Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-0961
(608 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
03_06_0480 + 34218403-34218405,34219071-34219127,34220047-342203... 109 2e-24
02_05_0221 - 26938764-26938914,26940039-26940361,26940391-26940393 101 4e-22
12_02_1198 - 26922570-26922720,26922893-26923158,26923646-26923666 100 1e-21
07_03_0397 + 17686852-17686888,17687452-17687701,17688168-17688318 95 4e-20
05_01_0103 + 686770-687017,687120-687270 95 4e-20
03_06_0479 + 34217170-34217172,34217337-34217786 93 1e-19
03_06_0174 - 32141956-32141985,32143658-32144452,32147645-321477... 93 1e-19
04_04_0752 - 27791126-27791167,27791792-27791863,27792771-277928... 91 6e-19
10_08_0658 - 19642103-19642259,19642831-19643102,19643346-19643378 73 2e-13
07_02_0007 - 11675832-11675988,11676719-11676975,11676989-11677084 54 9e-08
03_01_0423 + 3240224-3240394,3241464-3241628,3242322-3242339,324... 29 2.2
08_02_0728 + 20461724-20461758,20462227-20462298,20462792-204628... 29 2.9
04_03_0767 + 19389337-19389381,19390586-19390643,19390720-193907... 29 2.9
12_02_0796 + 23224357-23224427,23225714-23225810,23226335-232271... 28 5.0
03_05_1112 + 30488678-30488806,30489047-30489228,30489310-304895... 28 5.0
>03_06_0480 +
34218403-34218405,34219071-34219127,34220047-34220312,
34220402-34220552
Length = 158
Score = 109 bits (261), Expect = 2e-24
Identities = 51/143 (35%), Positives = 88/143 (61%), Gaps = 1/143 (0%)
Frame = +3
Query: 84 ASGVTVSDACKTTYEEIKKDKKHRYVVFYIRDE-KQIDVETVGERNAEYEQFLEDLQKGG 260
+SGV + D CK + E++ + HR++ F + ++ K+I V+ +G+R YE F L +G
Sbjct: 24 SSGVAIHDDCKLKFNELQSKRMHRFITFMMDNKGKEIIVDKIGDRTTSYEDFTSSLPEG- 82
Query: 261 TGECRYGLFDFEYTHQCQGTSEASKKQKLFLMLWCPDTAKVKKKMLYFSLFDALKKSLVG 440
+CR+ ++DF++ T+E K ++F +LW PD AKV+ KMLY S + KK L G
Sbjct: 83 --DCRFAIYDFDFL-----TAEDVPKSRIFYILWSPDNAKVRSKMLYASSNERFKKELNG 135
Query: 441 VQKYIQATDLSEAFYEAVQEKLR 509
+Q +QATD E +A++++++
Sbjct: 136 IQLEVQATDAGEISLDALKDRVK 158
>02_05_0221 - 26938764-26938914,26940039-26940361,26940391-26940393
Length = 158
Score = 101 bits (242), Expect = 4e-22
Identities = 53/141 (37%), Positives = 82/141 (58%), Gaps = 1/141 (0%)
Frame = +3
Query: 84 ASGVTVSDACKTTYEEIKKDKKHRYVVFYIRDE-KQIDVETVGERNAEYEQFLEDLQKGG 260
ASG+ V D CK + E+K + R++VF I ++ +Q+ V+ +G+ Y+ F L
Sbjct: 24 ASGMAVCDECKLKFLELKAKRSFRFIVFKINEKVQQVVVDRLGQPGESYDDFTACLP--- 80
Query: 261 TGECRYGLFDFEYTHQCQGTSEASKKQKLFLMLWCPDTAKVKKKMLYFSLFDALKKSLVG 440
ECRY +FDF++ T E +K K+F + W PDT++V+ KMLY S D K+ L G
Sbjct: 81 ADECRYAVFDFDFV-----TDENCQKSKIFFISWAPDTSRVRSKMLYASSKDRFKRELDG 135
Query: 441 VQKYIQATDLSEAFYEAVQEK 503
+Q +QATD SE + V+ +
Sbjct: 136 IQVELQATDPSEMSMDIVKSR 156
>12_02_1198 - 26922570-26922720,26922893-26923158,26923646-26923666
Length = 145
