Bombyx BLAST Result against spombe

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-0962
         (643 letters)

Database: spombe 
           5004 sequences; 2,362,478 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SPBC577.13 |syj2||inositol-polyphosphate 5-phosphatase |Schizosa...    27   2.3  
SPAC4F10.16c |||P-type ATPase |Schizosaccharomyces pombe|chr 1||...    27   3.0  
SPBC1718.04 |||glycerol-3-phosphate O-acyltransferase |Schizosac...    26   4.0  
SPBC16G5.17 |||transcription factor, zf-fungal binuclear cluster...    26   4.0  
SPAPYUG7.05 |||delta-1-pyrroline-5-carboxylate reductase |Schizo...    25   7.0  
SPAC32A11.02c |||conserved fungal protein|Schizosaccharomyces po...    25   7.0  
SPAC13G6.10c |||O-glucosyl hydrolase |Schizosaccharomyces pombe|...    25   7.0  

>SPBC577.13 |syj2||inositol-polyphosphate 5-phosphatase
           |Schizosaccharomyces pombe|chr 2|||Manual
          Length = 889

 Score = 27.1 bits (57), Expect = 2.3
 Identities = 13/38 (34%), Positives = 19/38 (50%)
 Frame = -3

Query: 122 NMFFFFNVRFYGFPEGYQPKHINTKSVCSLF*NTKALV 9
           +M     V  YG  + Y P  I+  S CS+F  T+ +V
Sbjct: 248 SMSIISKVSSYGSRQTYPPSGIDDSSYCSMFVETEFIV 285


>SPAC4F10.16c |||P-type ATPase |Schizosaccharomyces pombe|chr
            1|||Manual
          Length = 1367

 Score = 26.6 bits (56), Expect = 3.0
 Identities = 11/30 (36%), Positives = 18/30 (60%)
 Frame = -2

Query: 501  FILLFLHFRFDNDRPYQSSYTFIILYQILF 412
            FIL +  F  + D  Y   YT+++L+ +LF
Sbjct: 1105 FILFWYQFYNEFDGNYIFDYTYVMLFNLLF 1134


>SPBC1718.04 |||glycerol-3-phosphate O-acyltransferase
           |Schizosaccharomyces pombe|chr 2|||Manual
          Length = 675

 Score = 26.2 bits (55), Expect = 4.0
 Identities = 15/39 (38%), Positives = 21/39 (53%), Gaps = 5/39 (12%)
 Frame = -3

Query: 530 VTPIL*CAVSLFCYFYISGLTTIDHTSL-----PILSLF 429
           +TPIL    +L C +YI     I H+S+     PI+S F
Sbjct: 454 MTPILYSFYALLCCYYIYSYKLIPHSSIFVYTVPIISTF 492


>SPBC16G5.17 |||transcription factor, zf-fungal binuclear cluster
           type |Schizosaccharomyces pombe|chr 2|||Manual
          Length = 560

 Score = 26.2 bits (55), Expect = 4.0
 Identities = 13/45 (28%), Positives = 23/45 (51%)
 Frame = -2

Query: 273 RVFYSVSIATYLKEIKNYIYSTHKGRALQNIFQV*NPILNFIFYY 139
           R+ Y ++I T +  ++  +   H     QN+FQV   I +F F +
Sbjct: 511 RIHYVLNIYTTINSVEPELSEDHGDLDDQNLFQVFTDIFDFNFNF 555


>SPAPYUG7.05 |||delta-1-pyrroline-5-carboxylate reductase
          |Schizosaccharomyces pombe|chr 1|||Manual
          Length = 282

 Score = 25.4 bits (53), Expect = 7.0
 Identities = 9/19 (47%), Positives = 13/19 (68%)
 Frame = -1

Query: 73 ISQNILIQNRFVACFKTPR 17
          +S  I+I N+F AC K P+
Sbjct: 31 VSDEIIIPNKFYACVKFPK 49


>SPAC32A11.02c |||conserved fungal protein|Schizosaccharomyces
           pombe|chr 1|||Manual
          Length = 851

 Score = 25.4 bits (53), Expect = 7.0
 Identities = 9/17 (52%), Positives = 12/17 (70%)
 Frame = +1

Query: 295 NIYLSNFHCDLQHNNMY 345
           N++LSN  CDL+  N Y
Sbjct: 490 NVHLSNIQCDLKDVNYY 506


>SPAC13G6.10c |||O-glucosyl hydrolase |Schizosaccharomyces pombe|chr
           1|||Manual
          Length = 530

 Score = 25.4 bits (53), Expect = 7.0
 Identities = 9/29 (31%), Positives = 16/29 (55%)
 Frame = +2

Query: 452 WYGLSLSNLKCKNNKIKTRRTIIWVLQYS 538
           WYG+  SNL+   N +      IW+ +++
Sbjct: 432 WYGIDFSNLQDYINSLANYGLPIWLTEFA 460


  Database: spombe
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 2,362,478
  Number of sequences in database:  5004
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,480,194
Number of Sequences: 5004
Number of extensions: 50804
Number of successful extensions: 103
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 102
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 103
length of database: 2,362,478
effective HSP length: 70
effective length of database: 2,012,198
effective search space used: 287744314
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)