Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ceN-0959
         (321 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT011431-1|AAR99089.1| 1120|Drosophila melanogaster RH64806p pro...    28   3.1  
BT021312-1|AAX33460.1| 1215|Drosophila melanogaster RE14947p pro...    27   5.4  
AE014134-2679|AAN10933.1| 1170|Drosophila melanogaster CG12455-P...    27   5.4  
AE014134-2678|AAF53505.2| 2190|Drosophila melanogaster CG12455-P...    27   5.4  
AJ507731-1|CAD45644.1|  157|Drosophila melanogaster thioredoxinT...    27   7.1  
AE014298-718|AAF46018.2|  157|Drosophila melanogaster CG3315-PA ...    27   7.1  
BT011435-1|AAR99093.1|  103|Drosophila melanogaster RH18724p pro...    26   9.4  
AY566036-1|AAS75046.1|  288|Drosophila melanogaster 5-HT2 protein.     26   9.4  
AE014297-4296|AAN14306.1|  103|Drosophila melanogaster CG31047-P...    26   9.4  
AE014296-1219|AAF50588.3| 1120|Drosophila melanogaster CG32381-P...    26   9.4  

>BT011431-1|AAR99089.1| 1120|Drosophila melanogaster RH64806p
           protein.
          Length = 1120

 Score = 27.9 bits (59), Expect = 3.1
 Identities = 15/27 (55%), Positives = 17/27 (62%)
 Frame = +3

Query: 219 SISLIFYLPDIGRVIRQRRDSRGGPVP 299
           S  L F   + GR  R+RRDS GGPVP
Sbjct: 168 SFRLSFKRREAGR--RERRDSLGGPVP 192


>BT021312-1|AAX33460.1| 1215|Drosophila melanogaster RE14947p
           protein.
          Length = 1215

 Score = 27.1 bits (57), Expect = 5.4
 Identities = 11/32 (34%), Positives = 21/32 (65%)
 Frame = +3

Query: 219 SISLIFYLPDIGRVIRQRRDSRGGPVPNSPYS 314
           SIS+ F+   + RV  +++D    P+PN+P++
Sbjct: 632 SISVKFHYDKMRRVSEEKQDYFFAPLPNTPFT 663


>AE014134-2679|AAN10933.1| 1170|Drosophila melanogaster CG12455-PB,
           isoform B protein.
          Length = 1170

 Score = 27.1 bits (57), Expect = 5.4
 Identities = 11/32 (34%), Positives = 21/32 (65%)
 Frame = +3

Query: 219 SISLIFYLPDIGRVIRQRRDSRGGPVPNSPYS 314
           SIS+ F+   + RV  +++D    P+PN+P++
Sbjct: 587 SISVKFHYDKMRRVSEEKQDYFFAPLPNTPFT 618


>AE014134-2678|AAF53505.2| 2190|Drosophila melanogaster CG12455-PA,
           isoform A protein.
          Length = 2190

 Score = 27.1 bits (57), Expect = 5.4
 Identities = 11/32 (34%), Positives = 21/32 (65%)
 Frame = +3

Query: 219 SISLIFYLPDIGRVIRQRRDSRGGPVPNSPYS 314
           SIS+ F+   + RV  +++D    P+PN+P++
Sbjct: 594 SISVKFHYDKMRRVSEEKQDYFFAPLPNTPFT 625


>AJ507731-1|CAD45644.1|  157|Drosophila melanogaster thioredoxinT
           protein.
          Length = 157

 Score = 26.6 bits (56), Expect = 7.1
 Identities = 14/41 (34%), Positives = 22/41 (53%)
 Frame = +1

Query: 55  NTNILFLVNMNYLLTFPNLKVVNALAYFISCNNIIL*KYLQ 177
           N +I    N+N + TF  +K  N L  F+ CN+  L K ++
Sbjct: 63  NEDITVEYNVNSMPTFVFIKGGNVLELFVGCNSDKLAKLME 103


>AE014298-718|AAF46018.2|  157|Drosophila melanogaster CG3315-PA
           protein.
          Length = 157

 Score = 26.6 bits (56), Expect = 7.1
 Identities = 14/41 (34%), Positives = 22/41 (53%)
 Frame = +1

Query: 55  NTNILFLVNMNYLLTFPNLKVVNALAYFISCNNIIL*KYLQ 177
           N +I    N+N + TF  +K  N L  F+ CN+  L K ++
Sbjct: 63  NEDITVEYNVNSMPTFVFIKGGNVLELFVGCNSDKLAKLME 103


>BT011435-1|AAR99093.1|  103|Drosophila melanogaster RH18724p
           protein.
          Length = 103

 Score = 26.2 bits (55), Expect = 9.4
 Identities = 14/44 (31%), Positives = 24/44 (54%), Gaps = 2/44 (4%)
 Frame = +1

Query: 64  ILFLVNMNYLLTFPNL--KVVNALAYFISCNNIIL*KYLQIFLQ 189
           I +L N+ Y + F  L   +   L YF++CN+ +   +L + LQ
Sbjct: 5   IQYLSNLYYPMHFLKLILGIQKILVYFLACNSKVFNDFLPVQLQ 48


>AY566036-1|AAS75046.1|  288|Drosophila melanogaster 5-HT2 protein.
          Length = 288

 Score = 26.2 bits (55), Expect = 9.4
 Identities = 10/30 (33%), Positives = 19/30 (63%)
 Frame = +1

Query: 52  TNTNILFLVNMNYLLTFPNLKVVNALAYFI 141
           ++  +L LVN   ++  PN+ V+N  A+F+
Sbjct: 69  SSITVLGLVNEKNIMPXPNICVINNXAFFV 98


>AE014297-4296|AAN14306.1|  103|Drosophila melanogaster CG31047-PA
           protein.
          Length = 103

 Score = 26.2 bits (55), Expect = 9.4
 Identities = 14/44 (31%), Positives = 24/44 (54%), Gaps = 2/44 (4%)
 Frame = +1

Query: 64  ILFLVNMNYLLTFPNL--KVVNALAYFISCNNIIL*KYLQIFLQ 189
           I +L N+ Y + F  L   +   L YF++CN+ +   +L + LQ
Sbjct: 5   IQYLSNLYYPMHFLKLILGIQKILVYFLACNSKVFNDFLPVQLQ 48


>AE014296-1219|AAF50588.3| 1120|Drosophila melanogaster CG32381-PA
           protein.
          Length = 1120

 Score = 26.2 bits (55), Expect = 9.4
 Identities = 14/27 (51%), Positives = 17/27 (62%)
 Frame = +3

Query: 219 SISLIFYLPDIGRVIRQRRDSRGGPVP 299
           S  L F   + GR  R++RDS GGPVP
Sbjct: 168 SFRLSFKRREAGR--REQRDSLGGPVP 192


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,675,947
Number of Sequences: 53049
Number of extensions: 180423
Number of successful extensions: 430
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 430
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 430
length of database: 24,988,368
effective HSP length: 74
effective length of database: 21,062,742
effective search space used: 674007744
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)