Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ceN-0961
(608 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_55463| Best HMM Match : OPA3 (HMM E-Value=0) 63 2e-10
SB_30343| Best HMM Match : No HMM Matches (HMM E-Value=.) 57 1e-08
SB_35589| Best HMM Match : No HMM Matches (HMM E-Value=.) 57 1e-08
SB_28028| Best HMM Match : Cofilin_ADF (HMM E-Value=2e-20) 53 2e-07
SB_14227| Best HMM Match : Cofilin_ADF (HMM E-Value=0.0013) 45 6e-05
SB_6657| Best HMM Match : No HMM Matches (HMM E-Value=.) 42 3e-04
SB_36002| Best HMM Match : Peptidase_A17 (HMM E-Value=9.3e-41) 32 0.32
SB_20964| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.32
SB_50916| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.55
SB_44895| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.97
SB_50709| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.3
SB_43377| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.3
SB_12736| Best HMM Match : Peptidase_A17 (HMM E-Value=3.1e-11) 29 2.2
SB_46360| Best HMM Match : EGF (HMM E-Value=0) 29 2.9
SB_6077| Best HMM Match : EGF (HMM E-Value=0) 29 2.9
SB_18417| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.9
SB_14080| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.9
SB_9510| Best HMM Match : Keratin_B2 (HMM E-Value=3.8e-05) 28 5.1
SB_18385| Best HMM Match : RVT_1 (HMM E-Value=0.2) 28 5.1
SB_3240| Best HMM Match : Sec8_exocyst (HMM E-Value=0.48) 28 5.1
SB_21898| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.0
SB_20553| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.0
>SB_55463| Best HMM Match : OPA3 (HMM E-Value=0)
Length = 387
Score = 62.9 bits (146), Expect = 2e-10
Identities = 41/146 (28%), Positives = 74/146 (50%), Gaps = 3/146 (2%)
Frame = +3
Query: 81 MASGVTVSDACKTTYEEIKKDKKH-RYVVFYIRDEKQIDVETVGERNAE--YEQFLEDLQ 251
M +G+ + + EIKK RY++F + ++K+ V + E +E L+DL
Sbjct: 247 MEAGLNIKGEVTDGWNEIKKAASGLRYIIFKMDEKKENVVFEKKKMKCECSHEDVLDDLP 306
Query: 252 KGGTGECRYGLFDFEYTHQCQGTSEASKKQKLFLMLWCPDTAKVKKKMLYFSLFDALKKS 431
E RY + +Y + E + + KL L+ WCPD ++K +M+ + F +KK
Sbjct: 307 ---ADEPRYIALNLDYKNV-----EGADRSKLVLIFWCPDNCEIKSRMVSAATFQDVKKK 358
Query: 432 LVGVQKYIQATDLSEAFYEAVQEKLR 509
G K ++ + SE +EA++E+L+
Sbjct: 359 CPGGAKCLEIQERSELSFEALKEELK 384
>SB_30343| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 140
Score = 57.2 bits (132), Expect = 1e-08
Identities = 39/144 (27%), Positives = 71/144 (49%), Gaps = 3/144 (2%)
Frame = +3
Query: 87 SGVTVSDACKTTYEEIKKDKKH-RYVVFYIRDEKQIDVETVGERNAE--YEQFLEDLQKG 257
+G+ + + EIK RY +F + ++K+ V + E ++ L+DL
Sbjct: 2 AGLNIKSDVTDGWNEIKMVASGLRYTIFKMDEKKENVVMEKKKMITECCHDDVLDDLP-- 59
Query: 258 GTGECRYGLFDFEYTHQCQGTSEASKKQKLFLMLWCPDTAKVKKKMLYFSLFDALKKSLV 437
T E RY + +Y ++ E +++ KL L+ WCPD +K KM+ + F + K
Sbjct: 60 -TDEPRYVALNLDYKNE-----EGAERSKLVLIFWCPDNCGIKNKMVSAATFKEVMKKCP 113
Query: 438 GVQKYIQATDLSEAFYEAVQEKLR 509
