Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-0964
(398 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
CR533465-1|CAG38496.1| 105|Homo sapiens RPL36 protein. 126 2e-29
BC091508-1|AAH91508.1| 105|Homo sapiens ribosomal protein L36 p... 126 2e-29
BC004971-1|AAH04971.1| 105|Homo sapiens ribosomal protein L36 p... 126 2e-29
BC003052-1|AAH03052.1| 105|Homo sapiens ribosomal protein L36 p... 126 2e-29
AB061833-1|BAB79471.1| 105|Homo sapiens ribosomal protein L36 p... 126 2e-29
AB046410-1|BAB21256.1| 32|Homo sapiens ribosomal protein L36 p... 64 2e-10
L34600-1|AAA67038.1| 727|Homo sapiens initiation factor 2 protein. 30 2.5
AF495546-1|AAM70196.1| 727|Homo sapiens translation initiation ... 30 2.5
AF494407-1|AAM14617.1| 727|Homo sapiens mitochondrial translati... 30 2.5
BC008573-1|AAH08573.1| 48|Homo sapiens HIG2 protein protein. 28 9.9
AY008271-1|AAG16639.1| 1026|Homo sapiens helicase SMARCAD1 protein. 28 9.9
AF251120-1|AAG14422.1| 178|Homo sapiens interleukin-1-related p... 28 9.9
>CR533465-1|CAG38496.1| 105|Homo sapiens RPL36 protein.
Length = 105
Score = 126 bits (305), Expect = 2e-29
Identities = 67/99 (67%), Positives = 81/99 (81%), Gaps = 5/99 (5%)
Frame = +2
Query: 50 LKYPLAARVSQ----TKP-S*IRPARLKGLQTKHSKFVRDLVREVVGHAQYEKRAMELLK 214
L+YP+A +++ TK S R +R +G TKH+KFVRD++REV G A YE+RAMELLK
Sbjct: 3 LRYPMAVGLNKGHKVTKNVSKPRHSRRRGRLTKHTKFVRDMIREVCGFAPYERRAMELLK 62
Query: 215 VSKDKRALKFLKRRLGTHIRAKRKREELSNVLAQMRKAA 331
VSKDKRALKF+K+R+GTHIRAKRKREELSNVLA MRKAA
Sbjct: 63 VSKDKRALKFIKKRVGTHIRAKRKREELSNVLAAMRKAA 101
Score = 28.7 bits (61), Expect = 7.5
Identities = 12/18 (66%), Positives = 14/18 (77%)
Frame = +1
Query: 1 APRFEIAVGLRKGHKTTK 54
A R+ +AVGL KGHK TK
Sbjct: 2 ALRYPMAVGLNKGHKVTK 19
>BC091508-1|AAH91508.1| 105|Homo sapiens ribosomal protein L36
protein.
Length = 105
Score = 126 bits (305), Expect = 2e-29
Identities = 67/99 (67%), Positives = 81/99 (81%), Gaps = 5/99 (5%)
Frame = +2
Query: 50 LKYPLAARVSQ----TKP-S*IRPARLKGLQTKHSKFVRDLVREVVGHAQYEKRAMELLK 214
L+YP+A +++ TK S R +R +G TKH+KFVRD++REV G A YE+RAMELLK
Sbjct: 3 LRYPMAVGLNKGHKVTKNVSKPRHSRRRGRLTKHTKFVRDMIREVCGFAPYERRAMELLK 62
Query: 215 VSKDKRALKFLKRRLGTHIRAKRKREELSNVLAQMRKAA 331
VSKDKRALKF+K+R+GTHIRAKRKREELSNVLA MRKAA
Sbjct: 63 VSKDKRALKFIKKRVGTHIRAKRKREELSNVLAAMRKAA 101
Score = 28.7 bits (61), Expect = 7.5
Identities = 12/18 (66%), Positives = 14/18 (77%)
Frame = +1
Query: 1 APRFEIAVGLRKGHKTTK 54
A R+ +AVGL KGHK TK
Sbjct: 2 ALRYPMAVGLNKGHKVTK 19
>BC004971-1|AAH04971.1| 105|Homo sapiens ribosomal protein L36
protein.
