Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-0967
(782 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC032523-1|AAH32523.1| 676|Homo sapiens WD and tetratricopeptid... 37 0.094
AL663123-11|CAI14787.1| 676|Homo sapiens WD and tetratricopepti... 37 0.094
AL590640-1|CAH73549.1| 676|Homo sapiens WD and tetratricopeptid... 37 0.094
AK001734-1|BAA91868.1| 615|Homo sapiens protein ( Homo sapiens ... 37 0.094
AB028960-1|BAA82989.1| 488|Homo sapiens KIAA1037 protein protein. 37 0.094
U96136-1|AAC63103.1| 1225|Homo sapiens delta-catenin protein. 30 8.2
U81004-1|AAD00453.1| 1040|Homo sapiens GT24 protein. 30 8.2
U52351-1|AAB97957.1| 876|Homo sapiens arm-repeat protein NPRAP/... 30 8.2
AK001683-1|BAA91834.1| 738|Homo sapiens protein ( Homo sapiens ... 30 8.2
AB013805-1|BAA36163.1| 1225|Homo sapiens neural plakophilin-rela... 30 8.2
AB007859-1|BAA23695.4| 2982|Homo sapiens KIAA0399 protein protein. 30 8.2
>BC032523-1|AAH32523.1| 676|Homo sapiens WD and tetratricopeptide
repeats 1 protein.
Length = 676
Score = 36.7 bits (81), Expect = 0.094
Identities = 20/44 (45%), Positives = 27/44 (61%), Gaps = 2/44 (4%)
Frame = +3
Query: 108 YVGAGHLSMEPNEHTFPKKS--TTYVAFSNDGNELLVNLGSEQV 233
Y AGHL ++ ++ + TYV FS +G ELLVN+G EQV
Sbjct: 249 YYVAGHLPVKLPDYNNRLRVLVATYVTFSPNGTELLVNMGGEQV 292
>AL663123-11|CAI14787.1| 676|Homo sapiens WD and tetratricopeptide
repeats 1 protein.
Length = 676
Score = 36.7 bits (81), Expect = 0.094
Identities = 20/44 (45%), Positives = 27/44 (61%), Gaps = 2/44 (4%)
Frame = +3
Query: 108 YVGAGHLSMEPNEHTFPKKS--TTYVAFSNDGNELLVNLGSEQV 233
Y AGHL ++ ++ + TYV FS +G ELLVN+G EQV
Sbjct: 249 YYVAGHLPVKLPDYNNRLRVLVATYVTFSPNGTELLVNMGGEQV 292
>AL590640-1|CAH73549.1| 676|Homo sapiens WD and tetratricopeptide
repeats 1 protein.
Length = 676
Score = 36.7 bits (81), Expect = 0.094
Identities = 20/44 (45%), Positives = 27/44 (61%), Gaps = 2/44 (4%)
Frame = +3
Query: 108 YVGAGHLSMEPNEHTFPKKS--TTYVAFSNDGNELLVNLGSEQV 233
Y AGHL ++ ++ + TYV FS +G ELLVN+G EQV
Sbjct: 249 YYVAGHLPVKLPDYNNRLRVLVATYVTFSPNGTELLVNMGGEQV 292
>AK001734-1|BAA91868.1| 615|Homo sapiens protein ( Homo sapiens
cDNA FLJ10872 fis, clone NT2RP4001725, weakly similar to
GUANINE NUCLEOTIDE-BINDING PROTEIN BETA SUBUNIT. ).
Length = 615
Score = 36.7 bits (81), Expect = 0.094
Identities = 20/44 (45%), Positives = 27/44 (61%), Gaps = 2/44 (4%)
Frame = +3
Query: 108 YVGAGHLSMEPNEHTFPKKS--TTYVAFSNDGNELLVNLGSEQV 233
Y AGHL ++ ++ + TYV FS +G ELLVN+G EQV
Sbjct: 249 YYVAGHLPVKLPDYNNRLRVLVATYVTFSPNGTELLVNMGGEQV 292
>AB028960-1|BAA82989.1| 488|Homo sapiens KIAA1037 protein protein.