G K ++ D + +EA++EKL+
Sbjct: 114 GGAKCLEIQDRFDLSFEALKEKLK 137
>SB_35589| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 150
Score = 56.8 bits (131), Expect = 1e-08
Identities = 41/150 (27%), Positives = 70/150 (46%), Gaps = 11/150 (7%)
Frame = +3
Query: 87 SGVTVSDACKTTYEEIK-KDKKHRYVVFYIRDE----------KQIDVETVGERNAEYEQ 233
SG+ + D Y+ ++ K+K H++ F I D+ K++D T E A ++Q
Sbjct: 4 SGIKIDDESLHLYQTMQGKEKSHKFATFKISDDGKMVVIDHILKRVDTHTREEDRAIFDQ 63
Query: 234 FLEDLQKGGTGECRYGLFDFEYTHQCQGTSEASKKQKLFLMLWCPDTAKVKKKMLYFSLF 413
LE L E RY L+D + + + L + WC D A +KK+M+ +
Sbjct: 64 MLEKLSDS---EPRYILYDLNFPRK-----DGRAFHHLVYIFWCSDNAPIKKRMVSAATN 115
Query: 414 DALKKSLVGVQKYIQATDLSEAFYEAVQEK 503
+ LK V V+K Q D ++ Y+ + +K
Sbjct: 116 ELLKTKFV-VKKVFQINDRADLNYDDIADK 144
>SB_28028| Best HMM Match : Cofilin_ADF (HMM E-Value=2e-20)
Length = 151
Score = 52.8 bits (121), Expect = 2e-07
Identities = 39/150 (26%), Positives = 65/150 (43%), Gaps = 7/150 (4%)
Frame = +3
Query: 87 SGVTVSDACKTTYEEIKKDKKHRYVVFYIRDEKQIDV-----ETVGERNAEYEQ--FLED 245
SG+ V D + +K K H+Y +F I DE + V ++V E ++ F +
Sbjct: 4 SGIKVDDESLKLSQTMKSMKTHKYAIFKICDEANMVVIDQTFKSVVTNTREEDRAIFYQM 63
Query: 246 LQKGGTGECRYGLFDFEYTHQCQGTSEASKKQKLFLMLWCPDTAKVKKKMLYFSLFDALK 425
++K E RY L+D ++ + E L + WC D A ++KKM S D ++
Sbjct: 64 VEKLSDREPRYILYDMKFPRK----EEKRIFNNLVFISWCSDKAPIEKKMKLASTQDYVR 119
Query: 426 KSLVGVQKYIQATDLSEAFYEAVQEKLRAT 515
K + A D + Y+ + K T
Sbjct: 120 KKFSEATTSVNANDFDDLDYDEIAAKAEKT 149
>SB_14227| Best HMM Match : Cofilin_ADF (HMM E-Value=0.0013)
Length = 310
Score = 44.8 bits (101), Expect = 6e-05
Identities = 23/61 (37%), Positives = 33/61 (54%)
Frame = +3
Query: 303 HQCQGTSEASKKQKLFLMLWCPDTAKVKKKMLYFSLFDALKKSLVGVQKYIQATDLSEAF 482
H+ Q A FL C D A +KKKML S ++ LKK G++KY +A+++ E
Sbjct: 241 HKTQDHRSALSDLVFFLFDRCSDEAPIKKKMLAGSTWEYLKKKFDGLKKYFEASEICEMC 300
Query: 483 Y 485
Y
Sbjct: 301 Y 301
>SB_6657| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 183
Score = 42.3 bits (95), Expect = 3e-04
Identities = 32/118 (27%), Positives = 56/118 (47%), Gaps = 3/118 (2%)
Frame = +3
Query: 84 ASGVTVSDACKTTYEEIKK-DKKHRYVVFYIRDEKQIDVETVGERNAE--YEQFLEDLQK 254
++GV ++ + E+ K D RY++F + + K+ V + E +E L+DL
Sbjct: 4 SAGVNITREFTDGWNEMTKADSGLRYIIFKLDENKENVVFEKKKMKCECSHEDLLDDLP- 62
Query: 255 GGTGECRYGLFDFEYTHQCQGTSEASKKQKLFLMLWCPDTAKVKKKMLYFSLFDALKK 428
E RY +Y ++ E +K+ K+ L+ WCP+ + KM Y F+ L K
Sbjct: 63 --ADEPRYIGLILDYENK-----EGAKRSKVLLIFWCPENLNPRVKMPYAMTFNDLTK 113
>SB_36002| Best HMM Match : Peptidase_A17 (HMM E-Value=9.3e-41)
Length = 193
Score = 32.3 bits (70), Expect = 0.32
Identities = 18/52 (34%), Positives = 26/52 (50%), Gaps = 3/52 (5%)
Frame = +3
Query: 192 DVETVGERNAEYEQFLEDLQKGGT---GECRYGLFDFEYTHQCQGTSEASKK 338
D E GER + +L+DL++ C YG+ E T+ G +ASKK
Sbjct: 83 DEELTGERKKRWLSWLDDLKRVKEVRIARCVYGVSGAEVTYSLHGFGDASKK 134
>SB_20964| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 311