Length = 105
Score = 126 bits (305), Expect = 2e-29
Identities = 67/99 (67%), Positives = 81/99 (81%), Gaps = 5/99 (5%)
Frame = +2
Query: 50 LKYPLAARVSQ----TKP-S*IRPARLKGLQTKHSKFVRDLVREVVGHAQYEKRAMELLK 214
L+YP+A +++ TK S R +R +G TKH+KFVRD++REV G A YE+RAMELLK
Sbjct: 3 LRYPMAVGLNKGHKVTKNVSKPRHSRRRGRLTKHTKFVRDMIREVCGFAPYERRAMELLK 62
Query: 215 VSKDKRALKFLKRRLGTHIRAKRKREELSNVLAQMRKAA 331
VSKDKRALKF+K+R+GTHIRAKRKREELSNVLA MRKAA
Sbjct: 63 VSKDKRALKFIKKRVGTHIRAKRKREELSNVLAAMRKAA 101
Score = 28.7 bits (61), Expect = 7.5
Identities = 12/18 (66%), Positives = 14/18 (77%)
Frame = +1
Query: 1 APRFEIAVGLRKGHKTTK 54
A R+ +AVGL KGHK TK
Sbjct: 2 ALRYPMAVGLNKGHKVTK 19
>BC003052-1|AAH03052.1| 105|Homo sapiens ribosomal protein L36
protein.
Length = 105
Score = 126 bits (305), Expect = 2e-29
Identities = 67/99 (67%), Positives = 81/99 (81%), Gaps = 5/99 (5%)
Frame = +2
Query: 50 LKYPLAARVSQ----TKP-S*IRPARLKGLQTKHSKFVRDLVREVVGHAQYEKRAMELLK 214
L+YP+A +++ TK S R +R +G TKH+KFVRD++REV G A YE+RAMELLK
Sbjct: 3 LRYPMAVGLNKGHKVTKNVSKPRHSRRRGRLTKHTKFVRDMIREVCGFAPYERRAMELLK 62
Query: 215 VSKDKRALKFLKRRLGTHIRAKRKREELSNVLAQMRKAA 331
VSKDKRALKF+K+R+GTHIRAKRKREELSNVLA MRKAA
Sbjct: 63 VSKDKRALKFIKKRVGTHIRAKRKREELSNVLAAMRKAA 101
Score = 28.7 bits (61), Expect = 7.5
Identities = 12/18 (66%), Positives = 14/18 (77%)
Frame = +1
Query: 1 APRFEIAVGLRKGHKTTK 54
A R+ +AVGL KGHK TK
Sbjct: 2 ALRYPMAVGLNKGHKVTK 19
>AB061833-1|BAB79471.1| 105|Homo sapiens ribosomal protein L36
protein.
Length = 105
Score = 126 bits (305), Expect = 2e-29
Identities = 67/99 (67%), Positives = 81/99 (81%), Gaps = 5/99 (5%)
Frame = +2
Query: 50 LKYPLAARVSQ----TKP-S*IRPARLKGLQTKHSKFVRDLVREVVGHAQYEKRAMELLK 214
L+YP+A +++ TK S R +R +G TKH+KFVRD++REV G A YE+RAMELLK
Sbjct: 3 LRYPMAVGLNKGHKVTKNVSKPRHSRRRGRLTKHTKFVRDMIREVCGFAPYERRAMELLK 62
Query: 215 VSKDKRALKFLKRRLGTHIRAKRKREELSNVLAQMRKAA 331
VSKDKRALKF+K+R+GTHIRAKRKREELSNVLA MRKAA
Sbjct: 63 VSKDKRALKFIKKRVGTHIRAKRKREELSNVLAAMRKAA 101
Score = 28.7 bits (61), Expect = 7.5
Identities = 12/18 (66%), Positives = 14/18 (77%)
Frame = +1
Query: 1 APRFEIAVGLRKGHKTTK 54
A R+ +AVGL KGHK TK
Sbjct: 2 ALRYPMAVGLNKGHKVTK 19
>AB046410-1|BAB21256.1| 32|Homo sapiens ribosomal protein L36
protein.
Length = 32
Score = 63.7 bits (148), Expect = 2e-10
Identities = 29/32 (90%), Positives = 32/32 (100%)
Frame = +2
Query: 209 LKVSKDKRALKFLKRRLGTHIRAKRKREELSN 304
LKVSKDKRALKF+K+R+GTHIRAKRKREELSN
Sbjct: 1 LKVSKDKRALKFIKKRVGTHIRAKRKREELSN 32
>L34600-1|AAA67038.1| 727|Homo sapiens initiation factor 2 protein.