Length = 488
Score = 36.7 bits (81), Expect = 0.094
Identities = 20/44 (45%), Positives = 27/44 (61%), Gaps = 2/44 (4%)
Frame = +3
Query: 108 YVGAGHLSMEPNEHTFPKKS--TTYVAFSNDGNELLVNLGSEQV 233
Y AGHL ++ ++ + TYV FS +G ELLVN+G EQV
Sbjct: 140 YYVAGHLPVKLPDYNNRLRVLVATYVTFSPNGTELLVNMGGEQV 183
>U96136-1|AAC63103.1| 1225|Homo sapiens delta-catenin protein.
Length = 1225
Score = 30.3 bits (65), Expect = 8.2
Identities = 12/31 (38%), Positives = 20/31 (64%)
Frame = -2
Query: 616 EHSSLVWSLAAVGSPGSVLSGTRTSYSHSEG 524
+HS +++ A + PGS+ +G+R SYS G
Sbjct: 374 KHSQELYATATLQRPGSLAAGSRASYSSQHG 404
>U81004-1|AAD00453.1| 1040|Homo sapiens GT24 protein.
Length = 1040
Score = 30.3 bits (65), Expect = 8.2
Identities = 12/31 (38%), Positives = 20/31 (64%)
Frame = -2
Query: 616 EHSSLVWSLAAVGSPGSVLSGTRTSYSHSEG 524
+HS +++ A + PGS+ +G+R SYS G
Sbjct: 189 KHSQELYATATLQRPGSLAAGSRASYSSQHG 219
>U52351-1|AAB97957.1| 876|Homo sapiens arm-repeat protein
NPRAP/neurojungin protein.
Length = 876
Score = 30.3 bits (65), Expect = 8.2
Identities = 12/31 (38%), Positives = 20/31 (64%)
Frame = -2
Query: 616 EHSSLVWSLAAVGSPGSVLSGTRTSYSHSEG 524
+HS +++ A + PGS+ +G+R SYS G
Sbjct: 25 KHSQELYATATLQRPGSLAAGSRASYSSQHG 55
>AK001683-1|BAA91834.1| 738|Homo sapiens protein ( Homo sapiens
cDNA FLJ10821 fis, clone NT2RP4001057. ).
Length = 738
Score = 30.3 bits (65), Expect = 8.2
Identities = 15/46 (32%), Positives = 23/46 (50%)
Frame = -2
Query: 616 EHSSLVWSLAAVGSPGSVLSGTRTSYSHSEGETETVISETHLTDKD 479
+H+++ L VG P + GTR Y + E VI H T+K+
Sbjct: 552 KHTNIFTLLVLVGFPQVLCVGTRCVYMDNANEPHNVIILKHFTEKN 597
>AB013805-1|BAA36163.1| 1225|Homo sapiens neural plakophilin-related
arm-repeat protein (NPRAP) protein.
Length = 1225
Score = 30.3 bits (65), Expect = 8.2
Identities = 12/31 (38%), Positives = 20/31 (64%)
Frame = -2
Query: 616 EHSSLVWSLAAVGSPGSVLSGTRTSYSHSEG 524
+HS +++ A + PGS+ +G+R SYS G
Sbjct: 374 KHSQELYATATLQRPGSLAAGSRASYSSQHG 404
>AB007859-1|BAA23695.4| 2982|Homo sapiens KIAA0399 protein protein.
Length = 2982
Score = 30.3 bits (65), Expect = 8.2
Identities = 15/46 (32%), Positives = 23/46 (50%)
Frame = -2
Query: 616 EHSSLVWSLAAVGSPGSVLSGTRTSYSHSEGETETVISETHLTDKD 479
+H+++ L VG P + GTR Y + E VI H T+K+
Sbjct: 2259 KHTNIFTLLVLVGFPQVLCVGTRCVYMDNANEPHNVIILKHFTEKN 2304
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 126,670,272
Number of Sequences: 237096
Number of extensions: 2849689
Number of successful extensions: 10207
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 9915
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10207
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 9534535578
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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