Score = 32.3 bits (70), Expect = 0.32
Identities = 18/52 (34%), Positives = 26/52 (50%), Gaps = 3/52 (5%)
Frame = +3
Query: 192 DVETVGERNAEYEQFLEDLQKGGT---GECRYGLFDFEYTHQCQGTSEASKK 338
D E GER + +L+DL++ C YG+ E T+ G +ASKK
Sbjct: 139 DEELTGERKKRWLSWLDDLKRVKEVRIARCVYGVSGAEVTYSLHGFGDASKK 190
>SB_50916| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1681
Score = 31.5 bits (68), Expect = 0.55
Identities = 18/52 (34%), Positives = 26/52 (50%), Gaps = 3/52 (5%)
Frame = +3
Query: 192 DVETVGERNAEYEQFLEDLQKGGT---GECRYGLFDFEYTHQCQGTSEASKK 338
D E GER + +L+DL++ C YG + E T+ G +ASKK
Sbjct: 422 DEELTGERKKRWLSWLDDLKRVKEVRIARCVYGGSEAEVTYSLHGFGDASKK 473
>SB_44895| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 237
Score = 30.7 bits (66), Expect = 0.97
Identities = 21/55 (38%), Positives = 28/55 (50%), Gaps = 3/55 (5%)
Frame = -2
Query: 361 HNIRKSFCFLLASDVPWHWCVYSKSNRPYLHSPVP-PFCRS--SRNCSYSALRSP 206
H+ + +C S V +C YS +RPY HSPV P+C S R YS + P
Sbjct: 95 HSWSRPYCH---SPVDRPYC-YSPVDRPYCHSPVDRPYCHSPVDRPYCYSPVDHP 145
Score = 30.3 bits (65), Expect = 1.3
Identities = 16/42 (38%), Positives = 24/42 (57%), Gaps = 1/42 (2%)
Frame = -2
Query: 364 HHNIRKSFCFLLASDVPWHWCVYSKSNRPYLHSPVP-PFCRS 242
H + + +C+ S V +C +S +RPY HSPV P+C S
Sbjct: 130 HSPVDRPYCY---SPVDHPYC-HSPVDRPYCHSPVDRPYCHS 167
>SB_50709| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 953
Score = 30.3 bits (65), Expect = 1.3
Identities = 14/38 (36%), Positives = 18/38 (47%), Gaps = 3/38 (7%)
Frame = -3
Query: 372 CPGTTTS---EKASVSC*PPTCPGTGACIQSQTGHICI 268
CP T EKA+V C P C G C++ G C+
Sbjct: 641 CPSGFTGQFCEKATVDCKPGACRNNGKCVEIPGGFQCL 678
>SB_43377| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 625
Score = 30.3 bits (65), Expect = 1.3
Identities = 19/41 (46%), Positives = 23/41 (56%)
Frame = -1
Query: 539 CKSCLLAIGGPKLLLDGLIKRFRKVGRLNVLLNSDKGLFQS 417
C +CLL G K L DGL +R G +NVLL D G +S
Sbjct: 348 CIACLLFGGSRKRLPDGLTRR----GDINVLLLGDPGTAKS 384
>SB_12736| Best HMM Match : Peptidase_A17 (HMM E-Value=3.1e-11)
Length = 597
Score = 29.5 bits (63), Expect = 2.2
Identities = 17/56 (30%), Positives = 27/56 (48%), Gaps = 3/56 (5%)
Frame = +3
Query: 180 EKQIDVETVGERNAEYEQFLEDLQKGGT---GECRYGLFDFEYTHQCQGTSEASKK 338
E ++ GER + +L+DL++ C YG+ E T+ G +ASKK
Sbjct: 222 EVRLGRRLTGERKKRWLSWLDDLKRVKEVRIARCVYGVSGAEVTYSLHGFGDASKK 277
>SB_46360| Best HMM Match : EGF (HMM E-Value=0)
Length = 352
Score = 29.1 bits (62), Expect = 2.9
Identities = 12/36 (33%), Positives = 18/36 (50%), Gaps = 1/36 (2%)
Frame = -3
Query: 372 CPGTTTSEKASVS-C*PPTCPGTGACIQSQTGHICI 268
CP T VS C C G+C+ +Q+G+ C+
Sbjct: 189 CPTGVTGRHCDVSICDSKPCRNNGSCVLTQSGYQCL 224
>SB_6077| Best HMM Match : EGF (HMM E-Value=0)
Length = 1165
Score = 29.1 bits (62), Expect = 2.9
Identities = 12/36 (33%), Positives = 18/36 (50%), Gaps = 1/36 (2%)
Frame = -3
Query: 372 CPGTTTSEKASVS-C*PPTCPGTGACIQSQTGHICI 268