Score = 100 bits (239), Expect = 1e-21
Identities = 49/141 (34%), Positives = 84/141 (59%), Gaps = 1/141 (0%)
Frame = +3
Query: 84 ASGVTVSDACKTTYEEIKKDKKHRYVVFYIRDE-KQIDVETVGERNAEYEQFLEDLQKGG 260
+SG+ V+ CK T+ E+++ K HRYV+F I D+ K++ VE G ++ F++ L +
Sbjct: 11 SSGIGVAAECKQTFLELQRKKSHRYVIFKIDDKCKEVVVEKTGSSTESFDDFMDSLPES- 69
Query: 261 TGECRYGLFDFEYTHQCQGTSEASKKQKLFLMLWCPDTAKVKKKMLYFSLFDALKKSLVG 440
+CRY ++DF++ T E +K K+F + W P ++++ KMLY + + ++ L G
Sbjct: 70 --DCRYAIYDFDFV-----TEENCQKSKIFFVAWSPSVSRIRAKMLYATSKERFRRELDG 122
Query: 441 VQKYIQATDLSEAFYEAVQEK 503
V IQATD SE E ++E+
Sbjct: 123 VHYEIQATDPSELDIELLRER 143
>07_03_0397 + 17686852-17686888,17687452-17687701,17688168-17688318
Length = 145
Score = 95.1 bits (226), Expect = 4e-20
Identities = 51/139 (36%), Positives = 78/139 (56%), Gaps = 1/139 (0%)
Frame = +3
Query: 90 GVTVSDACKTTYEEIKKDKKHRYVVFYIRDEK-QIDVETVGERNAEYEQFLEDLQKGGTG 266
G+ V+D CK ++E+K + R++VF I D+ +I VE +G+ YE F L
Sbjct: 13 GLAVNDECKFKFQELKTRRGFRFIVFKIDDKAMEIKVERLGQTAEGYEDFAATLP---AD 69
Query: 267 ECRYGLFDFEYTHQCQGTSEASKKQKLFLMLWCPDTAKVKKKMLYFSLFDALKKSLVGVQ 446
ECRY ++D ++ T E +K K+F W PDTA+ + KMLY S D ++ L G+Q
Sbjct: 70 ECRYAVYDLDFV-----TDENCQKSKIFFFSWSPDTARTRSKMLYASSKDRFRRELDGIQ 124
Query: 447 KYIQATDLSEAFYEAVQEK 503
IQATD SE + ++ +
Sbjct: 125 CEIQATDPSEMSLDIIRAR 143
>05_01_0103 + 686770-687017,687120-687270
Length = 132
Score = 95.1 bits (226), Expect = 4e-20
Identities = 47/136 (34%), Positives = 79/136 (58%), Gaps = 1/136 (0%)
Frame = +3
Query: 93 VTVSDACKTTYEEIKKDKKHRYVVFYIRDEKQ-IDVETVGERNAEYEQFLEDLQKGGTGE 269
+ V D CK + E+K + +R++++ I ++K+ + VE VGE Y+ F L E
Sbjct: 1 MAVDDECKLKFLELKAKRTYRFIIYKIDEKKKMVVVEKVGEPVLNYDDFAASLP---ANE 57
Query: 270 CRYGLFDFEYTHQCQGTSEASKKQKLFLMLWCPDTAKVKKKMLYFSLFDALKKSLVGVQK 449
CRY +FD+++ T E +K K+F + W PDT++V+ KM+Y S D K+ L G+Q
Sbjct: 58 CRYAIFDYDFV-----TEENCQKSKIFFIAWSPDTSRVRSKMIYASSKDRFKRELDGIQV 112
Query: 450 YIQATDLSEAFYEAVQ 497
+QATD +E + ++
Sbjct: 113 ELQATDPTEVGLDVIR 128
>03_06_0479 + 34217170-34217172,34217337-34217786
Length = 150
Score = 93.5 bits (222), Expect = 1e-19
Identities = 52/145 (35%), Positives = 83/145 (57%), Gaps = 7/145 (4%)
Frame = +3
Query: 87 SGVTVSDACKTTYEEIKKDKKHRYVVFYIRDE-KQIDVETVGERNAEYEQFLEDLQKGGT 263
SGV VS+ CK ++E++ + HR+VVF I D +Q+ V+ VG R+A +++ L G
Sbjct: 6 SGVAVSEECKARFQELRAGRAHRFVVFKIDDAMRQVVVDRVGPRDAGFDELTASLPADG- 64
Query: 264 GECRYGLFDFEYT-HQCQGTSEASK-----KQKLFLMLWCPDTAKVKKKMLYFSLFDALK 425
CRY ++D ++T T+ A + + K+F + W P A V+ KM+Y S + K
Sbjct: 65 --CRYAVYDHDFTVSDATATAAAGEGGEAPRSKIFFVSWSPAAADVRSKMVYASSNEGFK 122
Query: 426 KSLVGVQKYIQATDLSEAFYEAVQE 500
K L GVQ +QATD SE + +++
Sbjct: 123 KELDGVQIDLQATDPSELTLDVLKD 147
>03_06_0174 -
32141956-32141985,32143658-32144452,32147645-32147759,
