Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-0966
         (806 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ876407-1|CAI45288.1|  590|Tribolium castaneum phosphatase prot...    24   1.6  
AM292368-1|CAL23180.2|  387|Tribolium castaneum gustatory recept...    23   2.9  
AM292347-1|CAL23159.2|  387|Tribolium castaneum gustatory recept...    23   2.9  
AM292327-1|CAL23139.2|  387|Tribolium castaneum gustatory recept...    23   2.9  
AF217810-1|AAF71998.1|  431|Tribolium castaneum fork head orthol...    23   2.9  
AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    23   3.8  
AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory recept...    22   6.6  

>AJ876407-1|CAI45288.1|  590|Tribolium castaneum phosphatase
           protein.
          Length = 590

 Score = 23.8 bits (49), Expect = 1.6
 Identities = 10/18 (55%), Positives = 12/18 (66%)
 Frame = -3

Query: 708 VTLLK*PEYTNCSLPVLE 655
           +TL+  PEY  C LP LE
Sbjct: 79  ITLVGGPEYAYCLLPPLE 96


>AM292368-1|CAL23180.2|  387|Tribolium castaneum gustatory receptor
           candidate 47 protein.
          Length = 387

 Score = 23.0 bits (47), Expect = 2.9
 Identities = 10/35 (28%), Positives = 21/35 (60%)
 Frame = -3

Query: 735 LPSSVNSKAVTLLK*PEYTNCSLPVLEHQDLIFVS 631
           +P++ NSK+  +L      NCS  ++ H  ++++S
Sbjct: 199 VPTASNSKSTKVLFKDVDRNCSAYIIAHYRVLWLS 233


>AM292347-1|CAL23159.2|  387|Tribolium castaneum gustatory receptor
           candidate 26 protein.
          Length = 387

 Score = 23.0 bits (47), Expect = 2.9
 Identities = 10/35 (28%), Positives = 21/35 (60%)
 Frame = -3

Query: 735 LPSSVNSKAVTLLK*PEYTNCSLPVLEHQDLIFVS 631
           +P++ NSK+  +L      NCS  ++ H  ++++S
Sbjct: 199 VPTASNSKSTKVLFKDVDRNCSAYIIAHYRVLWLS 233


>AM292327-1|CAL23139.2|  387|Tribolium castaneum gustatory receptor
           candidate 6 protein.
          Length = 387

 Score = 23.0 bits (47), Expect = 2.9
 Identities = 10/35 (28%), Positives = 21/35 (60%)
 Frame = -3

Query: 735 LPSSVNSKAVTLLK*PEYTNCSLPVLEHQDLIFVS 631
           +P++ NSK+  +L      NCS  ++ H  ++++S
Sbjct: 199 VPTASNSKSTKVLFKDVDRNCSAYIIAHYRVLWLS 233


>AF217810-1|AAF71998.1|  431|Tribolium castaneum fork head
           orthologue protein.
          Length = 431

 Score = 23.0 bits (47), Expect = 2.9
 Identities = 13/42 (30%), Positives = 17/42 (40%)
 Frame = +2

Query: 122 MSNLKEIYEKSAEFTAFYTGGDIQWTNDGLQMLCLCDEAIKV 247
           M  L EIY+   +   FY     +W N     L   D  +KV
Sbjct: 160 MLTLSEIYQFIMDLFPFYRQNQQRWQNSIRHSLSFNDCFVKV 201


>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
           candidate 46 protein.
          Length = 1451

 Score = 22.6 bits (46), Expect = 3.8
 Identities = 12/44 (27%), Positives = 23/44 (52%), Gaps = 1/44 (2%)
 Frame = -1

Query: 494 LLKQYFHLLNQRLTSQQVLY-GLISKFLVGLQFLCPTF*LGHFC 366
           L+ Q   ++   + S+Q+ +  L+  FLVG+ +    F + H C
Sbjct: 610 LITQTIFIICVIVQSEQIAWLHLLYIFLVGIMYAADVFYICHVC 653



 Score = 22.6 bits (46), Expect = 3.8
 Identities = 10/31 (32%), Positives = 15/31 (48%)
 Frame = -2

Query: 385  FN*ATFVCSNNTLITM*YFKCINLVIFCIFL 293
            F   TF CSN          C N+++ C++L
Sbjct: 1104 FGLITFGCSNRCFFPSKIRICWNVLLNCVYL 1134


>AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory receptor
           candidate 61 protein.
          Length = 670

 Score = 21.8 bits (44), Expect = 6.6
 Identities = 7/16 (43%), Positives = 11/16 (68%)
 Frame = -2

Query: 181 TCIKCSKLCTFLIYFF 134
           T +K +K C F+I F+
Sbjct: 314 TVLKTNKYCNFIILFY 329


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 188,571
Number of Sequences: 336
Number of extensions: 4327
Number of successful extensions: 15
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 21999028
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)