CP T VS C C G+C+ +Q+G+ C+
Sbjct: 1002 CPTGVTGRHCDVSICDSKPCRNNGSCVLTQSGYQCL 1037
>SB_18417| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 441
Score = 28.7 bits (61), Expect = 3.9
Identities = 12/34 (35%), Positives = 15/34 (44%)
Frame = -3
Query: 372 CPGTTTSEKASVSC*PPTCPGTGACIQSQTGHIC 271
C GT ++K C C +G C QS G C
Sbjct: 211 CGGTNCTQKCGKDCQQVVCSASGKCDQSCDGEGC 244
>SB_14080| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1190
Score = 28.7 bits (61), Expect = 3.9
Identities = 14/52 (26%), Positives = 28/52 (53%), Gaps = 2/52 (3%)
Frame = +3
Query: 282 LFDFEYTHQCQGTSEASKKQKLFLMLWCPDTAKVKKKML--YFSLFDALKKS 431
+FD + H+ + + ++ L L LW PD + ++K + FS F+ ++ S
Sbjct: 1138 VFDDSFLHEVSHSGPSGRRIVLMLDLWHPDVSVAERKAICHLFSNFNWIESS 1189
>SB_9510| Best HMM Match : Keratin_B2 (HMM E-Value=3.8e-05)
Length = 500
Score = 28.3 bits (60), Expect = 5.1
Identities = 16/52 (30%), Positives = 25/52 (48%), Gaps = 1/52 (1%)
Frame = +2
Query: 443 SEVHSSDRPFGSVL*GRPREASGHRSPINRIYTR-ARDETEPGFRHFWPDDT 595
+E ++ P G V+ G ++ G I R + + A D+T R FW DT
Sbjct: 231 TEPYAEKTPLGWVIAGPVSDSEGGGKRILRAHVQEAEDDTNHNLRMFWEVDT 282
>SB_18385| Best HMM Match : RVT_1 (HMM E-Value=0.2)
Length = 351
Score = 28.3 bits (60), Expect = 5.1
Identities = 16/52 (30%), Positives = 25/52 (48%), Gaps = 1/52 (1%)
Frame = +2
Query: 443 SEVHSSDRPFGSVL*GRPREASGHRSPINRIY-TRARDETEPGFRHFWPDDT 595
+E ++ P G V+ G ++ G I R + + A D+T R FW DT
Sbjct: 12 TEPYAEKTPLGWVMAGPVSDSEGGGKRILRAHVSEAEDDTNHNLRMFWEVDT 63
>SB_3240| Best HMM Match : Sec8_exocyst (HMM E-Value=0.48)
Length = 643
Score = 28.3 bits (60), Expect = 5.1
Identities = 12/23 (52%), Positives = 14/23 (60%)
Frame = +1
Query: 217 TPNTNSSSRICRRAVPGNADMAC 285
+P T SSR C VPG+AD C
Sbjct: 14 SPRTGRSSRSCSIPVPGHADHHC 36
>SB_21898| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1084
Score = 27.5 bits (58), Expect = 9.0
Identities = 11/29 (37%), Positives = 15/29 (51%)
Frame = -2
Query: 598 PRVVRPEVSKTGFGFVASSCVNPVYWRSV 512
P V +PE FG ++S +P YW V
Sbjct: 742 PEVAKPERKIPLFGIMSSDSADPFYWMRV 770
>SB_20553| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 445
Score = 27.5 bits (58), Expect = 9.0
Identities = 13/32 (40%), Positives = 16/32 (50%)
Frame = -2
Query: 304 CVYSKSNRPYLHSPVPPFCRSSRNCSYSALRS 209
CVY PY+ S +PP +S S LRS
Sbjct: 292 CVYGWVALPYMSSTLPPVAYTSSGLSAGPLRS 323
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,162,658
Number of Sequences: 59808
Number of extensions: 367486
Number of successful extensions: 1302
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 1161
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1293
length of database: 16,821,457
effective HSP length: 79
effective length of database: 12,096,625
effective search space used: 1487884875
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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