32148134-32148399,32150193-32150213
Length = 408
Score = 93.5 bits (222), Expect = 1e-19
Identities = 51/141 (36%), Positives = 80/141 (56%), Gaps = 1/141 (0%)
Frame = +3
Query: 57 FLRE*HQKMASGVTVSDACKTTYEEIKKDKKHRYVVFYIRD-EKQIDVETVGERNAEYEQ 233
F+R H +SG+ V+ + T+ E++ K RYV+F I + +KQ+ VE G Y+
Sbjct: 3 FMRS-HSNASSGMGVAPDIRDTFLELQMKKAFRYVIFKIEEKQKQVVVEKTGATTESYDD 61
Query: 234 FLEDLQKGGTGECRYGLFDFEYTHQCQGTSEASKKQKLFLMLWCPDTAKVKKKMLYFSLF 413
FL L + +CRY L+DF++ T E +K K+F + W P T++++ KMLY +
Sbjct: 62 FLASLPEN---DCRYALYDFDFV-----TGENVQKSKIFFIAWSPSTSRIRAKMLYSTSK 113
Query: 414 DALKKSLVGVQKYIQATDLSE 476
D +K+ L G IQATD +E
Sbjct: 114 DRIKQELDGFHYEIQATDPTE 134
>04_04_0752 -
27791126-27791167,27791792-27791863,27792771-27792855,
27792971-27793236,27794117-27794301,27794925-27795018,
27795193-27795284,27795401-27795539,27796101-27796385
Length = 419
Score = 91.1 bits (216), Expect = 6e-19
Identities = 45/122 (36%), Positives = 70/122 (57%), Gaps = 1/122 (0%)
Frame = +3
Query: 84 ASGVTVSDACKTTYEEIKKDKKHRYVVFYIRDE-KQIDVETVGERNAEYEQFLEDLQKGG 260
ASG+ V D CK ++E+K + R++ F I + +Q+ V+ +G+ Y+ F +
Sbjct: 269 ASGMAVGDECKLKFQELKSKRSFRFITFKIDERTQQVVVDRLGQPGDTYDDFTASMP--- 325
Query: 261 TGECRYGLFDFEYTHQCQGTSEASKKQKLFLMLWCPDTAKVKKKMLYFSLFDALKKSLVG 440
ECRY +FDF++ T E +K K+F + W PDT+KV+ KMLY S D K+ L G
Sbjct: 326 ASECRYAVFDFDFV-----TDENCQKSKIFFISWSPDTSKVRSKMLYASSKDRFKRELDG 380
Query: 441 VQ 446
+Q
Sbjct: 381 IQ 382
>10_08_0658 - 19642103-19642259,19642831-19643102,19643346-19643378
Length = 153
Score = 72.5 bits (170), Expect = 2e-13
Identities = 40/142 (28%), Positives = 71/142 (50%), Gaps = 1/142 (0%)
Frame = +3
Query: 93 VTVSDACKTTYEEIKKDKKHRYVVFYIRDEKQ-IDVETVGERNAEYEQFLEDLQKGGTGE 269
+ V + K+ + E+K+ K HRYV+F I D ++ I VE G Y+ F L +
Sbjct: 20 IEVPEKSKSAFWELKRRKVHRYVIFKIDDRREEIVVEKTGAPGESYDDFTASLP---ADD 76
Query: 270 CRYGLFDFEYTHQCQGTSEASKKQKLFLMLWCPDTAKVKKKMLYFSLFDALKKSLVGVQK 449
CRY ++D ++ + + +K K+F + W P ++++ K +Y + + L GV
Sbjct: 77 CRYAVYDLDFV-----SDDNCRKSKIFFISWSPSVSRIRAKTIYAVSRNQFRHELDGVHF 131
Query: 450 YIQATDLSEAFYEAVQEKLRAT 515
IQATD + E ++ + T
Sbjct: 132 EIQATDPDDMDLEVLRGRANRT 153
>07_02_0007 - 11675832-11675988,11676719-11676975,11676989-11677084
Length = 169
Score = 54.0 bits (124), Expect = 9e-08
Identities = 40/142 (28%), Positives = 64/142 (45%), Gaps = 1/142 (0%)
Frame = +3
Query: 93 VTVSDACKTTYEEIKKDKKHRYVVFYIRDEKQ-IDVETVGERNAEYEQFLEDLQKGGTGE 269
+ V + K+ + E+ + K HRYV+F I D ++ I VE G Y+ F L +
Sbjct: 40 IEVPEKSKSAFWELMRRKVHRYVIFKIDDRREEIVVEKTGAPWESYDDFTASLP----AD 95
Query: 270 CRYGLFDFEYTHQCQGTSEASKKQKLFLMLWCPDTAKVKKKMLYFSLFDALKKSLVGVQK 449
Y L DF C +K K+F + W P + ++ K +Y + + L GV
Sbjct: 96 AVYDL-DFVSDDNC-------RKSKIFFISWSPSLSCIRAKTIYAVWRNQFRHELDGVHF 147
