Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-0962
         (643 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q22KX7 Cluster: Putative uncharacterized protein; n=1; ...    35   1.5  
UniRef50_Q6LF57 Cluster: Putative uncharacterized protein; n=1; ...    35   1.9  
UniRef50_A0NE41 Cluster: ENSANGP00000030074; n=1; Anopheles gamb...    34   2.5  
UniRef50_Q9MG95 Cluster: Ribosomal protein S19; n=2; Synurophyce...    33   7.7  

>UniRef50_Q22KX7 Cluster: Putative uncharacterized protein; n=1;
           Tetrahymena thermophila SB210|Rep: Putative
           uncharacterized protein - Tetrahymena thermophila SB210
          Length = 1090

 Score = 35.1 bits (77), Expect = 1.5
 Identities = 34/116 (29%), Positives = 51/116 (43%), Gaps = 2/116 (1%)
 Frame = -2

Query: 513 VRRVFILLFLHFRFDNDRPYQSSYTFIILYQILFLK*NLYLLDFNITHTRSYEPXXXXXX 334
           + ++  L + H  FD  R  QS Y  II   I +     YL+  +I HT+  E       
Sbjct: 361 IEQMIDLSYQHDIFDYQRN-QSLYKVIINPIIGYDDIPKYLIKNSINHTQQLEYVYLQIN 419

Query: 333 XXXXXMKVAQVDIVCFV*CFRVFYSVSIATYLKEIKNYIYS--THKGRALQNIFQV 172
                   AQ  I   +  F +F+ ++   Y+K+IKN IY    H  R L+ I Q+
Sbjct: 420 ILSDEDLRAQ-GIEIAIGVFSLFFIIATVYYIKQIKNLIYQPIIHLTRILKQIDQL 474


>UniRef50_Q6LF57 Cluster: Putative uncharacterized protein; n=1;
            Plasmodium falciparum 3D7|Rep: Putative uncharacterized
            protein - Plasmodium falciparum (isolate 3D7)
          Length = 2461

 Score = 34.7 bits (76), Expect = 1.9
 Identities = 33/112 (29%), Positives = 55/112 (49%), Gaps = 2/112 (1%)
 Frame = -1

Query: 448  FLYFHYF-ISDLIPKIKFIFTRF*YNTHEVL*TIDNTYYYAVNHNESCSSRYCVFCLMFS 272
            +L+FH   I  L  K+K I TR+ Y  HE+L     T++   N NE+C            
Sbjct: 790  YLHFHIKKIKKLYNKMKIIMTRYKYIYHEIL-----TFFVFSNDNENC------------ 832

Query: 271  CILFSVYSDLLKRNKKLYL*HTQRKGLTKYISSLKSYIKF-HILLFEFLLAI 119
              +   + DL+K+NKK        + ++KY+  L++  +F + +L+ F L I
Sbjct: 833  --VIPAHLDLIKKNKKDKENEHNNRIISKYLHILQNDDQFLYKVLYYFNLFI 882


>UniRef50_A0NE41 Cluster: ENSANGP00000030074; n=1; Anopheles gambiae
           str. PEST|Rep: ENSANGP00000030074 - Anopheles gambiae
           str. PEST
          Length = 120

 Score = 34.3 bits (75), Expect = 2.5
 Identities = 18/44 (40%), Positives = 24/44 (54%)
 Frame = -2

Query: 537 LYCNTHIIVRRVFILLFLHFRFDNDRPYQSSYTFIILYQILFLK 406
           ++CN  +    + +LLFLHF F N   Y     F+ILY  LF K
Sbjct: 24  VWCNVPVFWLIILLLLFLHFVFLN--TYYVICVFVILYSYLFSK 65


>UniRef50_Q9MG95 Cluster: Ribosomal protein S19; n=2;
           Synurophyceae|Rep: Ribosomal protein S19 - Chrysodidymus
           synuroideus
          Length = 92

 Score = 32.7 bits (71), Expect = 7.7
 Identities = 17/56 (30%), Positives = 29/56 (51%)
 Frame = +2

Query: 452 WYGLSLSNLKCKNNKIKTRRTIIWVLQYSYSIPRGVVNRVMFLREVSDFNKINIER 619
           W G  +     K N I T++  IW    + +IP  ++N+ +F+   + F K+NI R
Sbjct: 6   WKGKYIPRFLLKKNFILTKKNKIW--SRNSAIPFFLLNKDVFVHNGNSFKKLNISR 59


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 564,247,265
Number of Sequences: 1657284
Number of extensions: 10724128
Number of successful extensions: 20542
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 19760
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 20531
length of database: 575,637,011
effective HSP length: 97
effective length of database: 414,880,463
effective search space used: 48126133708
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)