDCL 470
           +I+   +H+S+  ++ AV + G  + G +T+Y+      S+GE++  I+   LT +D  L
Sbjct: 22  RIIQAKDHASVQINVCAVDAEGRQIPGEKTTYAISGFVRSKGESDDCIN--RLTTQDGLL 79


>SPAC1805.15c |pub2||ubiquitin-protein ligase
           Pub2|Schizosaccharomyces pombe|chr 1|||Manual
          Length = 671

 Score = 25.8 bits (54), Expect = 7.0
 Identities = 10/33 (30%), Positives = 21/33 (63%)
 Frame = -3

Query: 759 VVQVEQVHLPVMKWYKNSSG*KTRCVNAAHQES 661
           V  V++V+   +KW KN+   ++ C+N + +E+
Sbjct: 446 VKDVDEVYYESLKWIKNNDVDESLCLNFSVEEN 478


>SPBC8D2.20c |sec31||COPII-coated vesicle component Sec31
           |Schizosaccharomyces pombe|chr 2|||Manual
          Length = 1224

 Score = 25.8 bits (54), Expect = 7.0
 Identities = 8/26 (30%), Positives = 17/26 (65%)
 Frame = +1

Query: 265 QQLLLMSRLFEPQSIPMVHQGMEKGY 342
           +++  ++ L EP ++P +HQ  + GY
Sbjct: 784 EEIQRLTMLLEPHAVPPIHQIKQTGY 809


>SPCC737.09c |hmt1|SPCC74.08c|ATP-binding cassette-type vacuolar
           membrane transporter Hmt1|Schizosaccharomyces pombe|chr
           3|||Manual
          Length = 830

 Score = 25.8 bits (54), Expect = 7.0
 Identities = 12/41 (29%), Positives = 18/41 (43%)
 Frame = +2

Query: 53  WWPLVKHKSAVQCAARAVLCWCRSLVHGTERAHLPQEVDDV 175
           WWP    K+ V C    +L W   L+   +   LP+  D +
Sbjct: 83  WWPC---KTTVVCLILFLLFWIIVLISCADSKALPKNADSI 120


>SPAC23H4.06 |gln1||glutamate-ammonia ligase
           Gln1|Schizosaccharomyces pombe|chr 1|||Manual
          Length = 359

 Score = 25.8 bits (54), Expect = 7.0
 Identities = 12/27 (44%), Positives = 14/27 (51%)
 Frame = +3

Query: 498 VSDITVSVSPSLWEYEVRVPDRTEPGD 578
           +S I   V PS WEY+V      E GD
Sbjct: 191 ISGINAEVMPSQWEYQVGPCAGIEMGD 217


>SPAC22A12.10 |||diacylglycerol cholinephosphotranferase/
           diacylglycerol ethanolaminesphotranferase
           |Schizosaccharomyces pombe|chr 1|||Manual
          Length = 386

 Score = 25.4 bits (53), Expect = 9.3
 Identities = 10/26 (38%), Positives = 13/26 (50%)
 Frame = +2

Query: 662 LSWWAALTHLVFYPELFLYHFITGRC 739
           L W A  +    YP  F +HF+T  C
Sbjct: 265 LQWMAVFSLYAKYPAFFEHHFLTIFC 290


>SPBC27B12.03c |||lathosterol oxidase |Schizosaccharomyces pombe|chr
           2|||Manual
          Length = 329

 Score = 25.4 bits (53), Expect = 9.3
 Identities = 12/25 (48%), Positives = 13/25 (52%)
 Frame = -3

Query: 369 YFNYLP*H*IPFFHPLMDHGYTLWF 295
           Y   LP H  PFF PL  + Y L F
Sbjct: 206 YSQSLPYHMFPFFFPLNKYVYLLLF 230


>SPAC30D11.14c |||RNA-binding protein |Schizosaccharomyces pombe|chr
           1|||Manual
          Length = 534

 Score = 25.4 bits (53), Expect = 9.3
 Identities = 10/16 (62%), Positives = 12/16 (75%)
 Frame = -2

Query: 559 SGTRTSYSHSEGETET 512
           + +RTSY HSEG T T
Sbjct: 109 TSSRTSYDHSEGITST 124


  Database: spombe
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 2,362,478
  Number of sequences in database:  5004
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,384,406
Number of Sequences: 5004
Number of extensions: 72073
Number of successful extensions: 202
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 195
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 202
length of database: 2,362,478
effective HSP length: 71
effective length of database: 2,007,194
effective search space used: 379359666
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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