Query: 450 YIQATDLSEAFYEAVQEKLRAT 515
IQATD + E ++ + T
Sbjct: 148 EIQATDPDDMDLEVLRGRANRT 169
>03_01_0423 + 3240224-3240394,3241464-3241628,3242322-3242339,
3242494-3242836,3244138-3248540,3248928-3249107,
3249108-3250892,3251055-3252173
Length = 2727
Score = 29.5 bits (63), Expect = 2.2
Identities = 20/52 (38%), Positives = 28/52 (53%), Gaps = 3/52 (5%)
Frame = +3
Query: 363 CPDTAKVKKKMLYFSLFDALKKSLV---GVQKYIQATDLSEAFYEAVQEKLR 509
C D A + +L SL DA K+L QK+IQATD +E ++E+ R
Sbjct: 1789 CAD-ASISTLILENSLVDARDKNLALFNECQKFIQATDSAEVLIAQLKEEAR 1839
>08_02_0728 +
20461724-20461758,20462227-20462298,20462792-20462825,
20462874-20463079,20463173-20463224,20463325-20463438,
20463521-20463574,20464464-20464538,20464645-20464749
Length = 248
Score = 29.1 bits (62), Expect = 2.9
Identities = 19/64 (29%), Positives = 30/64 (46%)
Frame = +3
Query: 252 KGGTGECRYGLFDFEYTHQCQGTSEASKKQKLFLMLWCPDTAKVKKKMLYFSLFDALKKS 431
+GGT + YT C + A ++Q L+ CP A ++ K + FSLF K
Sbjct: 126 EGGTYPLEVEALERVYT-DCPKPTSARRQQ---LLCECPILANIEPKQIKFSLFSVTKTL 181
Query: 432 LVGV 443
++ V
Sbjct: 182 VMAV 185
>04_03_0767 +
19389337-19389381,19390586-19390643,19390720-19390759,
19390859-19390926,19391007-19391081,19391161-19391216,
19391317-19391361,19391450-19391701,19391787-19391881,
19392395-19392485,19392578-19392688,19392788-19392982,
19393071-19393262
Length = 440
Score = 29.1 bits (62), Expect = 2.9
Identities = 15/48 (31%), Positives = 25/48 (52%)
Frame = -3
Query: 156 NDASCPS*SPRKWSCKRPKLSHQTPFFDVIHVKITPLTSPTPRQRQPE 13
++ S P +P K +PKL ++P + + + P TSPT Q P+
Sbjct: 161 SEDSTPKETPPKAEETKPKLEEKSPKAEPPKMPLPPKTSPTEPQLPPK 208
>12_02_0796 +
23224357-23224427,23225714-23225810,23226335-23227146,
23227593-23227619,23227620-23229624
Length = 1003
Score = 28.3 bits (60), Expect = 5.0
Identities = 11/22 (50%), Positives = 16/22 (72%)
Frame = -1
Query: 515 GGPKLLLDGLIKRFRKVGRLNV 450
GG K L++ L+ RK+GRLN+
Sbjct: 769 GGTKTLVNNLVSSLRKLGRLNL 790
>03_05_1112 +
30488678-30488806,30489047-30489228,30489310-30489505,
30490095-30491117
Length = 509
Score = 28.3 bits (60), Expect = 5.0
Identities = 14/49 (28%), Positives = 26/49 (53%)
Frame = +3
Query: 120 TYEEIKKDKKHRYVVFYIRDEKQIDVETVGERNAEYEQFLEDLQKGGTG 266
T +++ +D+ + ++ EK D E + E NA YE+ + L+ G G
Sbjct: 140 TKQKVAEDENRNLIDRWML-EKMKDAERLNEANAMYEEMVLKLKSAGVG 187
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,651,586
Number of Sequences: 37544
Number of extensions: 311795
Number of successful extensions: 1058
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 1017
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1040
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1454766756
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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