Length = 727
Score = 30.3 bits (65), Expect = 2.5
Identities = 23/71 (32%), Positives = 34/71 (47%)
Frame = +2
Query: 131 KHSKFVRDLVREVVGHAQYEKRAMELLKVSKDKRALKFLKRRLGTHIRAKRKREELSNVL 310
K K RE GH ++KR++ L+FL+R+ ++ K KRE SNVL
Sbjct: 468 KEHKEAHQKAREKYGHLLWKKRSI-----------LRFLERKEQIPLKPKEKRERDSNVL 516
Query: 311 AQMRKAARPGS 343
+ + K GS
Sbjct: 517 SVIIKGDVDGS 527
>AF495546-1|AAM70196.1| 727|Homo sapiens translation initiation
factor 2 protein.
Length = 727
Score = 30.3 bits (65), Expect = 2.5
Identities = 23/71 (32%), Positives = 34/71 (47%)
Frame = +2
Query: 131 KHSKFVRDLVREVVGHAQYEKRAMELLKVSKDKRALKFLKRRLGTHIRAKRKREELSNVL 310
K K RE GH ++KR++ L+FL+R+ ++ K KRE SNVL
Sbjct: 468 KEHKEAHQKAREKYGHLLWKKRSI-----------LRFLERKEQIPLKPKEKRERDSNVL 516
Query: 311 AQMRKAARPGS 343
+ + K GS
Sbjct: 517 SVIIKGDVDGS 527
>AF494407-1|AAM14617.1| 727|Homo sapiens mitochondrial
translation-initiation factor 2 protein.
Length = 727
Score = 30.3 bits (65), Expect = 2.5
Identities = 23/71 (32%), Positives = 34/71 (47%)
Frame = +2
Query: 131 KHSKFVRDLVREVVGHAQYEKRAMELLKVSKDKRALKFLKRRLGTHIRAKRKREELSNVL 310
K K RE GH ++KR++ L+FL+R+ ++ K KRE SNVL
Sbjct: 468 KEHKEAHQKAREKYGHLLWKKRSI-----------LRFLERKEQIPLKPKEKRERDSNVL 516
Query: 311 AQMRKAARPGS 343
+ + K GS
Sbjct: 517 SVIIKGDVDGS 527
>BC008573-1|AAH08573.1| 48|Homo sapiens HIG2 protein protein.
Length = 48
Score = 28.3 bits (60), Expect = 9.9
Identities = 12/38 (31%), Positives = 22/38 (57%)
Frame = +2
Query: 191 KRAMELLKVSKDKRALKFLKRRLGTHIRAKRKREELSN 304
+R+ + VS+D+ A+ L H++ K+KR+ L N
Sbjct: 8 RRSFAFVAVSRDRTAVPSLGHSARLHLKKKKKRKSLFN 45
>AY008271-1|AAG16639.1| 1026|Homo sapiens helicase SMARCAD1 protein.
Length = 1026
Score = 28.3 bits (60), Expect = 9.9
Identities = 20/63 (31%), Positives = 31/63 (49%), Gaps = 1/63 (1%)
Frame = +2
Query: 146 VRDLVREVVGHAQYEKRAMELLKVSKDKRALKF-LKRRLGTHIRAKRKREELSNVLAQMR 322
+R + EV+ +K +EL +S+ + L L RL I K E+ NV+ Q+R
Sbjct: 720 LRRVKEEVLKQLPPKKDRIELCAMSEKQEQLYLGLFNRLKKSINNLEKNTEMCNVMMQLR 779
Query: 323 KAA 331
K A
Sbjct: 780 KMA 782
>AF251120-1|AAG14422.1| 178|Homo sapiens interleukin-1-related
protein short isoform protein.
Length = 178
Score = 28.3 bits (60), Expect = 9.9
Identities = 23/75 (30%), Positives = 34/75 (45%)
Frame = +2
Query: 113 LKGLQTKHSKFVRDLVREVVGHAQYEKRAMELLKVSKDKRALKFLKRRLGTHIRAKRKRE 292
L + H+K L + A EK + LL VSK + L K + +H + K+E
Sbjct: 40 LPAMNFVHTKIFFALASSL-SSASAEKGSPILLGVSKGEFCLYCDKDKGQSHPSLQLKKE 98
Query: 293 ELSNVLAQMRKAARP 337
+L + AQ A RP
Sbjct: 99 KLMKLAAQKESARRP 113
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 52,107,533
Number of Sequences: 237096
Number of extensions: 943921
Number of successful extensions: 2147
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 2100
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2146
length of database: 76,859,062
effective HSP length: 82
effective length of database: 57,417,190
effective search space used: 2870859500
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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